Contig 010834:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN038I11Sequence616010834 (4)ref|XP_009759470.1|249PREDICTED: uncharacterized protein LOC104212002 [Nicotiana sylvestris]
JMSF039D11Sequence682010834 (4)ref|XP_009759470.1|301PREDICTED: uncharacterized protein LOC104212002 [Nicotiana sylvestris]761010834 (4)ref|XP_009759470.1|283PREDICTED: uncharacterized protein LOC104212002 [Nicotiana sylvestris]
JMSF040D11Sequence490010834 (4)gb|KCW62109.1|4e-64hypothetical protein EUGRSUZ_H04779 [Eucalyptus grandis]

Alignment

This contig is upended


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rJMSF039D11-                                                 ATTATTGTCAACATCCACTCA
                      ____________________________________________________________
consensus                                                    ATTATTGTCAACATCCACTCA
 
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JMFN038I11+                                                     TCTGTATGATCTTACTCA
rJMSF039D11-          GTCAAACCCGTGCACAGGATTTTCCTAGCGTGATTTACATCTTCTGTATGATCTTACTCA
                      ____________________________________________________________
consensus             GTCAAACCCGTGCACAGGATTTTCCTAGCGTGATTTACATCTTCTGTATGATCTTACTCA
 
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JMFN038I11+           ACAAAATTAATGTGNTTCATAAATCTGTTGAAGTTGCCTTCATAAAAATTCAAAAACCAC
JMSF040D11+                                                   CATAAAAATTCAAAAACCAC
rJMSF039D11-          ACAAAATTAATGTTGTTCATAAATCTGTTGAAGTTGCCTTCATAAAAATTCAAAAACCAC
JMSF039D11+                                                   CATAAAAATTCAAAAACCAC
                      ____________________________________________________________
consensus             ACAAAATTAATGTTGTTCATAAATCTGTTGAAGTTGCCTTCATAAAAATTCAAAAACCAC
 
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JMFN038I11+           TCTAGAAATACAAACTTTATACTCTGCATTATTCTCTAGTATTATCTGAAAGAATCAGAA
JMSF040D11+           TCTAGAAATACAAACTTTATACTCTGCATTATTCTCTAGTATTATCTGAAAGAATCAGAA
rJMSF039D11-          TCTAGAAATACAAACTTTATACTCTGCATTATTCTCTAGTATTATCTGAAAGAATCAGAA
JMSF039D11+           TCTAGAAATACAAACTTTATACTCTGCATTATTCTCTAGTATTATCTGAAAGAATCAGAA
                      ____________________________________________________________
consensus             TCTAGAAATACAAACTTTATACTCTGCATTATTCTCTAGTATTATCTGAAAGAATCAGAA
 
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JMFN038I11+           TGGCAAATCCAAGAGGGATAGAGAGTTTCAGTTATTCTCCACACTATCTGATTTTTGAGA
JMSF040D11+           TGGCAAATCCAAGAGGGATAGAGAGTTTCAGTTATTCTCCACACTATCTGATTTTTGAGA
rJMSF039D11-          TGGCAAATCCAAGAGGGATAGAGAGTTTCAGTTATTCTCCACACTATCTGATTTTTGAGA
JMSF039D11+           TGGCAAATCCAAGAGGGATAGAGAGTTTCAGTTATTCTCCACACTATCTGATTTTTGAGA
                      ____________________________________________________________
consensus             TGGCAAATCCAAGAGGGATAGAGAGTTTCAGTTATTCTCCACACTATCTGATTTTTGAGA
 
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JMFN038I11+           CATAAGATCAGGGCATGACACACAAGCTGTTGGAGGGGGCAAGTCGTCCGAAACAGTGAT
JMSF040D11+           CATAAGATCAGGGCATGACACACAAGCTGTTGGAGGGGGCAAGTCGTCCGAAACAGTGAT
rJMSF039D11-          CATAAGATCAGGGCATGACACACAAGCTGTTGGAGGGGGCAAGTCGTCCGAAACAGTGAT
JMSF039D11+           CATAAGATCAGGGCATGACACACAAGCTGTTGGAGGGGGCAAGTCGTCCGAAACAGTGAT
                      ____________________________________________________________
consensus             CATAAGATCAGGGCATGACACACAAGCTGTTGGAGGGGGCAAGTCGTCCGAAACAGTGAT
 
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JMFN038I11+           TCGAAAAGTTTGCTGCTTCTCCTCGTTTCCAGGGACGTGGACGAGAGCTTCCATGATGAG
JMSF040D11+           TCGAAAAGTTTGCTGCTTCTCCTCGTTTCCAGGGACGTGGACGAGAGCTTCCATGATGAG
rJMSF039D11-          TCGAAAAGTTTGCTGCTTCTCCTCGTTTCCAGGGACGTGGACGAGAGCTTCCATGATGAG
JMSF039D11+           TCGAAAAGTTTGCTGCTTCTCCTCGTTTCCAGGGACGTGGACGAGAGCTTCCATGATGAG
                      ____________________________________________________________
consensus             TCGAAAAGTTTGCTGCTTCTCCTCGTTTCCAGGGACGTGGACGAGAGCTTCCATGATGAG
 
