Contig 010920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A19Sequence539010920 (14)ref|XP_009587203.1|2e-63PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana tomentosiformis]704004053 (10)ref|XP_006357690.1|1e-91PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Solanum tuberosum]
JMFF028C07Sequence438010920 (14)ref|XP_009587203.1|3e-49PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana tomentosiformis]486004053 (10)emb|CDP16382.1|4e-42unnamed protein product [Coffea canephora]
JMFF031B12Sequence526010920 (14)ref|XP_009587203.1|1e-62PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana tomentosiformis]782004053 (10)ref|XP_006357690.1|1e-91PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Solanum tuberosum]
JMFN005I01Sequence625010920 (14)ref|XP_009587203.1|1e-82PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana tomentosiformis]
JMSF001I24Sequence252010920 (14)ref|XP_009770088.1|2e-27PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana sylvestris]
JMSF003C11Sequence322010920 (14)ref|XP_004240171.1|4e-40PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Solanum lycopersicum]727004053 (10)ref|XP_006357690.1|7e-90PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Solanum tuberosum]
JMSF008D21Sequence345010920 (14)ref|XP_009587203.1|4e-45PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana tomentosiformis]729004053 (10)ref|XP_006354418.1|6e-108PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Solanum tuberosum]
JMSF008O06Sequence292010920 (14)gb|AGO59892.1|7e-37hydroxyphenylpyruvate dioxygenase [Perilla frutescens]764004053 (10)ref|XP_004243609.1|4e-89PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Solanum lycopersicum]
JMSF009O06Sequence171010920 (14)ref|XP_009770088.1|2e-22PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana sylvestris]630004053 (10)ref|XP_004243609.1|8e-73PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Solanum lycopersicum]
JMSF017P21Sequence337010920 (14)ref|XP_004240171.1|1e-43PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Solanum lycopersicum]789004053 (10)ref|XP_006354418.1|5e-104PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Solanum tuberosum]
JMSF033L18Sequence683010920 (14)ref|XP_009587203.1|7e-90PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana tomentosiformis]705004053 (10)ref|XP_004243609.1|5e-85PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Solanum lycopersicum]
JMSF037I09Sequence681010920 (14)ref|XP_009587203.1|4e-83PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana tomentosiformis]
JMSF048N06Sequence690010920 (14)ref|XP_009587203.1|2e-92PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana tomentosiformis]
JMSF049O10Sequence691010920 (14)ref|XP_009587203.1|6e-82PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048N06+ GGCGTGGTCGAGGCGG
                      ____________________________________________________________
consensus GGCGTGGTCGAGGCGG
 
. : . : . : . : . : . :
JMFN005I01+ TAGGATGCGGTTCCGTCCATGGGTTCGAAGCCTTGT
JMSF048N06+ CGGATTCCGTAATCGAGGTCTTGNTAGGATGCGGTTCCGTCCATGGGTTCGAAGCCTGGT
JMSF033L18+ TCTTGGTAGGATGCGGTTCCGTCCATGGGTTCGAAGCCTGGT
JMSF037I09+ TCTTGGTAGGATGCGGTTCCGTCCATGGGTTCGGAGCCTGGT
JMSF049O10+ ATGCGGTTCCGTCCATGGNTTCGAAGCCTGGT
                      ____________________________________________________________
consensus CGGATTCCGTAATCGAGGTCTTGGTAGGATGCGGTTCCGTCCATGGGTTCGAAGCCTGGT
 
. : . : . : . : . : . :
JMFN005I01+ AGGAATGTTGTGACGGCGGAGGGGTCGGAGAGATAGCTGATGAATCGGAGCACGACGTCG
JMSF048N06+ AGGAATGTTGTGACGGCGGAGGGGTCGGAGAGATAGCTGATGAATCGGAGCACGACGTCG
JMSF033L18+ AGGAATGTTGTGACGGCGGAGGGGTCGGAGAGATAGCTGATGAATCGGAGCACGACGTCG
JMSF037I09+ AGGAATGTTGTGACGGCGGAGGGGTCGGAGAGATAGCTGATGAATCGGAGCACGACGTCG
JMSF049O10+ AGGAATGTTGTGACGGCGGAGGGGTCGGAGAGATAGCTGATGAATCGGAGCACGACGTCG
                      ____________________________________________________________
consensus AGGAATGTTGTGACGGCGGAGGGGTCGGAGAGATAGCTGATGAATCGGAGCACGACGTCG
 
