Contig 010915:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009A23Sequence330010915 (6)ref|XP_006357316.1|4e-15PREDICTED: probable inactive receptor kinase At5g58300-like [Solanum tuberosum]745005845 (6)gb|EYU36892.1|1e-80hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]
JMSF010D23Sequence393010915 (6)ref|XP_009607538.1|1e-29PREDICTED: probable inactive receptor kinase At5g58300 [Nicotiana tomentosiform753005845 (6)gb|EYU36892.1|2e-94hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]
JMSF028P12Sequence666010915 (6)ref|XP_009760496.1|6e-67PREDICTED: probable inactive receptor kinase At5g58300 isoform X2 [Nicotiana sy735005845 (6)gb|EYU36892.1|1e-89hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]
JMSF035I22Sequence689010915 (6)ref|XP_006358156.1|2e-70PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Solanum586005845 (6)emb|CDP13882.1|9e-61unnamed protein product [Coffea canephora]
JMSF049F01Sequence572010915 (6)ref|XP_009607538.1|4e-28PREDICTED: probable inactive receptor kinase At5g58300 [Nicotiana tomentosiform751005845 (6)gb|EYU36892.1|5e-92hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]
JMSF051F13Sequence653010915 (6)ref|XP_006358156.1|1e-76PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Solanum767005845 (6)gb|EYU36892.1|4e-94hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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JMSF051F13+                             GAATCTGGGATCGAGCCATTTAGCATGTTGTGACTCAAATTT
JMSF035I22+                                                           TGACTCAAATTT
                      ____________________________________________________________
consensus                               GAATCTGGGATCGAGCCATTTAGCATGTTGTGACTCAAATTT
 
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JMSF051F13+           AAGTTCTTTAGCCTCGAAGACTCGAGATCAGGAACCGCACCAGATANCAAGTTATATTGC
JMSF028P12+                      CCTCGAAGACTCGAGATCAGGAACCGCACCAGATAACAAGTTATATTGC
JMSF035I22+           AAGTTCTTTAGCCTCGAAGACTCGAGATCAGGAACCGCACCAGATAACAAGTTATATTGC
                      ____________________________________________________________
consensus             AAGTTCTTTAGCCTCGAAGACTCGAGATCAGGAACCGCACCAGATAACAAGTTATATTGC
 
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JMSF051F13+           AGGTTCAGAACAGATAATCGCGACAAATTCTTGATTGCAAGTGGAATTTCGCCAGTAAAA
JMSF028P12+           AGGTTCAGAACAGATAATCGCGACAAATTCTTGATTGCAAGTGGAATTTCGCCAGTAAAA
JMSF035I22+           AGGTTCAGAACAGATAATCGCGACAAATTCTTGATTGCAAGTGGAATTTCGCCAGTAAAA
                      ____________________________________________________________
consensus             AGGTTCAGAACAGATAATCGCGACAAATTCTTGATTGCAAGTGGAATTTCGCCAGTAAAA
 
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JMSF051F13+           GAGTTAAAGGAAAGATTTAACACACCTAGCTGGGGAGAAAGCGAGGTGGGGATATTCCCA
JMSF028P12+           GAGTTAAAGGAAAGATTTAACACACCTAGCTGGGGAGAAAGCGAGGTGGGGATATTCCCA
JMSF035I22+           GAGTTAAAGGAAAGATTTAACACACCTAGCTGGGGAGAAAGCGAGGTGGGGATATTCCCA
                      ____________________________________________________________
consensus             GAGTTAAAGGAAAGATTTAACACACCTAGCTGGGGAGAAAGCGAGGTGGGGATATTCCCA
 
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JMSF051F13+           GTGAAGTTATTGTGCTGAAGGTAGACCGATTGGAGAGACGGGATGGAGAGGATATCAGAA
JMSF028P12+           GTGAAGTTATTGTGCTGAAGGTAGACCGATTGGAGAGACGGGATGGAGAGGATATCAGAA
JMSF035I22+           GTGAAGTTATTGTGCTGAAGGTAGACCGATTGGAGAGACGGGATGGAGAGGATATCAGAA
JMSF049F01+                                       ATTGGAGAGACGGGATGGAGAGGATATCAGAA
                      ____________________________________________________________
consensus             GTGAAGTTATTGTGCTGAAGGTAGACCGATTGGAGAGACGGGATGGAGAGGATATCAGAA
 
