Contig 010918:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009L06Sequence370010918 (6)ref|XP_009603743.1|2e-23PREDICTED: mitogen-activated protein kinase kinase 2-like [Nicotiana tomentosif711010918 (6)ref|XP_008242181.1|1e-40PREDICTED: mitogen-activated protein kinase kinase 2 [Prunus mume]
JMSF024M17Sequence680010918 (6)emb|CDP03128.1|7e-71unnamed protein product [Coffea canephora]760007238 (4)ref|XP_009622981.1|3e-62PREDICTED: mitogen-activated protein kinase kinase 2-like [Nicotiana tomentosif
JMSF047J19Sequence705010918 (6)emb|CDP03128.1|8e-86unnamed protein product [Coffea canephora]823007238 (4)ref|XP_009622981.1|2e-104PREDICTED: mitogen-activated protein kinase kinase 2-like [Nicotiana tomentosif
JMSF049J23Sequence670010918 (6)ref|XP_009603743.1|8e-61PREDICTED: mitogen-activated protein kinase kinase 2-like [Nicotiana tomentosif731007238 (4)ref|XP_009622981.1|4e-70PREDICTED: mitogen-activated protein kinase kinase 2-like [Nicotiana tomentosif
JMSF050I18Sequence711010918 (6)ref|XP_009603743.1|8e-121PREDICTED: mitogen-activated protein kinase kinase 2-like [Nicotiana tomentosif722007238 (4)ref|XP_009622981.1|8e-86PREDICTED: mitogen-activated protein kinase kinase 2-like [Nicotiana tomentosif

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009L06- ATAGATATATTCCGGTTG
                      ____________________________________________________________
consensus ATAGATATATTCCGGTTG
 
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rJMSF009L06- GTCCATCATTTAGGTAGTATTTTTTGTTTTAATTTTGTGTTTTTTGCATTGATTTGATTA
                      ____________________________________________________________
consensus GTCCATCATTTAGGTAGTATTTTTTGTTTTAATTTTGTGTTTTTTGCATTGATTTGATTA
 
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rJMSF009L06- TAGTTTCCAGAAAAGAAGAATGTCTAAGCAGATAGAGTTGTTGCTGGAAGAAACAAGAAA
                      ____________________________________________________________
consensus TAGTTTCCAGAAAAGAAGAATGTCTAAGCAGATAGAGTTGTTGCTGGAAGAAACAAGAAA
 
. : . : . : . : . : . :
rJMSF009L06- CAGTTGAAGACTTGAAATTAAATGACCATAAATTTGCTTGCTGAGGGGAGCTATGGCAGG
                      ____________________________________________________________
consensus CAGTTGAAGACTTGAAATTAAATGACCATAAATTTGCTTGCTGAGGGGAGCTATGGCAGG
 
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rJMSF009L06- TAGGTGAGTCGCTGATTGAAGATAGAAATGCAGGTGATCTTGATCGCGGTTAGATCCACA
                      ____________________________________________________________
consensus TAGGTGAGTCGCTGATTGAAGATAGAAATGCAGGTGATCTTGATCGCGGTTAGATCCACA
 
. : . : . : . : . : . :
rJMSF009L06- CAAGGCCCGAGTAGGAGAAGAGCATTGCGTTATGAGAACATGAAGGGAGATTCGCGCTAA
                      ____________________________________________________________
consensus CAAGGCCCGAGTAGGAGAAGAGCATTGCGTTATGAGAACATGAAGGGAGATTCGCGCTAA
 
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rJMSF009L06- AGGTTGAATAGAACCGTTCGTTCGTTTTTAACTCAAAATGTTGCAGGTGGAGGCCTTACA
                      ____________________________________________________________
consensus AGGTTGAATAGAACCGTTCGTTCGTTTTTAACTCAAAATGTTGCAGGTGGAGGCCTTACA
 
