Contig 010861:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042N18Sequence764010861 (2)ref|XP_007222646.1|4e-11hypothetical protein PRUPE_ppa008554mg [Prunus persica] gb|EMJ23845.1| hypotheti468012782 (2)ref|XP_002312293.1|3e-08hypothetical protein POPTR_0008s09770g [Populus trichocarpa] gb|EEE89660.1| hypo
JMSF051C24Sequence553010861 (2)ref|XP_007222646.1|1e-20hypothetical protein PRUPE_ppa008554mg [Prunus persica] gb|EMJ23845.1| hypotheti718012782 (2)emb|CDP00461.1|2e-14unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042N18+ ACACTACTGAAAATTATGGAATTTTTGACCACCTGAAAGTGATC
                      ____________________________________________________________
consensus ACACTACTGAAAATTATGGAATTTTTGACCACCTGAAAGTGATC
 
. : . : . : . : . : . :
JMSF042N18+ TTAAATCAAGTTAATACCAAAAAGTGATCGGAAATAGCAACAAAGGTTTTTCCGAATATC
                      ____________________________________________________________
consensus TTAAATCAAGTTAATACCAAAAAGTGATCGGAAATAGCAACAAAGGTTTTTCCGAATATC
 
. : . : . : . : . : . :
JMSF042N18+ AAAAGTGGTCGGAACAAGACTTTCGACTTGATTTAAGATCACTTTTAGGTGGTCGGAAAT
                      ____________________________________________________________
consensus AAAAGTGGTCGGAACAAGACTTTCGACTTGATTTAAGATCACTTTTAGGTGGTCGGAAAT
 
. : . : . : . : . : . :
JMSF042N18+ TCCATAATTTCCATTAGTGTCACAGGAACTGGCTGGTGCTGGGAGGGGATTATTGGGCAG
                      ____________________________________________________________
consensus TCCATAATTTCCATTAGTGTCACAGGAACTGGCTGGTGCTGGGAGGGGATTATTGGGCAG
 
. : . : . : . : . : . :
JMSF042N18+ AGGCCGATAAAGGGCCAAGTCCAACATCCTGACTTTCAAAAATGTATGGGGATATAAGGA
                      ____________________________________________________________
consensus AGGCCGATAAAGGGCCAAGTCCAACATCCTGACTTTCAAAAATGTATGGGGATATAAGGA
 
. : . : . : . : . : . :
JMSF042N18+ ATAAGCAATTAAGGCTGACATGTGTGCTTTTGGCGTAGTGGTAAGCGTTCGATCCTAACA
                      ____________________________________________________________
consensus ATAAGCAATTAAGGCTGACATGTGTGCTTTTGGCGTAGTGGTAAGCGTTCGATCCTAACA
 
. : . : . : . : . : . :
JMSF051C24+ ATGTGCCAAATG
JMSF042N18+ GAATATGTCTCGGATTGTGAGGTTTATATATAATTATGAAATATAATAATGTACCAAATG
                      ____________________________________________________________
consensus GAATATGTCTCGGATTGTGAGGTTTATATATAATTATGAAATATAATAATGTGCCAAATG
 
. : . : . : . : . : . :
JMSF051C24+ GGGTGGAGGAAAGTTTGATGGCTGGGACAGGAGGCATGTCTAGGCTCATTCTTCCACTAC
JMSF042N18+ GGGTGGAGGAAAGTTTGATGGCTGGGACAGGAGGCATGTCTAGGCTCATTCTTCCACTAC
                      ____________________________________________________________
consensus GGGTGGAGGAAAGTTTGATGGCTGGGACAGGAGGCATGTCTAGGCTCATTCTTCCACTAC
 
. : . : . : . : . : . :
JMSF051C24+ TTCTCCAGGCTTGATTGTTGCAGCCCTGTCTAAGAAGCTTGTGGGAGAAAGTGGGACCAT
JMSF042N18+ TTCTCCAGGCTTGATTGTTGCAGCCCTGTCTAAGAAGCTTGTGGGAGAAAGTGGGACCAT
                      ____________________________________________________________
consensus TTCTCCAGGCTTGATTGTTGCAGCCCTGTCTAAGAAGCTTGTGGGAGAAAGTGGGACCAT
 
. : . : . : . : . : . :
JMSF051C24+ TATTATTGTTGTGGCAATTAGAAACTTGATGATGATCATTGGAACCGGCAAAATAGTTTG
JMSF042N18+ TATTATTGTTGTGGCAATTAGAAACTTGATGATGATCATTGGAACCGGCAAAATAGTTTG
                      ____________________________________________________________
consensus TATTATTGTTGTGGCAATTAGAAACTTGATGATGATCATTGGAACCGGCAAAATAGTTTG
 
. : . : . : . : . : . :
JMSF051C24+ CAGCCTCAAAGACATCAAGCTCTCCTGACTCATTTCTCCAGTGGAACAATTTCTTGGACA
JMSF042N18+ CAGCCTCAAAGACATCAAGCTCTCCTGACTCATTTCTCCAGTGGAACAATTTCTTGGACA
                      ____________________________________________________________
consensus CAGCCTCAAAGACATCAAGCTCTCCTGACTCATTTCTCCAGTGGAACAATTTCTTGGACA
 
. : . : . : . : . : . :
JMSF051C24+ TTTTCTGATGAGCTTCAATTCTTGCTTAGTGTCCTATGGGTGGTGGGTGGCTATAAGTAT
JMSF042N18+ TTTTCTGATGAGCTTCAATTCTTGCTTAGTGTCCTATGGGTGGTGGGTGGCTATAAGTAT
                      ____________________________________________________________
consensus TTTTCTGATGAGCTTCAATTCTTGCTTAGTGTCCTATGGGTGGTGGGTGGCTATAAGTAT
 
. : . : . : . : . : . :
JMSF051C24+ ATATATATATATAGGTATGAATGTAAGTGTGAAATGAAAGGTATAGAGCTGAGATGT
JMSF042N18+ ATATATATATATAGGTATGAATGTAAGTGTGAAATGAAAGGTATAGAGCTGAGATGTGTC
                      ____________________________________________________________
consensus ATATATATATATAGGTATGAATGTAAGTGTGAAATGAAAGGTATAGAGCTGAGATGTGTC