Contig 010896:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022K21Sequence671010896 (7)ref|XP_004232623.1|9e-75PREDICTED: uncharacterized protein LOC101252349 isoform X2 [Solanum lycopersicu731007254 (7)ref|XP_004232623.1|8e-40PREDICTED: uncharacterized protein LOC101252349 isoform X2 [Solanum lycopersicu
JMSF028L23Sequence679010896 (7)ref|XP_010316519.1|4e-84PREDICTED: uncharacterized protein LOC101252349 isoform X1 [Solanum lycopersicu724007254 (7)ref|XP_009617275.1|5e-58PREDICTED: uncharacterized protein LOC104109628 isoform X2 [Nicotiana tomentosi
JMSF038G15Sequence682010896 (7)ref|XP_004232623.1|6e-84PREDICTED: uncharacterized protein LOC101252349 isoform X2 [Solanum lycopersicu889007254 (7)ref|XP_002275523.2|1e-74PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth
JMSF042P04Sequence698010896 (7)ref|XP_004232623.1|4e-88PREDICTED: uncharacterized protein LOC101252349 isoform X2 [Solanum lycopersicu701007254 (7)ref|XP_009617275.1|1e-52PREDICTED: uncharacterized protein LOC104109628 isoform X2 [Nicotiana tomentosi
JMSF047B23Sequence641010896 (7)ref|XP_010316519.1|1e-50PREDICTED: uncharacterized protein LOC101252349 isoform X1 [Solanum lycopersicu769007254 (7)ref|XP_009617275.1|6e-48PREDICTED: uncharacterized protein LOC104109628 isoform X2 [Nicotiana tomentosi
JMSF049K03Sequence624010896 (7)ref|XP_004232623.1|2e-55PREDICTED: uncharacterized protein LOC101252349 isoform X2 [Solanum lycopersicu783007254 (7)ref|XP_002275523.2|3e-83PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth
JMSF052B12Sequence718010896 (7)ref|XP_010316519.1|2e-81PREDICTED: uncharacterized protein LOC101252349 isoform X1 [Solanum lycopersicu843007254 (7)ref|XP_002275523.2|1e-71PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042P04+ TCCAAAAGGTCCTC
                      ____________________________________________________________
consensus TCCAAAAGGTCCTC
 
. : . : . : . : . : . :
JMSF028L23+ AGAAGCAAGCTAGTGCATTTTTCAGCACTTGGCAAGAAGTCACCATAGAG
JMSF042P04+ CTCTTTAGCTAGAAGCAAGCTAGTGCATTCTTCAGCACTTGGCAAGAAGTCACCATAGAG
JMSF038G15+ AGAAGCAAGCTAGTGCATTCTTCAGCACTTGGCAAGAAGTCACCATAGAG
JMSF022K21+ AGTCACCATAGAG
JMSF052B12+ AGAAGCAAGCTAGTGCATTCTTCAGCACTTGGCAAGAAGTCACCATAGAG
                      ____________________________________________________________
consensus CTCTTTAGCTAGAAGCAAGCTAGTGCATTCTTCAGCACTTGGCAAGAAGTCACCATAGAG
 
. : . : . : . : . : . :
JMSF028L23+ TTGCCAAAAGTTGTCCTTGCAATCAAAGGAATACAAAAGAAGGCATGCCAACCTTAGGTC
JMSF042P04+ TTGCCAAAAGTTGTCCTTGCAATCAAAGGAATACAAAAGAAGGCATGCCAACCTTAGGTC
JMSF038G15+ TTGCCAAAAGTTGTCCTTGCAATCAAAGGAATACAAAAGAAGGCATGCCAACCTTAGGTC
JMSF022K21+ TTGCCAAAAGTTGTCCTTGCAATCAAAGGAATACAAAAGAAGGCATGCCAACCTTAGGTC
JMSF052B12+ NTGCCAAAAGTTGTCCTTGCAATCAAAGGAATACAAAAGAAGGCATGCCAACCTTAGGTC
                      ____________________________________________________________
consensus TTGCCAAAAGTTGTCCTTGCAATCAAAGGAATACAAAAGAAGGCATGCCAACCTTAGGTC
 
