Contig 010892:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004D17Sequence583010892 (2)emb|CDP05623.1|3e-101unnamed protein product [Coffea canephora]721011418 (2)ref|XP_009794088.1|6e-66PREDICTED: cationic amino acid transporter 1-like [Nicotiana sylvestris]
JMSF046G23Sequence670010892 (2)ref|XP_009612550.1|1e-105PREDICTED: cationic amino acid transporter 1-like isoform X1 [Nicotiana tomento702011418 (2)ref|XP_009794088.1|6e-52PREDICTED: cationic amino acid transporter 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF004D17+                                                         CGATGATGAACACA
                      ____________________________________________________________
consensus                                                           CGATGATGAACACA
 
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JMFF004D17+           ATCACAACCATGTGAACGATGGAGGCGATGTAGTTGAGACGTGAAGAGCCCTTTGTGCTG
                      ____________________________________________________________
consensus             ATCACAACCATGTGAACGATGGAGGCGATGTAGTTGAGACGTGAAGAGCCCTTTGTGCTG
 
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JMFF004D17+           AGGATTGCGATGATGCAAATGGCGAAACAGACTCCCACGGCGATTGGGTNTAAGAGATTA
JMSF046G23+                                                             TAAGAGATTA
                      ____________________________________________________________
consensus             AGGATTGCGATGATGCAAATGGCGAAACAGACTCCCACGGCGATTGGGTNTAAGAGATTA
 
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JMFF004D17+           TAGCCTTCGTGCAGGGCATTAGCCTTGATGAGAAAACTCTCGGGGTGTTTGTTGAAAAGA
JMSF046G23+           TAGCCTTCGTGCAGGGCATTAGCCTTGATGAGAAAACCCTCGGGGTGTTTGTTGAAAAGA
                      ____________________________________________________________
consensus             TAGCCTTCGTGCAGGGCATTAGCCTTGATGAGAAAACTCTCGGGGTGTTTGTTGAAAAGA
 
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JMFF004D17+           GTGGCCAAGTAGTAAGTCCATGAACGAGCAACTGCGGCTCCGCCGATCACGTACTCAAGA
JMSF046G23+           GTGGCCAAGTAGTAAGTCCATGAACGAGCAACTGCGGCTCCGCCGATCACGTACTCAAGA
                      ____________________________________________________________
consensus             GTGGCCAAGTAGTAAGTCCATGAACGAGCAACTGCGGCTCCGCCGATCACGTACTCAAGA
 
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JMFF004D17+           AGTATGTTTCCGGCAGCGATGAAGGCCACAAAGTCGCCAAGTTCAACCCTTAGATAGGCA
JMSF046G23+           AGTATGTTTCCGGCAGCGATGAAGGCCACAAAGTCGCCAAGTTCAACCCTTAGATAGGCA
                      ____________________________________________________________
consensus             AGTATGTTTCCGGCAGCGATGAAGGCCACAAAGTCGCCAAGTTCAACCCTTAGATAGGCA
 
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JMFF004D17+           AATGAACCACCTGCAACTGGTATCTCGACGGCGAACTCAGTGTAGCAGAAGACAGAAAGC
JMSF046G23+           AATGAACCACCTGCAACTGGTATCTCGACGGCGAACTCAGTGTAGCAGAAGACAGAAAGC
                      ____________________________________________________________
consensus             AATGAACCACCTGCAACTGGTATCTCGACGGCGAACTCAGTGTAGCAGAAGACAGAAAGC
 
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JMFF004D17+           ATGGCGGAGAGGCCGGAGACGGTGTAGGAGAGGACGACAGCAGGGCCGGCGTGTTGGTTG
JMSF046G23+           ATGGCGGAGAGGCCGGAGACGGTGTAGGAGAGGACGACAGCAGGGCCGGCGTGTTGGTTG
                      ____________________________________________________________
consensus             ATGGCGGAGAGGCCGGAGACGGTGTAGGAGAGGACGACAGCAGGGCCGGCGTGTTGGTTG
 
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JMFF004D17+           GCCTCCTGGCCGGTGAGGACGAAAATTCCGGCGCCGATGACGGCGCCCATGCCAAACCAA
JMSF046G23+           GCCTCCTGGCCGGTGAGGACGAAAATTCCGGCGCCGATGACGGCGCCCATGCCAAACCAA
                      ____________________________________________________________
consensus             GCCTCCTGGCCGGTGAGGACGAAAATTCCGGCGCCGATGACGGCGCCCATGCCAAACCAA
 
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JMFF004D17+           ATAAGATCCCACCAGTTAAGGTTCCTCTTCATCTCGTGTTGGCTGCGCGACTTGGCGGCG
JMSF046G23+           ATAAGATCCCACCAGTTAAGGTTCCTCTTCATCTCGTGTTGGCTGCGCGACTTGGCGGCG
                      ____________________________________________________________
consensus             ATAAGATCCCACCAGTTAAGGTTCCTCTTCATCTCGTGTTGGCTGCGCGACTTGGCGGCG
 
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JMFF004D17+           AGCTCCACCTGGTCCAAGGAGCGGCTGAA                               
JMSF046G23+           AGCTCCACCTGGTCCAAGGAGCGGCTGAACACCCGATCCCTCAGCCGCGCCGGAGTCTGC
                      ____________________________________________________________
consensus             AGCTCCACCTGGTCCAAGGAGCGGCTGAACACCCGATCCCTCAGCCGCGCCGGAGTCTGC
 
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JMSF046G23+           CTCAGCGCATTGACGTAGTTGCCCCAGCTCCTGAACGATTCCTCAGGGAGAAAATCGTCC
                      ____________________________________________________________
consensus             CTCAGCGCATTGACGTAGTTGCCCCAGCTCCTGAACGATTCCTCAGGGAGAAAATCGTCC
 
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JMSF046G23+           TTACCGCAGGAACACCCTCTTATCCTCATCCCTGATTCTGAACCGCCATTTTTAGTTTCA
                      ____________________________________________________________
consensus             TTACCGCAGGAACACCCTCTTATCCTCATCCCTGATTCTGAACCGCCATTTTTAGTTTCA
 
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JMSF046G23+           ACCTCCATTTTAATTTCTATCGATCGGCTTGGTGAACTGCAAAAGCAAAGTTGCTATATC
                      ____________________________________________________________
consensus             ACCTCCATTTTAATTTCTATCGATCGGCTTGGTGAACTGCAAAAGCAAAGTTGCTATATC