. : . : . : . : . : . :
JMFN005I01+ CCGTAGAGGTGGACTTCGGCGAGGACTACTTGGTTGTTGAGTGTAACGGGCTCCGACACG
JMSF048N06+ CCGTAGAGGTGGACTTCGGCGAGGACTACTTGGTTGTTGAGTGTAACGGGCTCCGACACG
JMSF033L18+ CCGTAGAGGTGGACTTCGGCGAGGACTACTTGGTTGTTGAGTGTAACGGGCTCCGACACG
JMSF037I09+ CCGTAGAGGTGGACTTCGGCGAGGACTACTTGGTTGTTGAGTGTAACGGGCTCCGACACG
JMFF031B12+ CTTGGTTGTTGAGTGTAACGGGCTCCGACACG
JMFF007A19+ GGCGAGGACTACTTGGTTGTTGAGTGTAACGGGCTCCGACACG
JMSF049O10+ CCGTAGAGGTGGACTTCGGCGAGGACTACTTGGTTGTTGAGTGTAACGGGCTCCGACACG
                      ____________________________________________________________
consensus CCGTAGAGGTGGACTTCGGCGAGGACTACTTGGTTGTTGAGTGTAACGGGCTCCGACACG
 
. : . : . : . : . : . :
JMFN005I01+ GGTTTCGCGCCGCGGGAGACGCTGGCGGAGAAGGCGGCCTGAGTGTCCTCAACTACCAGG
JMSF048N06+ GGTTTCGCGCCGCGGGAGACGCTGGCGGAGAAGGCGGCCTGAGTGTCCTCAACTACCAGG
JMSF033L18+ GGTTTCGCGCCGCGGGAGACGCTGGCGGAGAAGGCGGCCTGAGTGTCCTCAACTACCAGG
JMSF037I09+ GGTTTCGCGCCGCGGGAGACGCTGGCGGAGAAGGCGGCCTGAGTGTCCTCAACTACCAGG
JMFF031B12+ GGTTTCGCGCCGCGGGAGACGCTGGCGGAGAAGGCGGCCTGAGTGTCCTCAACTACCAGG
JMFF028C07+ G
JMFF007A19+ GGTTTCGCGCCGCGGGAGACGCTGGCGGAGAAGGCGGCCTGAGTGTCCTCAACTACCAGG
JMSF049O10+ GGTTTCGCGCCGCGGGAGACGCTGGCGGAGAAGGCGGCCTGAGTGTCCTCAACTACCAGG
                      ____________________________________________________________
consensus GGTTTCGCGCCGCGGGAGACGCTGGCGGAGAAGGCGGCCTGAGTGTCCTCAACTACCAGG
 
. : . : . : . : . : . :
JMFN005I01+ GCGACCGCGCGGACGCCGAGTCCGTGGGTGGCGTTGAAGGAGCGGTGGGCGGAGGCGGAG
JMSF048N06+ GCGACCGCGCGGACGCCGAGTCCGTGGGTGGCGTTGAAGGAGCGGTGGGCGGAGGCGGAG
JMSF033L18+ GCGACCGCGCGGACGCCGAGTCCGTGGGTGGCGTTGAAGGAGCGGTGGGCGGAGGCGGAG
JMSF037I09+ GCGACCGCGCGGACGCCGAGTCCGTGGGTGGCGTTGAAGGAGCGGTGGGCGGAGGCGGAG
JMFF031B12+ GCGACCGCGCGGACGCCGAGTCCGTGGGTGGCGTTGAAGGAGCGGTGGGCGGAGGCGGAG
JMFF028C07+ GCGACCGCGCGGACGCCGAGTCCGTGGGTGGCGTTGAAGGAGCGGTGGGCGGAGGCGGAG
JMFF007A19+ GCGACCGCGCGGACGCCGAGTCCGTGGGTGGCGTTGAAGGAGCGGTGGGCGGAGGCGGAG
JMSF049O10+ GCGACCGCGCGGACGCCGAGTCCGTGGGTGGCGTTGAAGGAGCGGTGGGCGGAGGCGGAG
                      ____________________________________________________________
consensus GCGACCGCGCGGACGCCGAGTCCGTGGGTGGCGTTGAAGGAGCGGTGGGCGGAGGCGGAG
 