. : . : . : . : . : . :
JMSF028L23+ CCAATCTGTCTCTGGATTGGTGGAATTAATAATGTCAAATATAGGATGACCCACGGGTAT
JMSF042P04+ CCAATCTGTCTCTGGATTGGTGGAATTAATAATGTCAAATATAGGATGACCCACGGGTAT
JMSF038G15+ CCAATCTGTCTCTGGATTGGTGGAATTAATAATGTCAAATATAGGATGACCCACGGGTAT
JMSF022K21+ CCAATCTGTCTCTGGATTGGTGGAATTAATAATGTCAAATATAGGATGACCCACGGGTAT
JMSF052B12+ CCAATCTGTCTCTGGATTGGTGGAATTAATAATGTCAAATATAGGATGACCCACGGGTAT
JMSF049K03+ CCAATCTGTCTCTGGATTGGTGGAATTAATAATGTCAAATATAGGATGACCCACGGGTAT
JMSF047B23+ GTGGAATTAATAATGTCAAATATAGGATGACCCACGGGTAT
                      ____________________________________________________________
consensus CCAATCTGTCTCTGGATTGGTGGAATTAATAATGTCAAATATAGGATGACCCACGGGTAT
 
. : . : . : . : . : . :
JMSF028L23+ AATGTCAGGGAAAAACATCCAAGGAAGCTTTTGACTTATTGTTAACATCAACTCTAATGG
JMSF042P04+ AATGTCAGGGAAAAACATCCAAGGAAGCTTTTGACTTATTGTTAACATCAACTCTAATGG
JMSF038G15+ AATGTCAGGGAAAAACATCCAAGGAAGCTTTTGACTTATTGTTAACATCAACTCTAATGG
JMSF022K21+ AATGTCAGGGAAAAACATCCAAGGAAGCTTTTGACTTATTGTTAACATCAACTCTAATGG
JMSF052B12+ AATGTCAGGGAAAAACATCCAAGGAAGCTTTTGACTTATTGTTAACATCAACTCTAATGG
JMSF049K03+ AATGTCAGGGAAAAACATCCAAGGAAGCTTTTGACTTATTGTTAACATCAACTCTAATGG
JMSF047B23+ AATGTCAGGGAAAAACATCCAAGGAAGCTTTTGACTTATTGTTAACATCAACTCTAATGG
                      ____________________________________________________________
consensus AATGTCAGGGAAAAACATCCAAGGAAGCTTTTGACTTATTGTTAACATCAACTCTAATGG
 
. : . : . : . : . : . :
JMSF028L23+ GATTTCCATGATGATCCTGGAACGACGAAGAGGCTCAACATCTTTGGAAGCATATACTCC
JMSF042P04+ GATTTCCATGATGATCCTGGAACGACGAAGAGGCTCAACATCTTTGGAAGCATATACTCC
JMSF038G15+ GATTTCCATGATGATCCTGGAACGACGAAGAGGCTCAACATCTTTGGAAGCATATACTCC
JMSF022K21+ GATTTCCATGATGATCCTGGAACGACGAAGAGGCTCAACATCTTTGGAAGCATATACTCC
JMSF052B12+ GATTTCCATGATGATCCTGGAACGACGAAGAGGCTCAACATCTTTGGAAGCATATACTCC
JMSF049K03+ GATTTCCATGATGATCCTGGAACGACGAAGAGGCTCAACATCTTTGGAAGCATATACTCC
JMSF047B23+ GATTTCCATGATGATCCTGGAACGACGAAGAGGCTCAACATCTTTGGAAGCATATACTCC
                      ____________________________________________________________
consensus GATTTCCATGATGATCCTGGAACGACGAAGAGGCTCAACATCTTTGGAAGCATATACTCC
 
. : . : . : . : . : . :
JMSF028L23+ ATACCCATCGGGTCCTTCCCTGAATTCCACTCCATATGCTCGGAAACTTCTCACAAACCC
JMSF042P04+ ATACCCATCGGGTCCTTCCCTGAATTCCACTCCATATGCTCGGAAACTTCTCACAAACCC
JMSF038G15+ ATACCCATCGGGTCCTTCCCTGAATTCCACTCCATATGCTCGGAAACTTCTCACAAACCC
JMSF022K21+ ATACCCATCGGGTCCTTCCCTGAATTCCACTCCATATGCTCGGAAACTTCTCACAAACCC
JMSF052B12+ ATACCCATCGGGTCCTTCCCTGAATTCCACTCCATATGCTCGGAAACTTCTCACAAACCC
JMSF049K03+ ATACCCATCGGGTCCTTCCCTGAATTCCACTCCATATGCTCGGAAACTTCTCACAAACCC
JMSF047B23+ ATACCCATCGGGTCCTTCCCTGAATTCCACTCCATATGCTCGGAAACTTCTCACAAACCC
                      ____________________________________________________________
consensus ATACCCATCGGGTCCTTCCCTGAATTCCACTCCATATGCTCGGAAACTTCTCACAAACCC
 