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rJMSF009L06- GCAGTAAAGTAAGATGCAAGATCAATATCCAGGTGATCGTACATACTGATGAACGGGTGC
                      ____________________________________________________________
consensus GCAGTAAAGTAAGATGCAAGATCAATATCCAGGTGATCGTACATACTGATGAACGGGTGC
 
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rJMSF009L06- CTCATTAACTCATTTGCTGACAGTCTCTTTTTCGGGTCCTTCTGCACGCATTTAGAGATG
                      ____________________________________________________________
consensus CTCATTAACTCATTTGCTGACAGTCTCTTTTTCGGGTCCTTCTGCACGCATTTAGAGATG
 
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rJMSF009L06- AAAGAACAGAACTCTGGAGACATATAATTGTAGGTGCCAACAAAGGTATTGGCCGCTCCA
JMSF050I18+ CAAAGGTATTGGCCGCTCCA
                      ____________________________________________________________
consensus AAAGAACAGAACTCTGGAGACATATAATTGTAGGTGCCAACAAAGGTATTGGCCGCTCCA
 
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rJMSF009L06- GATGTGCTTGTTAGTACAACACTAACACCGAAATCGGTTATCTTGACATCACCTCTATGG
JMSF050I18+ GATGTGCTTGTTAGTACAACACTAACACCGAAATCGGTTATCTTGACATCACCTCTATGG
                      ____________________________________________________________
consensus GATGTGCTTGTTAGTACAACACTAACACCGAAATCGGTTATCTTGACATCACCTCTATGG
 
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rJMSF009L06- TTTATCAGCAAATTTGAAGGCTTCAAGTCTCTGTGAATGATATGTTTTTCATGGTGGAGA
JMSF024M17+ AATGATATGTTTTTCATGATGGAGA
JMSF050I18+ TTTATCAGCAAATTTGAAGGCTTCAAGTCTCTGTGAATGATATGTTTTTCATGGTGGAGA
                      ____________________________________________________________
consensus TTTATCAGCAAATTTGAAGGCTTCAAGTCTCTGTGAATGATATGTTTTTCATGGTGGAGA
 
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rJMSF009L06- TACCACAAGCCCTTGAGTACCTGCTTGCAGATA
JMSF024M17+ TACCACAAGCCCTTGAGTACCTGCTTGCAGATAGCAGCAAGATATGGTTCCGGAATTCTT
JMSF050I18+ TACCACAAGCCCTTGAGTACCTGCTTGCAGATAGCTGCAAGATATGGTTCCGGAATTCTT
                      ____________________________________________________________
consensus TACCACAAGCCCTTGAGTACCTGCTTGCAGATAGCTGCAAGATATGGTTCCGGAATTCTT
 
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JMSF024M17+ TTGACTATTTTCAAGAAATCCTGAAGAGACCCGCCATCCATGTACTCCAAGATTATGGAG
JMSF050I18+ TTGACTATTTTCAAGAAATCCTGAAGAGATCCGCCATCCATGTACTCCAAGATTAAGGAG
JMSF049J23+ AGATTAAGGAG
                      ____________________________________________________________
consensus TTGACTATTTTCAAGAAATCCTGAAGAGATCCGCCATCCATGTACTCCAAGATTAAGGAG
 
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JMSF024M17+ ATGGCACCGTTATCAAAAAACGCTTCGTAACATATTACAACATAAGGGCATTGCGATGAT
JMSF050I18+ ATGGCACCATTATCAAAAAACGCTTCGTAACATATTACCACATAAGGGCACTGCGATGAT
JMSF049J23+ ATGGCACCATTATCAAAAAACGCTTCGTAACATATTACCACATAAGGGCACTGCGATGAT
                      ____________________________________________________________
consensus ATGGCACCATTATCAAAAAACGCTTCGTAACATATTACCACATAAGGGCACTGCGATGAT
 
