Contig 010893:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046I15+                                                CACAAGCTTCCATTATTGCCAGT
                      ____________________________________________________________
consensus                                                  CACAAGCTTCCATTATTGCCAGT
 
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JMSF036J12+                                  ATATGGCCAGTGTTTCCAGGACCATGGTGGTAGGCAT
rJMCP018H06+                        ATCAAATAAATATGGCCAGTGTTTCCAGGACCATGGTGGTAGGCAT
JMSF046I15+           GGTTGCCATGGTGGATCAAATAAATATGGCCAGTGTTTCCAGGACCATGGTGGTAGGCAT
                      ____________________________________________________________
consensus             GGTTGCCATGGTGGATCAAATAAATATGGCCAGTGTTTCCAGGACCATGGTGGTAGGCAT
 
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JMSF036J12+           ACTGAGGAAGCTTTGCAGCAGCTTTCTTATGGCAAGGGGGAAACACCATAGGGGGCATTG
rJMCP018H06+          ACTGAGGAAGCTTTGCAGCAGCTTTCTTATGGCAAGGGGGAAACACCATAGGGGGCATTG
JMSF046I15+           ACTGAGGAAGCTTTGCAGCAGCTTTCTTATGGCAAGGGGGAAACACCATAGGGGGCATTG
                      ____________________________________________________________
consensus             ACTGAGGAAGCTTTGCAGCAGCTTTCTTATGGCAAGGGGGAAACACCATAGGGGGCATTG
 
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JMSF036J12+           ACATCTGACAGGCACACCTCTTAGTACTAGATGATCCAAAGTACCTCGAAGCAGAGTAGG
rJMCP018H06+          ACATCTGACAGGCACACCTCTTAGTACTAGATGATCCAAAGTACCTCGAAGCAGAGTAGG
JMSF046I15+           ACATCTGACAGGCACACCTCTTAGTACTAGATGATCCAAAGTACCTCGAAGCAGAGTAGG
                      ____________________________________________________________
consensus             ACATCTGACAGGCACACCTCTTAGTACTAGATGATCCAAAGTACCTCGAAGCAGAGTAGG
 
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JMSF036J12+           ACTTTGGTGATAAAGCATCATTGGTGGTAGACAAAGAACCAAATGAAGGCGAAGGAGAGG
rJMCP018H06+          ACTTTGGTGATAAAGCATCATTGGTGGTAGACAAAGAACCAAATGAAGGCGAAGGAGAGG
JMSF046I15+           ACTTTGGTGATAAAGCATCATTGGTGGTAGACAAAGAACCAAATGAAGGCGAAGGAGAGG
                      ____________________________________________________________
consensus             ACTTTGGTGATAAAGCATCATTGGTGGTAGACAAAGAACCAAATGAAGGCGAAGGAGAGG
 
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JMSF036J12+           CTCTTTTGTTGGATTTGGGTGGTGAAAGAAAGGCCCTTATCTTGAAAGAGCATGGTGGAG
rJMCP018H06+          CTCTTTTGTTGGATTTGGGTGGTGAAAGAAAGGCCCTTATCTTGAAAGAGCATGGTGGAG
JMSF046I15+           CTCTTTTGTTGGATTTGGGTGGTGAAAGAAAGGCCCTTATCTTGAAAGAGCATGGTGGAG
                      ____________________________________________________________
consensus             CTCTTTTGTTGGATTTGGGTGGTGAAAGAAAGGCCCTTATCTTGAAAGAGCATGGTGGAG
 
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JMSF036J12+           ACTCTAATCGATCATATTCCTCAATAAGATTGATTAGATCCTCATCACAGGTGATTGACA
rJMCP018H06+          ACTCTAATCGATCATATTCCTCAATAAGATTGATTAGATCCTCATCACAGGTGATTGACA
JMSF046I15+           ACTCTAATCGATCATATTCCTCAATAAGATTGATTAGATCCTCATCACAGGTGATTGACA
                      ____________________________________________________________
consensus             ACTCTAATCGATCATATTCCTCAATAAGATTGATTAGATCCTCATCACAGGTGATTGACA
 
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JMSF036J12+           CCAGTGCATCTAAATCTTCAGTTGGCAGTTGACACCTCAGACTAACCCCAGCTCCAAACA
rJMCP018H06+          CCAGTGCATCTAAATCTTCAGTTGGCAGTTGACACCTCAGACTAACCCCAGCTCCAAACA
JMSF046I15+           CCAGTGCATCTAAATCTTCAGTTGGCAGTTGACACCTCAGACTAACCCCAGCTCCAAACA
                      ____________________________________________________________
consensus             CCAGTGCATCTAAATCTTCAGTTGGCAGTTGACACCTCAGACTAACCCCAGCTCCAAACA
 
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JMSF036J12+           TCTTTCCGAGCTTCGCCAACAGCTCGGCAAAAGAAATGGAGCGCTCGACGGAAAGTACAC
rJMCP018H06+          TCTTTCCGAGCTTCGCCAACAGCTC                                   
JMSF046I15+           TCTTTCCGAGCTTCGCCAACAGCTCGGCAAAAGAAATGGAGCGCTCGACGGAAAGTACAC
                      ____________________________________________________________
consensus             TCTTTCCGAGCTTCGCCAACAGCTCGGCAAAAGAAATGGAGCGCTCGACGGAAAGTACAC
 
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JMSF036J12+           GGGTCTCGCCGCCATAGTAACGGAGCTTGCCGTCAGGATGGCGAGGGAGAATCTTTCCGC
JMSF046I15+           GGGTCTCGCCGCCATAGTAACGGAGCTTGCCGTCAGGATGGCGAGGGAGAATCTTTCCGC
                      ____________________________________________________________
consensus             GGGTCTCGCCGCCATAGTAACGGAGCTTGCCGTCAGGATGGCGAGGGAGAATCTTTCCGC
 
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JMSF036J12+           CATAGCTACAGAGGAATTTGATGTTGGTGGGAGAAGGACCGACCATCGTTTACAGATTTT
JMSF046I15+           CATAGCTACAGAGGAATTTGATGTTGGTGGGAGAAGGACCGACCATCGTTTACAGATTTT
                      ____________________________________________________________
consensus             CATAGCTACAGAGGAATTTGATGTTGGTGGGAGAAGGACCGACCATCGTTTACAGATTTT
 
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JMSF036J12+           TTTGTAGAAACTGATCCGATTTCTAGAAGACACAAAAGAGAACTCAGAAAGAAGAATTTG
JMSF046I15+           TTTGTAGAAACTGATCCGATTTCTAGAAGACACAAAAGAGAACTCAGAAAGAAGAATTTG
                      ____________________________________________________________
consensus             TTTGTAGAAACTGATCCGATTTCTAGAAGACACAAAAGAGAACTCAGAAAGAAGAATTTG
 
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JMSF036J12+           AAGAAGAAAAAGGCTCTGAAGTCTGAATATGCTTTTTCTTCAGTGGC             
JMSF046I15+           AAGAAGAAAAAGGCTCTGAAGTCTGAATATGCTTTTTCTTCAGTGGCTTCTTCAAGCGTC
                      ____________________________________________________________
consensus             AAGAAGAAAAAGGCTCTGAAGTCTGAATATGCTTTTTCTTCAGTGGCTTCTTCAAGCGTC