Contig 010800:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007E24Sequence381010800 (4)ref|XP_011073375.1|89.0PREDICTED: uncharacterized protein LOC105158344 [Sesamum indicum]785014125 (4)ref|XP_009619537.1|293PREDICTED: uncharacterized protein LOC104111530 [Nicotiana tomentosiformis]
JMSF034O23Sequence704010800 (4)ref|XP_007023340.1|2e-32Uncharacterized protein TCM_027327 [Theobroma cacao] gb|EOY25962.1| Uncharacteri590014125 (4)ref|XP_009619537.1|255PREDICTED: uncharacterized protein LOC104111530 [Nicotiana tomentosiformis]
JMSF046P02Sequence761010800 (4)ref|XP_007023340.1|6e-40Uncharacterized protein TCM_027327 [Theobroma cacao] gb|EOY25962.1| Uncharacteri750014125 (4)ref|XP_009619537.1|223PREDICTED: uncharacterized protein LOC104111530 [Nicotiana tomentosiformis]
JMSF051E14Sequence690010800 (4)ref|XP_007023340.1|3e-33Uncharacterized protein TCM_027327 [Theobroma cacao] gb|EOY25962.1| Uncharacteri727014125 (4)ref|XP_009619537.1|279PREDICTED: uncharacterized protein LOC104111530 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF046P02+                             TNTTAGTTTGTAGACCGTGGAATCTGCTTGGGCCACAACAAA
                      ____________________________________________________________
consensus                               TNTTAGTTTGTAGACCGTGGAATCTGCTTGGGCCACAACAAA
 
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JMSF051E14+                           GTACTACCGTAAAACTTGTCTTGTCCAGTATACAGAACCGCAGA
JMSF046P02+           GTCCATCGTGTCTCTTGTACTACCGTAAAACTTGTCTTGTCCAGTATACAGAACCGCAGA
JMSF034O23+                           GTACTACCGTAAAACTTGTCTTGTCCAGTATACAGAACCGCAGA
                      ____________________________________________________________
consensus             GTCCATCGTGTCTCTTGTACTACCGTAAAACTTGTCTTGTCCAGTATACAGAACCGCAGA
 
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JMSF051E14+           GCCAATGATTGCAGCAACAGTAAATAACGCCAGAAAGGCAAGTGAAAGTGCATAAGCACT
JMSF046P02+           GCCAATGATTGCAGCAACAGTAAATAACGCCAGAAAGGCAAGTGAAAGTGCATAAGCACT
JMSF034O23+           GCCAATGATTGCAGCAACAGTAAATAACGCCAGAAAGGCAAGTGAAAGTGCATAAGCACT
                      ____________________________________________________________
consensus             GCCAATGATTGCAGCAACAGTAAATAACGCCAGAAAGGCAAGTGAAAGTGCATAAGCACT
 
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JMSF051E14+           TCGGGAGTAACCATAACGAGTTTTCCCGCAGCAGCAACAGCAAAGACAGACTAACAGCAA
JMSF046P02+           TCGGGAGTAACCATAACGAGTTTTCCCGCAGCAGCAACAGCAAAGACAGACTAACAGCAA
JMSF034O23+           TCGGGAGTAACCATAACGAGTTTTCCCGCAGCAGCAACAGCAAAGACAGACTAACAGCAA
                      ____________________________________________________________
consensus             TCGGGAGTAACCATAACGAGTTTTCCCGCAGCAGCAACAGCAAAGACAGACTAACAGCAA
 
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JMSF051E14+           CGCAACGCCAAATCCCAAAAACCAAACAGCAGCGATGAAGAAAAGCGGGGCACCAGTAAA
JMSF007E24+                                                               CCAGTAAA
JMSF046P02+           CGCAACGCCAAATCCCAAAAACCAAACAGCAGCGATGAAGAAAAGCGGGGCACCAGTAAA
JMSF034O23+           CGCAACGCCAAATCCCAAAAACCAAACAGCAGCGATGAAGAAAAGCGGGGCACCAGTAAA
                      ____________________________________________________________
consensus             CGCAACGCCAAATCCCAAAAACCAAACAGCAGCGATGAAGAAAAGCGGGGCACCAGTAAA
 
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JMSF051E14+           AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
JMSF007E24+           AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
JMSF046P02+           AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
JMSF034O23+           AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
                      ____________________________________________________________
consensus             AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
 
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JMSF051E14+           CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
JMSF007E24+           CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
JMSF046P02+           CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
JMSF034O23+           CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
                      ____________________________________________________________
consensus             CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
 
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JMSF051E14+           ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
JMSF007E24+           ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
JMSF046P02+           ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
JMSF034O23+           ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
                      ____________________________________________________________
consensus             ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
 
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JMSF051E14+           CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
JMSF007E24+           CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
JMSF046P02+           CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
JMSF034O23+           CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
                      ____________________________________________________________
consensus             CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
 
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JMSF051E14+           AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
JMSF007E24+           AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
JMSF046P02+           AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
JMSF034O23+           AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
                      ____________________________________________________________
consensus             AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
 
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JMSF051E14+           ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
JMSF007E24+           ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
JMSF046P02+           ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
JMSF034O23+           ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
                      ____________________________________________________________
consensus             ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
 
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JMSF051E14+           AATTCTTGTATTGGGTATTGTTTTTCACTATTTTCTTGACTTTATACGGGAAAAGAAAAG
JMSF007E24+           AATTCTTGTATT                                                
JMSF046P02+           AATTCTTGTATTGGGTATTGTTTTTCACTATTTTCTTGACTTTATACGGGAAAAGAAAAG
JMSF034O23+           AATTCTTGTATTGGGTATTGTTTTTCACTATTTTCTTGACTTTATACGGGAAAAGAAAAG
                      ____________________________________________________________
consensus             AATTCTTGTATTGGGTATTGTTTTTCACTATTTTCTTGACTTTATACGGGAAAAGAAAAG
 
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JMSF051E14+           AAGCTCAGTGGTCTCTTCAGGAAGGAAGCCAAAAAGGGAATT                  
JMSF046P02+           AAGCTCAGTGGTCTCTTCAGGAAGGAAGCCAAAAAGGGAATTCAGAATTCTTGCCGT   
JMSF034O23+           AAGCTCAGTGGTCTCTTCAGGAAGGAAGCCAAAAAGGGAATTCAGAATTCTTGCCGTGTC
                      ____________________________________________________________
consensus             AAGCTCAGTGGTCTCTTCAGGAAGGAAGCCAAAAAGGGAATTCAGAATTCTTGCCGTGTC