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JMSF024M17+ TGGTTAATTCTCAGTTCCTGTGCTATATGCCTGCGAATAGACTCTTCAATATTCATTTGA
JMSF050I18+ TGGTTAATTCTCAGTTCCTGTGCTATATGCCTGCGAATAGACTCTTCAATATTCATTTGA
JMSF049J23+ TGGTTAATTCTCAGTTCCTGTGCTATATGCCTGCGAATAGACTCTTCAATATTCATTTGA
                      ____________________________________________________________
consensus TGGTTAATTCTCAGTTCCTGTGCTATATGCCTGCGAATAGACTCTTCAATATTCATTTGA
 
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JMSF024M17+ ATAACCTTGAGAGCGAAAAATTGGGCTGTCCACTTATGTTGAACAAGCCGCACAACACCG
JMSF050I18+ ATAACCTTGAGAGCGAAAAATTGCGCTGTCCACTTATGTTGAACAAGCCGCACAACACCG
JMSF047J19+ ACCTTGAGAGCGAAAAATTGCGCTGTCCACTTATGTTGAACAAGCCGCACAACACCG
JMSF049J23+ ATAACCTTGAGAGCGAAAAATTGCGCTGTCCACTTATGTTGAACAAGCCGCACAACACCG
                      ____________________________________________________________
consensus ATAACCTTGAGAGCGAAAAATTGCGCTGTCCACTTATGTTGAACAAGCCGCACAACACCG
 
. : . : . : . : . : . :
JMSF024M17+ CCATTTCCCTTTCCAATAACTTTAACATTATTCAAAGTCTGCTAGGCTTAACTGATTATC
JMSF050I18+ CCATTTCCCTTTCCAATAACTTTAACA-TATTCAAAGTCTGCTAAGCTTAACTGGTTATC
JMSF009L06+ TCCAATAACTTTAACA-TATTCAAAGTCTGCTAAGCTTAACTGGTTATC
JMSF047J19+ CCATTTCCCTTTCCAATAACTTTAACA-TATTCAAAGTCTGCTAAGCTTAACTGGTTATC
JMSF049J23+ CCATTTCCCTTTCCAATAACTTTAACA-TATTCAAAGTCTGCTAAGCTTAACTGGTTATC
                      ____________________________________________________________
consensus CCATTTCCCTTTCCAATAACTTTAACA-TATTCAAAGTCTGCTAAGCTTAACTGGTTATC
 
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JMSF024M17+ GGTTGGCTTTATAACTGTAGAAGTTTCAACATGTTTATCTGAAATAATCCGAATTCCATC
JMSF050I18+ AGTTGGCTTTATAACCGTAGAAGTTTCAACATGATTATCTGAAATAATCCGAATTCCATC
JMSF009L06+ AGTTGGCTTTATAACCGTAGAAGTTTCAACATGATTATCTGAAATAATCCGAATTCCATC
JMSF047J19+ AGTTGGCTTTATAACCGTAGAAGTTTCAACATGATTATCTGAAATAATCCGAATTCCATC
JMSF049J23+ AGTTGGCTTTATAACCGTAGAAGTTTCAACATGATTATCTGAAATAATCCGAATTCCATC
                      ____________________________________________________________
consensus AGTTGGCTTTATAACCGTAGAAGTTTCAACATGATTATCTGAAATAATCCGAATTCCATC
 
. : . : . : . : . : . :
JMSF024M17+ TTTGTTCACCAGCAGATCTCCATCCTTGAATGTTCCTGATTGTGTCAGGAATTTGGATAG
JMSF050I18+ TTTGTTCACCAGCAGATCTCCATCCTTAAATGTTCCTGATTGTGTCAGGAATTTGGAGAG
JMSF009L06+ TTTGTTCACCAGCAGATCTCCATCCTTAAATGTTCCTGATTGTGTCAGGAATTTGGAGAG
JMSF047J19+ TTTGTTCACCAGCAGATCTCCATCCTTAAATGTTCCTGATTGTGTCAGGAATTTGGAGAG
JMSF049J23+ TTTGTTCACCAGCAGATCTCCATCCTTAAATGTTCCTGATTGTGTCAGGAATTTGGAGAG
                      ____________________________________________________________
consensus TTTGTTCACCAGCAGATCTCCATCCTTAAATGTTCCTGATTGTGTCAGGAATTTGGAGAG
 
