Contig 010932:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007H24Sequence307010932 (5)ref|XP_009601270.1|98.2PREDICTED: uncharacterized protein LOC104096590 [Nicotiana tomentosiformis]757007250 (4)ref|XP_009763074.1|3e-73PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Nicotian
JMSF007O18Sequence304010932 (5)ref|XP_009601270.1|98.2PREDICTED: uncharacterized protein LOC104096590 [Nicotiana tomentosiformis]752007250 (4)ref|XP_009763074.1|6e-73PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Nicotian
JMSF008H24Sequence237010932 (5)ref|XP_009601270.1|65.5PREDICTED: uncharacterized protein LOC104096590 [Nicotiana tomentosiformis]752007250 (4)ref|XP_009763074.1|2e-73PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Nicotian
JMSF020K22Sequence702010932 (5)ref|XP_011086106.1|1e-40PREDICTED: trafficking protein particle complex subunit 13 [Sesamum indicum]772017134ref|XP_009763074.1|1e-75PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Nicotian
JMSF050N03Sequence696010932 (5)ref|XP_011086106.1|1e-40PREDICTED: trafficking protein particle complex subunit 13 [Sesamum indicum]752007250 (4)ref|XP_009790216.1|1e-50PREDICTED: trafficking protein particle complex subunit 13-like, partial [Nicot

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF020K22+ CTGATCCAAATGCATTCATAGAGTGCCTAATATG
JMSF050N03+ AGCTGATCCAAATGCATTCATAGAGTGCCTAATATG
                      ____________________________________________________________
consensus AGCTGATCCAAATGCATTCATAGAGTGCCTAATATG
 
. : . : . : . : . : . :
JMSF020K22+ TGCAACAGTTCATTGCAAAGAACAAATCAACCAATCATTCGTCAATCCACCTTGATTACA
JMSF050N03+ TGCAACAGTTCATTGCAAAGAACAAATCAACCAATCATTCGTCAATCCACCTTGATTACA
                      ____________________________________________________________
consensus TGCAACAGTTCATTGCAAAGAACAAATCAACCAATCATTCGTCAATCCACCTTGATTACA
 
. : . : . : . : . : . :
JMSF020K22+ ATATCCCTGACTTCGAAACTCGAACTGTTGTTTATACTTATATAACTGCAGAACGTCTCC
JMSF050N03+ ATATCCCTGACTTCGAAACTCGAACTGTTGTTTATACTTATATAACTGCAGAACGTCTCC
                      ____________________________________________________________
consensus ATATCCCTGACTTCGAAACTCGAACTGTTGTTTATACTTATATAACTGCAGAACGTCTCC
 
. : . : . : . : . : . :
JMSF020K22+ CCCAGATATATTGCCCTGCAAGGACATCTCAATTTCTCATTAATTAAAATACAAAAAACA
JMSF050N03+ CCCAGATATATTGCCCTGCAAGGACATCTCAATTTCTCATTAATTAAAATACAAAAAACA
                      ____________________________________________________________
consensus CCCAGATATATTGCCCTGCAAGGACATCTCAATTTCTCATTAATTAAAATACAAAAAACA
 
. : . : . : . : . : . :
JMSF020K22+ CTACTAAATCAGGATAGTGTCAGGCAATGTATATGGTATAGAGAGAGCGAGGATGGAAAA
JMSF050N03+ CTACTAAATCAGGATAGTGTCAGGCAATGTATATGGTATAGAGAGAGCGAGGATGGAAAA
                      ____________________________________________________________
consensus CTACTAAATCAGGATAGTGTCAGGCAATGTATATGGTATAGAGAGAGCGAGGATGGAAAA
 
. : . : . : . : . : . :
JMSF020K22+ CTAACCCGAAAGACTGAGGAAGGACGAGGAGGCCAGGTAGGCCGACGGATTCGGAGGACT
JMSF050N03+ CTAACCCGAAAGACTGAGGAAGGACGAGGAGGCCAGGTAGGCCGACGGATTCGGAGGACT
                      ____________________________________________________________
consensus CTAACCCGAAAGACTGAGGAAGGACGAGGAGGCCAGGTAGGCCGACGGATTCGGAGGACT
 
. : . : . : . : . : . :
JMSF020K22+ GTTCGAGGAGGAATCTGGAGCGGTAGGAGAGATCGGAGGGGTCAACGACGTTGGGGCCGG
JMSF050N03+ GTTCGAGGAGGAATCTGGAGCGGTAGGAGAGATCGGAGGGGTCAACGACGTTGGGGCCGG
                      ____________________________________________________________
consensus GTTCGAGGAGGAATCTGGAGCGGTAGGAGAGATCGGAGGGGTCAACGACGTTGGGGCCGG
 
. : . : . : . : . : . :
JMSF020K22+ CGTTGACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
JMSF007H24+ TTGACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
JMSF007O18+ ACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
JMSF050N03+ CGTTGACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
                      ____________________________________________________________
consensus CGTTGACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
 
. : . : . : . : . : . :
JMSF020K22+ ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
JMSF007H24+ ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
JMSF007O18+ ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
JMSF008H24+ CGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
JMSF050N03+ ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
                      ____________________________________________________________
consensus ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
 
. : . : . : . : . : . :
JMSF020K22+ GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
JMSF007H24+ GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
JMSF007O18+ GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
JMSF008H24+ GTGATGGCNTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
JMSF050N03+ GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
                      ____________________________________________________________
consensus GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
 
. : . : . : . : . : . :
JMSF020K22+ TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
JMSF007H24+ TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
JMSF007O18+ TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
JMSF008H24+ TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
JMSF050N03+ TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
                      ____________________________________________________________
consensus TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
 
. : . : . : . : . : . :
JMSF020K22+ TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGA
JMSF007H24+ TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGA
JMSF007O18+ TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGA
JMSF008H24+ TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGA
JMSF050N03+ TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGACCC
                      ____________________________________________________________
consensus TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGACCC