Contig 010794:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039C16Sequence480010794 (5)718002853 (5)ref|XP_010323795.1|4e-19PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum]
JMFF042D08Sequence652010794 (5)ref|XP_006449140.1|6e-08hypothetical protein CICLE_v10015528mg [Citrus clementina] gb|ESR62380.1| hypoth616002853 (5)ref|XP_009624518.1|3e-14PREDICTED: mediator-associated protein 1-like [Nicotiana tomentosiformis]
JMSF022N14Sequence674010794 (5)ref|XP_010109556.1|4e-12hypothetical protein L484_018291 [Morus notabilis] gb|EXC23160.1| hypothetical p793002853 (5)ref|XP_010323795.1|2e-16PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum]
JMSF034H03Sequence625010794 (5)723002853 (5)ref|XP_010323795.1|5e-20PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum]
JMSF048I09Sequence708010794 (5)ref|XP_010109556.1|2e-15hypothetical protein L484_018291 [Morus notabilis] gb|EXC23160.1| hypothetical p761002853 (5)ref|XP_010323795.1|2e-16PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048I09+ GAGTTCTGGAAATATCAGCCTGTAATTTCCC
                      ____________________________________________________________
consensus GAGTTCTGGAAATATCAGCCTGTAATTTCCC
 
. : . : . : . : . : . :
JMSF022N14+ AATAAATTCATGGAAAGCAGACAAATCAGCAGAAGGGTCAGCCCCTTTTTGGTTCTT
JMFF042D08+ GCAGACAAATCAGCAGAAGGGTCAGCCCCTTTTTGGTTCTT
JMSF048I09+ CTTAATAAATTCATGGAAAGCAGACAAATCAGCAGAAGGGTCAGCCCCTTTTTGGTTCTT
                      ____________________________________________________________
consensus CTTAATAAATTCATGGAAAGCAGACAAATCAGCAGAAGGGTCAGCCCCTTTTTGGTTCTT
 
. : . : . : . : . : . :
JMSF022N14+ GTAATCAATCATACCTTCTAGAACAGCAATTTCATCGTCCTCGTTCCACACCCTGTTAAA
JMFF042D08+ GTAATCAATCATACCTTCTAGAACAGCAATTTCATCGTCCTCGTTCCACACCCTGTTAAA
JMSF048I09+ GTAATCAATCATACCTTCTAGAACAGCAATTTCATCGTCCTCGTTCCACACCCTGTTAAA
                      ____________________________________________________________
consensus GTAATCAATCATACCTTCTAGAACAGCAATTTCATCGTCCTCGTTCCACACCCTGTTAAA
 
. : . : . : . : . : . :
JMSF022N14+ CCCGGCAGAAGCCGAACCTGGAACCTTCTTCTCCTCCGCATTCCCATCTTCTTCCCCGGA
JMFF042D08+ CCCGGCAGAAGCCGAACCTGGAACCTTCTTCTCCTCCGCATTCCCATCTTCTTCCCCGGA
JMSF048I09+ CCCGGCAGAAGCCGAACCTGGAACCTTCTTCTCCTCCGCATTCCCATCTTCTTCCCCGGA
JMSF034H03+ CCGCATTCCCATCTTCTTCCCCGGA
                      ____________________________________________________________
consensus CCCGGCAGAAGCCGAACCTGGAACCTTCTTCTCCTCCGCATTCCCATCTTCTTCCCCGGA
 
. : . : . : . : . : . :
JMSF022N14+ CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
JMFF042D08+ CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
JMFF039C16+ GCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
JMSF048I09+ CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
JMSF034H03+ CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
                      ____________________________________________________________
consensus CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
 
. : . : . : . : . : . :
JMSF022N14+ CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
JMFF042D08+ CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
JMFF039C16+ CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
JMSF048I09+ CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
JMSF034H03+ CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
                      ____________________________________________________________
consensus CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
 
. : . : . : . : . : . :
JMSF022N14+ ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
JMFF042D08+ ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
JMFF039C16+ ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
JMSF048I09+ ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
JMSF034H03+ ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
                      ____________________________________________________________
consensus ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
 
. : . : . : . : . : . :
JMSF022N14+ TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
JMFF042D08+ TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
JMFF039C16+ TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
JMSF048I09+ TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
JMSF034H03+ TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
                      ____________________________________________________________
consensus TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
 
. : . : . : . : . : . :
JMSF022N14+ GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
JMFF042D08+ GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
JMFF039C16+ GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
JMSF048I09+ GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
JMSF034H03+ GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
                      ____________________________________________________________
consensus GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
 
. : . : . : . : . : . :
JMSF022N14+ TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
JMFF042D08+ TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
JMFF039C16+ TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
JMSF048I09+ TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
JMSF034H03+ TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
                      ____________________________________________________________
consensus TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
 
. : . : . : . : . : . :
JMSF022N14+ GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
JMFF042D08+ GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
JMFF039C16+ GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
JMSF048I09+ GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
JMSF034H03+ GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
                      ____________________________________________________________
consensus GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
 
. : . : . : . : . : . :
JMSF022N14+ CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
JMFF042D08+ CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
JMFF039C16+ CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
JMSF048I09+ CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
JMSF034H03+ CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
                      ____________________________________________________________
consensus CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
 
. : . : . : . : . : . :
JMSF022N14+ GGAGAGCAACTAGTAC
JMFF042D08+ GGAGAGCAACT
JMFF039C16+ GGAGAGCAACTAGTAC
JMSF048I09+ GGAGAGCAACTAGTAC
JMSF034H03+ GGAGAGCAACTAGTACGAGCGGCTTGTTTAGGGTTTTGCATTATATATACTCCTCAAACA
                      ____________________________________________________________
consensus GGAGAGCAACTAGTACGAGCGGCTTGTTTAGGGTTTTGCATTATATATACTCCTCAAACA
 
. : . : . : . : . : . :
JMSF034H03+ TCGTACCTGTAAAGTTTGAGCCCATTTATGTCCGGCTTTTTAAATTGTTCTGCTTCCCCC
                      ____________________________________________________________
consensus TCGTACCTGTAAAGTTTGAGCCCATTTATGTCCGGCTTTTTAAATTGTTCTGCTTCCCCC