. : . : . : . : . : . :
JMSF024M17+ AGCAACTTCATCAGGAGGAGGGAGAGAGAGTTTGAGCTTAGGGGCCAAAGCTCCTTTATT
JMSF050I18+ AGCAACTTCATCAGGAGGAGGGAGAGAGAGTTTGAGCTTAGGGGCCAAAGCTCCTTTATT
JMSF009L06+ AGCAACTTCATCAGGAGGAGGGAGAGAGAGTTTGAGCTTAGGGGCCAAAGCTCCTTTATT
JMSF047J19+ AGCAACTTCATCAGGAGGAGGGAGAGAGAGTTTGAGCTTAGGGGCCAAAGCTCCTTTATT
JMSF049J23+ AGCAACTTCATCAGGAGGAGGGAGAGAGAGTTTGAGCTTAGGGGCCAAAGCTCCTTTATT
                      ____________________________________________________________
consensus AGCAACTTCATCAGGAGGAGGGAGAGAGAGTTTGAGCTTAGGGGCCAAAGCTCCTTTATT
 
. : . : . : . : . : . :
JMSF024M17+ CATTGCAATTCTCTCTTGCAAAGC
JMSF050I18+ CATTGCAATTCTCTCTAGCAAAGCAAAGCTT
JMSF009L06+ CATTGCAATTCTCTCTAGCAAAGCAAAGCTTAGAAGTATTTTCCAATTCTACTTCTTTAT
JMSF047J19+ CATTGCAATTCTCTCTAGCAAAGCAAAGCTTAGAAGTATTTTCCAATTCTACTTCTTTAT
JMSF049J23+ CATTGCAATTCTCTCTAGCAAAGCAAAGCTTAGAAGTATTTTCCAATTCTACTTCTTTAT
                      ____________________________________________________________
consensus CATTGCAATTCTCTCTAGCAAAGCAAAGCTTAGAAGTATTTTCCAATTCTACTTCTTTAT
 
. : . : . : . : . : . :
JMSF009L06+ CTGGGCTTTTTGATGAAAAATTGCACAAGTGATGTGAGAGCTCCTCTCTCCCTCTGCGTC
JMSF047J19+ CTGGGCTTTTTGATGAAAAATTGCACAAGTGATGTGAGAGCTCCTCTCTCCCTCTGCGTC
JMSF049J23+ CTGGGCTTTTTGATGAAAAATTGCACAAGTGATGTGAGAGCTCCTCTCTCCCTCTGCGTC
                      ____________________________________________________________
consensus CTGGGCTTTTTGATGAAAAATTGCACAAGTGATGTGAGAGCTCCTCTCTCCCTCTGCGTC
 
. : . : . : . : . : . :
JMSF009L06+ TCTTTGTGTGGGTCTTCCAC
JMSF047J19+ TCTTTGTGTGGGTCTTCCACGGAACAGAAAGAGTGGCAC
JMSF049J23+ TCTTTGTGTGGGTCTTCCACGGAACAGAAAGAGTGGCACACTCTGTATGAGTTGAATGGT
                      ____________________________________________________________
consensus TCTTTGTGTGGGTCTTCCACGGAACAGAAAGAGTGGCACACTCTGTATGAGTTGAATGGT
 
. : . : . : . : . : . :
JMSF049J23+ GAGAACCTAAGAGAGAGAAAACAGGACGAAGATGCTTTCTTTGACTTTTCTCCATTCTCC
                      ____________________________________________________________
consensus GAGAACCTAAGAGAGAGAAAACAGGACGAAGATGCTTTCTTTGACTTTTCTCCATTCTCC