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JMSF051F13+           -GGAAGATTCCCATTCAAACGGTTGCCCCGAAGGCTTAGAACCCGAAGACCATCCAGCTT
JMSF028P12+           -GGAAGATTCCCATTCAAACGGTTGCCCCGAAGGCTTAGAACCCGAAGACCATCCAGCTT
JMSF035I22+           -GGAAGATTCCCATTCAAACGGTTGCCCCGAAGGCTTAGAACCCGAAGACCATCCAGCTT
JMSF010D23+                                                        AAGACCATCCAGCTT
JMSF049F01+           GGGAAGATTCCCATTCAAACGGTTGCCCCGAAGGCTTAGAACCCGAAGACCATCCAGCTT
                      ____________________________________________________________
consensus             -GGAAGATTCCCATTCAAACGGTTGCCCCGAAGGCTTAGAACCCGAAGACCATCCAGCTT
 
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JMSF051F13+           TCCAATAGTGTTGGGCGGGATAGAACCATAAAGACCAACACCAGGGAGATGGAGAGCTAC
JMSF028P12+           TCCAATAGTGTTGGGCGGGATAGAACCATAAAGACCAACACCAGGGAGATGGAGAGCTAC
JMSF035I22+           TCCAATAGTGTTGGGCGGGATAGAACCATAAAGACCAACACCAGGAAGATGGAGAGCTAC
JMSF010D23+           TCCAATAGTGTTGGGCGGGATAGAACCATAAAGACCAACACCAGGAAGATGGAGAGCTAC
JMSF049F01+           TCCAATAGTGTTGGGCGGGATAGAACCATAAAGACCAACACCAGGGAGATGGAGAGCTAC
                      ____________________________________________________________
consensus             TCCAATAGTGTTGGGCGGGATAGAACCATAAAGACCAACACCAGGGAGATGGAGAGCTAC
 
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JMSF051F13+           AACTCTGGTCCCGTCTTTACTGCATTTGATGCCAGTCCAAGACCCGCAGATTGGGAGAGT
JMSF028P12+           AACTCTGGTCCCGTCTTTACTGCATTTGATGCCAGTCCAAGACCCGCAGATTGGGAGAGT
JMSF035I22+           AACTCTGGTCCCGTCTTTACTGCATTTGATGCCAGTCCAAGACCCGCAGATTGGGAGAGT
JMSF009A23+                   TCCCGTCTTTACTGCATTTGATGCCAGTCCAAGACCCGCAGATTGGGAGAGT
JMSF010D23+           AACTCTGGTCCCGTCTTTACTGCATTTGATGCCAGTCCAAGACCCGCAGATTGGGAGAGT
JMSF049F01+           AACTCTGGTCCCGTCTTTACTGCATTTGATGCCAGTCCAAGACCCGCAGATTGGGAGAGT
                      ____________________________________________________________
consensus             AACTCTGGTCCCGTCTTTACTGCATTTGATGCCAGTCCAAGACCCGCAGATTGGGAGAGT
 
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JMSF051F13+           AGAATTCCAGTTGAGCTTTCGTCGATGAGGAACAGATGCAGAAAACTCGAGCAAGGCCTT
JMSF028P12+           AGAATTCCAGTTGAGCTTTCGTCGATGAGGAACAGATGCAGAAAACTCGAGCAAGGCCTT
JMSF035I22+           AGAATTCCAGTTGAGCTTTCGTCGATGAGGAACAGATGCAGAAAACTCGAGCAAGGCCTT
JMSF009A23+           AGAATTCCAGTTGAGCTTTCGTCGATGAGGAACAGATGCAGAAAACTCGAGCAAGGCCTT
JMSF010D23+           AGAATTCCAGTTGAGCTTTCGTCGATGAGGAACAGATGCAGAAAACTCGAGCAAGGCCTT
JMSF049F01+           AGAATTCCAGTTGAGCTTTCGTCGATGAGGAACAGATGCAGAAAACTCGAGCAAGGCCTT
                      ____________________________________________________________
consensus             AGAATTCCAGTTGAGCTTTCGTCGATGAGGAACAGATGCAGAAAACTCGAGCAAGGCCTT
 