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JMFN038I11+           GATTTCCCAGTCACGGGGCCGTAAGAATGACATCCATGTATCGTTTCCATTACGAACTGC
JMSF040D11+           GATTTCCCAGTCACGGGGCCGTAAGAATGACATCCATGTATCGTTTCCATTACGAACTGC
rJMSF039D11-          GATTTCCCAGTCACGGGGCCGTAAGAATGACATCCATGTATCGTTTCCATTACGAACTGC
JMSF039D11+           GATTTCCCAGTCACGGGGCCGTAAGAATGACATCCATGTATCGTTTCCATTACGAACTGC
                      ____________________________________________________________
consensus             GATTTCCCAGTCACGGGGCCGTAAGAATGACATCCATGTATCGTTTCCATTACGAACTGC
 
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JMFN038I11+           CTTCAGCTGAAAGATCCCAGAGCCCTGAGGTCCTGATACAGGAAACGTGCACGATACAGA
JMSF040D11+           CTTCAGCTGAAAGATCCCAGAGCCCTGAGGTCCTGATACAGGAAACGTGCACGATACAGA
rJMSF039D11-          CTTCAGCTGAAAGATCCCAGAGCCCTGAGGTCCTGATACAGGAAACGTGCACGATACAGA
JMSF039D11+           CTTCAGCTGAAAGATCCCAGAGCCCTGAGGTCCTGATACAGGAAACGTGCACGATACAGA
                      ____________________________________________________________
consensus             CTTCAGCTGAAAGATCCCAGAGCCCTGAGGTCCTGATACAGGAAACGTGCACGATACAGA
 
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JMFN038I11+           CTGCCTTTGGTGAGCTAGTCCTAGCGACGCATTATACCAAGGTCCTCTAACGATGGGCTC
JMSF040D11+           CTGCCTTTGGTGAGCTAGTCCTAGCGACGCATTATACCAAGGTCCTCTAACGATGGGCTC
rJMSF039D11-          CTGCCTTTGGTGAGCTAGTCCTAGCGACGCATTATACCAAGGTCCTCTAACGATGGGCTC
JMSF039D11+           CTGCCTTTGGTGAGCTAGTCCTAGCGACGCATTATACCAAGGTCCTCTAACGATGGGCTC
                      ____________________________________________________________
consensus             CTGCCTTTGGTGAGCTAGTCCTAGCGACGCATTATACCAAGGTCCTCTAACGATGGGCTC
 
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JMFN038I11+           TCCTATAGCTTCTATTATGGCCTTGTTCTTACTGGCTTTCTCTAAGGCCTTGCTGCTACA
JMSF040D11+           TCCTATAGCTTCTATTATGGCCTTGTTCTTACTGGCTTTCTCTAAGGCCT          
rJMSF039D11-          TCCTATAGCTTCTATTATGGCCTTGTTCTTACTGGCTTTCTCTAAGGCCTTGCTGCTACA
JMSF039D11+           TCCTATAGCTTCTATTATGGCCTTGTTCTTACTGGCTTTCTCTAAGGCCTTGCTGCTACA
                      ____________________________________________________________
consensus             TCCTATAGCTTCTATTATGGCCTTGTTCTTACTGGCTTTCTCTAAGGCCTTGCTGCTACA
 
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JMFN038I11+           GCTGTGATATATAGAGAGATCATCGAGGGCGCTAAGAGCAAAACCTCCTGTTACGCAG  
rJMSF039D11-          GCTGTGATATATAGAGAGATCATCGAGGGCGCTAAGAGCAAAACCTCCTGTTACGCAGAT
JMSF039D11+           GCTGTGATATATAGAGAGATCATCGAGGGCGCTAAGAGCAAAACCTCCTGTTACGCAGAT
                      ____________________________________________________________
consensus             GCTGTGATATATAGAGAGATCATCGAGGGCGCTAAGAGCAAAACCTCCTGTTACGCAGAT
 
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rJMSF039D11-          CAATGTTCCCGATACTATCCTCCGCCCCCACGTTTTTGCGCCGCTTTCCTCTACCTCGCT
JMSF039D11+           CAATGTTCCCGATACTATCCTCCGCCCCCACGTTTTTGCGCCGCTTTCCTCTACCTCGCT
                      ____________________________________________________________
consensus             CAATGTTCCCGATACTATCCTCCGCCCCCACGTTTTTGCGCCGCTTTCCTCTACCTCGCT
 
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rJMSF039D11-          CGTTGTCGAAGGACTGCGCT                                        
JMSF039D11+           CGTTGTCGAAGGACTGCGCTTCAAGAACGAGAGGAACCTTCTTCCAGACATTGTTAATTC
                      ____________________________________________________________
consensus             CGTTGTCGAAGGACTGCGCTTCAAGAACGAGAGGAACCTTCTTCCAGACATTGTTAATTC