. : . : . : . : . : . :
JMSF028L23+ TATCTTGTAGAAATCAGGGTCTGCCAGCTCCAACTGAGAAGCAGGAGTTTCTTCAGGCTG
JMSF042P04+ TATCTTGTAGAAATCAGGGTCTGCCAGCTCCAACTGAGAAGCAGGAGTTTCTTCAGGCTG
JMSF038G15+ TATCTTGTAGAAATCAGGGTCTGCCAGCTCCAACTGAGAAGCAGGAGTTTCTTCAGGCTG
JMSF022K21+ TATCTTGTAGAAATCAGGGTCTGCCAGCTCCAACTGAGAAGCAGGAGTTTCTTCAGGCTG
JMSF052B12+ TATCTTGTAGAAATCAGGGTCTGCCAGCTCCAACTGAGAAGCAGGAGTTTCTTCAGGCTG
JMSF049K03+ TATCTTGTAGAAATCAGGGTCTGCCAGCTCCAACTGAGAAGCAGGAGTTTCTTCAGGCTG
JMSF047B23+ TATCTTGTAGAAATCAGGGTCTGCCAGCTCCAACTGAGAAGCAGGAGTTTCTTCAGGCTG
                      ____________________________________________________________
consensus TATCTTGTAGAAATCAGGGTCTGCCAGCTCCAACTGAGAAGCAGGAGTTTCTTCAGGCTG
 
. : . : . : . : . : . :
JMSF028L23+ AGAAGGCGGGTGAAAGAGAGGGAACGAAGAAGGAGATGAAGAAGAATTAGGGATGTCAAG
JMSF042P04+ AGAAGGCGGGTGAAAGAGAGGGAACGAAGAAGGAGATGAAGAAGAATTAGGGATGTCAAG
JMSF038G15+ AGAAGGCGGGTGAAAGAGAGGGAACGAAGAAGGAGATGAAGAAGAATTAGGGATGTCAAG
JMSF022K21+ AGAAGGCGGGTGAAAGAGAGGGAACGAAGAAGGAGATGAAGAAGAATTAGGGATGTCAAG
JMSF052B12+ AGAAGGCGGGTGAAAGAGAGGGAACGAAGAAGGAGATGAAGAAGAATTAGGGATGTCAAG
JMSF049K03+ AGAAGGCGGGTGAAAGAGAGGGAACGAAGAAGGAGATGAAGAAGAATTAGGGATGTCAAG
JMSF047B23+ AGAAGGCGGGTGAAAGAGAGGGAACGAAGAAGGAGATGAAGAAGAATTAGGGATGTCAAG
                      ____________________________________________________________
consensus AGAAGGCGGGTGAAAGAGAGGGAACGAAGAAGGAGATGAAGAAGAATTAGGGATGTCAAG
 
. : . : . : . : . : . :
JMSF028L23+ AGTAGCTGTACTAGTAGAAGCAGCAGCGCCATTAGCACTAGCAGCACCAATTTCAGCTCT
JMSF042P04+ AGTAGCTGTACTAGTAGAAGCAGCAGCGCCATTAGCACTAGCAGCACCAATTTCAGCTCT
JMSF038G15+ AGTAGCTGTACTAGTAGAAGCAGCAGCGCCATTAGCACTAGCAGCACCAATTTCAGCTCT
JMSF022K21+ AGTAGCTGTACTAGTAGAAGCAGCAGCGCCATTAGCACTAGCAGCACCAATTTCAGCTCT
JMSF052B12+ AGTAGCTGTACTAGTAGAAGCAGCAGCGCCATTAGCACTAGCAGCACCAATTTCAGCTCT
JMSF049K03+ AGTAGCTGTACTAGTAGAAGCAGCAGCGCCATTAGCACTAGCAGCACCAATTTCAGCTCT
JMSF047B23+ AGTAGCTGTACTAGTAGAAGCAGCAGCGCCATTAGCACTAGCAGCACCAATTTCAGCTCT
                      ____________________________________________________________
consensus AGTAGCTGTACTAGTAGAAGCAGCAGCGCCATTAGCACTAGCAGCACCAATTTCAGCTCT
 