. : . : . : . : . : . :
JMFN005I01+ AAGGAGGGGATGGCGGCGGAGGCGGGGTTGGAAATGGAGGACGCATAGGGAGCTGTGAAG
JMSF048N06+ AAGGAGGGGATGGCGGCGGAGGCGGGGTTGGAAATGGAGGACGCATAGGGAGCTGTGAAG
JMSF033L18+ AAGGAGGGGATGGCGGCGGAGGCGGGGTTGGAAATGGAGGACGCATAGGGAGCTGTGAAG
JMSF003C11+ GAAG
JMSF037I09+ AAGGAGGGGATGGCGGCGGAGGCGGGGTTGGAAATGGAGGACGCATAGGGAGCTGTGAAG
JMFF031B12+ AAGGAGGGGATGGCGGCGGAGGCGGGGTTGGAAATGGAGGACGCATAGGGAGCTGTGAAG
JMFF028C07+ AAGGAGGGGATGGCGGCGGAGGCGGGGTTGGAAATGGAGGACGCATAGGGAGCTGTGAAG
JMSF008D21+ GAAATGGAGGACGCATAGGGAGCTGTGAAG
JMFF007A19+ AAGGAGGGGATGGCGGCGGAGGCGGGGTTGGAAATGGAGGACGCATAGGGAGCTGTGAAG
JMSF017P21+ CGCATAGGGAGCTGTGAAG
JMSF049O10+ AAGGAGGGGATGGCGGCGGAGGCGGGGTTGGAAATGGAGGACGCATAGGGAGCTGTGAAG
                      ____________________________________________________________
consensus AAGGAGGGGATGGCGGCGGAGGCGGGGTTGGAAATGGAGGACGCATAGGGAGCTGTGAAG
 
. : . : . : . : . : . :
JMFN005I01+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMSF008O06+ AAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMSF009O06+ AGCGCGTAGGAGATAAGAAGCGTGANCGGAGTTTTCC
JMSF048N06+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMSF033L18+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMSF003C11+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMSF037I09+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMFF031B12+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMFF028C07+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMSF008D21+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMFF007A19+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMSF017P21+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
JMSF049O10+ AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
                      ____________________________________________________________
consensus AGGAACTGAAGCTCGCCGCCGGAAGCGCGTAGGAGATAAGAAGCGTGAGCGGAG-TTTCC
 
. : . : . : . : . : . :
JMFN005I01+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF008O06+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF009O06+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF048N06+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF033L18+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF003C11+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF001I24+ AGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF037I09+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMFF031B12+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMFF028C07+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF008D21+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMFF007A19+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF017P21+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
JMSF049O10+ GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
                      ____________________________________________________________
consensus GGTGGAAAGATCGGATTTCGCGGCAATGGGCATTCCCAGCGCCCAGGAGAAGCGGCGGGC
 
. : . : . : . : . : . :
JMFN005I01+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF008O06+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF009O06+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF048N06+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF033L18+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF003C11+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF001I24+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF037I09+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMFF031B12+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMFF028C07+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF008D21+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMFF007A19+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF017P21+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
JMSF049O10+ AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
                      ____________________________________________________________
consensus AGTGTTAGTAGCATCGCCGCACCAGAACTCCACATGGTGGAAGCGTTTCACGGAGAAGTG
 
. : . : . : . : . : . :
JMFN005I01+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMSF008O06+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMSF009O06+ GTCGGATTTGGGAT
JMSF048N06+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMSF033L18+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMSF003C11+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMSF001I24+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMSF037I09+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMFF031B12+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMFF028C07+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMSF008D21+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMFF007A19+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMSF017P21+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
JMSF049O10+ GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
                      ____________________________________________________________
consensus GTCGGATTTGGGATTAACACGAACGAAATCCTTGAAACCCACCAGCTTGAAGCCGCCGTT
 
. : . : . : . : . : . :
JMFN005I01+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCA
JMSF008O06+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMSF048N06+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMSF033L18+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMSF003C11+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMSF001I24+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMSF037I09+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTACCCATGACTTCTGTTAA
JMFF031B12+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMFF028C07+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMSF008D21+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMFF007A19+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMSF017P21+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
JMSF049O10+ CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
                      ____________________________________________________________
consensus CTCCGGCGTGGAGTGGTGGTTGACGGAGGAGGAAGTCTCTTTGCCCATGACTTCTGTTAA
 
. : . : . : . : . : . :
JMSF008O06+ TTTTTCTGAACTC
JMSF048N06+ TTTTTCTGAACTC
JMSF033L18+ TTTTTCTGAACTCTAACTC
JMSF003C11+ TTTTTCTGAACTCTAACTC
JMSF001I24+ TTTTTCTGAACTCTAACTC
JMSF037I09+ TTTTTCTGAACTCTAACTC
JMFF031B12+ TTTTTCTGAACTCT
JMFF028C07+ TTTTTCTGAACTCT
JMSF008D21+ TTTTTCTGAACTCT
JMFF007A19+ TTTTTCTGAACTCTAAC
JMSF017P21+ TTTTTCTGAACTCTAAC
JMSF049O10+ TTTTTCTGAACTCTAACTGGAAACGATATGTTCTGGCCTGTCATTTATACACGTATCGCC
                      ____________________________________________________________
consensus TTTTTCTGAACTCTAACTCGAAACGATATGTTCTGGCCTGTCATTTATACACGTATCGCC