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JMSF051F13+           TCCATCGGAGTCAAGATCAGCAACAATCCCCGGAAGAAAGAAAACAGAAGCAACAGCTGC
JMSF028P12+           TCCATCGGAGTCAAGATCAGCAACAATCCCCGGAAGAAAGAAAACAGAAGCAACAGCTGC
JMSF035I22+           TCCATCGGAGTCAAGATCAGCAACAATCCCCGGAAGAAAGAAAACAGAAGCAACAGCTGC
JMSF009A23+           TCCATCGGAGTCAAGATCAGCAACAATCCCCGGAAGAAAGAAAACAGAAGCAACAGCTGC
JMSF010D23+           TCCATCGGAGTCAAGATCAGCAACAATCCCCGGAAGAAAGAAAACAGAAGCAACAGCTGC
JMSF049F01+           TCCATCGGAGTCAAGATCAGCAACAATCCCCGGAAGAAAGAAAACAGAAGCAACAGCTGC
                      ____________________________________________________________
consensus             TCCATCGGAGTCAAGATCAGCAACAATCCCCGGAAGAAAGAAAACAGAAGCAACAGCTGC
 
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JMSF051F13+           TAGTAAGAGATGAATTCTCATCGCGATTTTCTTAATGGCTGCTAGTAAGCGAGGCTGCCA
JMSF028P12+           TAGTAAGAGATGAATTCTCATCGCGATTTTCTTAATGGCTGCTAGTAAGCGAGGCTGCCA
JMSF035I22+           TAGTAAGAGATGAATTCTCATCGCGATTTTCTTAATGGCTGCTAGTAAGCGAGGCTGCCA
JMSF009A23+           TAGTAAGAGATGAATTCTCATCGCGATTTTCTTAATGGCTGCTAGTAAGCGAGGCTGCCA
JMSF010D23+           TAGTAAGAGATGAATTCTCATCGCGATTTTCTTAATGGCTGCTAGTAAGCGAGGCTGCCA
JMSF049F01+           TAGTAAGAGATGAATTCTCATCGCGATTTTCTTAATGGCTGCTAGTAAGCGAGGCTGCCA
                      ____________________________________________________________
consensus             TAGTAAGAGATGAATTCTCATCGCGATTTTCTTAATGGCTGCTAGTAAGCGAGGCTGCCA
 
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JMSF051F13+           TATAATAATG                                                  
JMSF028P12+           TATAATAATGCTCGAGAAATGGAGTCTGAGCAGCTATATATGGCGAGAATGCGAGACCTT
JMSF035I22+           TATAATAATGCTCGAGAAATGGAGTCTGAGCAGCTATATATGGCGAGAATGCGAGACCTT
JMSF009A23+           TATAATAATGCTCGAGAAATGGAGTCTGAGCAGCTATATATGGCGAGAATGCGAGACCTT
JMSF010D23+           TATAATAATGCTCGAGAAATGGAGTCTGAGCAGCTATATATGGCGAGAATGCGAGACCTT
JMSF049F01+           TATAATAATGCTCGAGAAATGGAGTCTGAGCAGCTATATATGGCGAGAATGCGAGACCTT
                      ____________________________________________________________
consensus             TATAATAATGCTCGAGAAATGGAGTCTGAGCAGCTATATATGGCGAGAATGCGAGACCTT
 
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JMSF028P12+           ATACATCATGCATCAA                                            
JMSF035I22+           ATACATCATGCATCAA                                            
JMSF009A23+           ATACATCATGCATCAA                                            
JMSF010D23+           ATACATCATGCATCAA                                            
JMSF049F01+           ATACATCATGCATCAATGATTGGACCGCCTTTTCTCTGCATATTTAAATTTTGCAGGCAC
                      ____________________________________________________________
consensus             ATACATCATGCATCAATGATTGGACCGCCTTTTCTCTGCATATTTAAATTTTGCAGGCAC
 
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JMSF049F01+           AGTGAATCTTAGCAAAGAAGGCATGCTACACACAAAGGAGCTCATCAAAGCTAAAGAGTC
                      ____________________________________________________________
consensus             AGTGAATCTTAGCAAAGAAGGCATGCTACACACAAAGGAGCTCATCAAAGCTAAAGAGTC