. : . : . : . : . : . :
JMSF028L23+ GATAATTGGTCTGCGTCTTGTTACAACAATGGCCTGGGCGGGGAGCCGCCACCTCTGGCA
JMSF042P04+ GATAATTGGTCTGCGTCTTGTTACAACAATGGCCTGGGCGGGGAGCCGCCACCTCTGGCA
JMSF038G15+ GATAATTGGTCTGCGTCTTGTTACAACAATGGCCTGGGCGGGGAGCCGCCACCTCTGGCA
JMSF022K21+ GATAATTGGTCTGCGTCTTGTTACAACAATGGCCTGGGCGGGGAGCCGCCACCTCTGGCA
JMSF052B12+ GATAATTGGTCTGCGTCTTGTTACAACAATGGCCTGGGCGGGGAGCCGCCACCTCTGGCA
JMSF049K03+ GATAATTGGTCTGCGTCTTGTTACAACAATGGCCTGGGCGGGGAGCCGCCACCTCTGGCA
JMSF047B23+ GATAATTGGTCTGCGTCTTGTTACAACAATGGCCTGGGCGGGGAGCCGCCACCTCTGGCA
                      ____________________________________________________________
consensus GATAATTGGTCTGCGTCTTGTTACAACAATGGCCTGGGCGGGGAGCCGCCACCTCTGGCA
 
. : . : . : . : . : . :
JMSF028L23+ GTGGTGATTTGCGGAGACCAGAAAATGGGAGGAGGGTTGATGAATCAGAGTAGAAGTCAC
JMSF042P04+ GTGGTGATTTGCGGAGACCAGAAAATGGGAGGAGGGTTGATGAATCAGAGTAGAAGTCAC
JMSF038G15+ GTGGTGATTTGCGGAGACCAGAAAATGGGAGGAGGGTTGATGAATCAGAGTAGAAGTCAC
JMSF022K21+ GTGGTGATTTGCGGAGACCAGAAAATGGGAGGAGGGTTGATGAATCAGAGTAGAAGTCAC
JMSF052B12+ GTGGTGATTTGCGGAGACCAGAAAATGGGAGGAGGGTTGATGAATCAGAGTAGAAGTCAC
JMSF049K03+ GTGGTGATTTGCGGAGACCAGAAAATGGGAGGAGGGTTGATGAATCAGAGTAGAAGTCAC
JMSF047B23+ GTGGTGATTTGCGGAGACCAGAAAATGGGAGGAGGGTTGATGAATCAGAGTAGAAGTCAC
                      ____________________________________________________________
consensus GTGGTGATTTGCGGAGACCAGAAAATGGGAGGAGGGTTGATGAATCAGAGTAGAAGTCAC
 
. : . : . : . : . : . :
JMSF028L23+ CATTACTTTTCCAGTTGAAATTC
JMSF042P04+ CATTACTTTTCCAGTTGAAATTC
JMSF038G15+ CATTACTTTTCCAGTTGAAATTCGAATCC
JMSF022K21+ CATTACTTTTCCAGTTGAAATTCGAATCCTCCGAAACGTTATCCACTAGACCACCGC
JMSF052B12+ CATTACTTTTCCAGTTGAAATTCGAATCCTCCGAAACGTTATCCACTAGACCACCGCTAC
JMSF049K03+ CATTACTTTTCCAGTTGAAATTCGAATCCTCCGAAACGTTATCCACTAGACCACCGCTAC
JMSF047B23+ CATTACTTTTCCAGTTGAAATTCGAATCCTCCGAAACGTTATCCACTAGACCACCGCTAC
                      ____________________________________________________________
consensus CATTACTTTTCCAGTTGAAATTCGAATCCTCCGAAACGTTATCCACTAGACCACCGCTAC
 
. : . : . : . : . : . :
JMSF052B12+ TATCAGC
JMSF049K03+ TATCAGCGATTCAGTGAATCGTC
JMSF047B23+ TATCAGCGATTCAGTGAATCGTCATCTCTCAGAAAATGAACCAAGGGGTTTTTTGCTGTC
                      ____________________________________________________________
consensus TATCAGCGATTCAGTGAATCGTCATCTCTCAGAAAATGAACCAAGGGGTTTTTTGCTGTC