Contig 010886:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF045M01Sequence704010886 (2)ref|XP_009760073.1|3e-59PREDICTED: transcription factor MYB1R1-like [Nicotiana sylvestris]642010886 (2)ref|XP_009590196.1|3e-48PREDICTED: myb-like protein J [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF045M01- AGATGGCTTAGG
                      ____________________________________________________________
consensus AGATGGCTTAGG
 
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rJMSF045M01- AAAATCCACATCTTTTGGAGCACCTAGTGCCAGCCCCAAGATCAAGTGCCTCTGCAGAAT
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consensus AAAATCCACATCTTTTGGAGCACCTAGTGCCAGCCCCAAGATCAAGTGCCTCTGCAGAAT
 
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rJMSF045M01- GGTGATGATTTGATGAAGTCTTGCATTTAACTTGATCACCATCATCATTAATAGTTGTCA
                      ____________________________________________________________
consensus GGTGATGATTTGATGAAGTCTTGCATTTAACTTGATCACCATCATCATTAATAGTTGTCA
 
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rJMSF045M01- TCATCATCACCCTCATCTCTTGATCATCATCTCCAAATGAATTGAGGTCTATCAACGAAT
                      ____________________________________________________________
consensus TCATCATCACCCTCATCTCTTGATCATCATCTCCAAATGAATTGAGGTCTATCAACGAAT
 
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rJMSF045M01- GCACATTTTCTTGATCATCTTCATGGTTTGCTTTGTGGTTATGGCTCCTTACCATGTCAA
JMSF045M01+ ATCTTCATGGTTTGCTTTGTGGTTATGGCTCCTTACCATGTCAA
                      ____________________________________________________________
consensus GCACATTTTCTTGATCATCTTCATGGTTTGCTTTGTGGTTATGGCTCCTTACCATGTCAA
 
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rJMSF045M01- AGAGGCTTGCACGACGCTTCTTGTGGTTGAGGCTTGCTAGTCTAAGAAAATACTTTTGAG
JMSF045M01+ AGAGGCTTGCACGACGCTTCTTGTGGTTGAGGCTTGCTAGTCTAAGAAAATACTTTTGAG
                      ____________________________________________________________
consensus AGAGGCTTGCACGACGCTTCTTGTGGTTGAGGCTTGCTAGTCTAAGAAAATACTTTTGAG
 
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rJMSF045M01- CATGGCTAGCAACTTGGGTTGGAGTCCTTGTACTTACAAACTTTCTTGAAATTCCTCTCC
JMSF045M01+ CATGGCTAGCAACTTGGGTTGGAGTCCTTGTACTTACAAACTTTCTTGAAATTCCTCTCC
                      ____________________________________________________________
consensus CATGGCTAGCAACTTGGGTTGGAGTCCTTGTACTTACAAACTTTCTTGAAATTCCTCTCC
 
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rJMSF045M01- AATCTCCCTTTCCTAGTTTTTCTAGTCCATTCATGAAGTTTCTGTGCTCCTTTTCTGTCC
JMSF045M01+ AATCTCCCTTTCCTAGTTTTTCTAGTCCATTCATGAAGTTTCTGTGCTCCTTTTCTGTCC
                      ____________________________________________________________
consensus AATCTCCCTTTCCTAGTTTTTCTAGTCCATTCATGAAGTTTCTGTGCTCCTTTTCTGTCC
 
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rJMSF045M01- ATGGAACTCCTTTCCTCTTCTCCTGAGCTTTGCCAATGAGACCATCAGAGAGATATCCAT
JMSF045M01+ ATGGAACTCCTTTCCTCTTCTCCTGAGCTTTGCCAATGAGACCATCAGAGAGATATCCAT
                      ____________________________________________________________
consensus ATGGAACTCCTTTCCTCTTCTCCTGAGCTTTGCCAATGAGACCATCAGAGAGATATCCAT
 
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rJMSF045M01- TAATGGATGTTTTTATTTCACAGTTTTCATGAACAGAAACTAGCGTGGAAGAGTGGGGAG
JMSF045M01+ TAATGGATGTTTTTATTTCACAGTTTTCATGAACAGAAACTAGCGTGGAAGAGTGGGGAG
                      ____________________________________________________________
consensus TAATGGATGTTTTTATTTCACAGTTTTCATGAACAGAAACTAGCGTGGAAGAGTGGGGAG
 
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rJMSF045M01- ATGAAGAAGGAGAAGAAGAGAGGCAATCCAAGCTCAAACTTTTCTTCATTGCAATAGAAG
JMSF045M01+ ATGAAGAAGGAGAAGAAGAGAGGCAATCCAAGCTCAAACTTTTCTTCATTGCAATAGAAG
                      ____________________________________________________________
consensus ATGAAGAAGGAGAAGAAGAGAGGCAATCCAAGCTCAAACTTTTCTTCATTGCAATAGAAG
 
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rJMSF045M01- AGTTGGTTGAAGAAGAAGAA
JMSF045M01+ AGTTGGTTGAAGAAGAAGAAGGAGAAGAGCATAGAGAAGAAGAAGAAGAGATTTCAAGCT
                      ____________________________________________________________
consensus AGTTGGTTGAAGAAGAAGAAGGAGAAGAGCATAGAGAAGAAGAAGAAGAGATTTCAAGCT
 
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JMSF045M01+ GAACTCCAAACAACCTTAATCCTCCAACAACAACATTATTATTAGTGTTACTAATAATAC
                      ____________________________________________________________
consensus GAACTCCAAACAACCTTAATCCTCCAACAACAACATTATTATTAGTGTTACTAATAATAC
 
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JMSF045M01+ AACCTTTGACAGTGGTGCACGTTCTTGAATTGTGACCTGTGATCCCACATTTTGAACACT
                      ____________________________________________________________
consensus AACCTTTGACAGTGGTGCACGTTCTTGAATTGTGACCTGTGATCCCACATTTTGAACACT
 
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JMSF045M01+ TTCTGCCCATTTTCACACAGACAAAGATCTGCAGAGAGCTTACCTTAGCTTCCTAAATTG
                      ____________________________________________________________
consensus TTCTGCCCATTTTCACACAGACAAAGATCTGCAGAGAGCTTACCTTAGCTTCCTAAATTG
 
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JMSF045M01+ CAAAACCAGAAAATGAAGGAAATGAGCTTTGAGGAATTAATGGGGTGTGGGAGAGGGACC
                      ____________________________________________________________
consensus CAAAACCAGAAAATGAAGGAAATGAGCTTTGAGGAATTAATGGGGTGTGGGAGAGGGACC