Contig 010793:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011E18Sequence452010793 (2)ref|XP_009609263.1|1e-05PREDICTED: probable protein phosphatase 2C 33, partial [Nicotiana tomentosiform692001058 (2)ref|XP_009783863.1|1e-08PREDICTED: probable protein phosphatase 2C 33 [Nicotiana sylvestris]
JMSF034F21Sequence593010793 (2)ref|XP_009766558.1|6e-15PREDICTED: probable protein phosphatase 2C 33 [Nicotiana sylvestris]630001058 (2)ref|XP_009783863.1|5e-09PREDICTED: probable protein phosphatase 2C 33 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF034F21+                  GAATCCGGTGCAAATGCTCCTCCCTCCTGTAATCAAACGAAGAATTCCGAGAC
                      ____________________________________________________________
consensus                    GAATCCGGTGCAAATGCTCCTCCCTCCTGTAATCAAACGAAGAATTCCGAGAC
 
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JMFF011E18+                                                CAATAGCAGACATGGGAGAACCC
JMSF034F21+           GCTGCCCTCCTCTTGAAGCTTTTCTTCTTCTGAATCCCAATAGCAGACATGGGAGAACCC
                      ____________________________________________________________
consensus             GCTGCCCTCCTCTTGAAGCTTTTCTTCTTCTGAATCCCAATAGCAGACATGGGAGAACCC
 
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JMFF011E18+           GGATGNGGGNTCNTGCTTTCAGAAGAAAAGCAGGACCCCATCCGGAGGGCCCTCAATATA
JMSF034F21+           GGATGCGGGCTCCTGCTTTCAGAAGAAAAGCAGGACCCCATCCGGAGGGCCCTCAATATA
                      ____________________________________________________________
consensus             GGATGCGGGCTCCTGCTTTCAGAAGAAAAGCAGGACCCCATCCGGAGGGCCCTCAATATA
 
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JMFF011E18+           TTCGATAAGCAATCCAGAACAGATAAACAATCACAACCCCTATTTTCCGTATTTGCCTCC
JMSF034F21+           TTCGATAAGCAATCCAGAACAGATAAACAATCACAACCCCTATTTTCCGTATTTGCCTCC
                      ____________________________________________________________
consensus             TTCGATAAGCAATCCAGAACAGATAAACAATCACAACCCCTATTTTCCGTATTTGCCTCC
 
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JMFF011E18+           GTCACAGCCCTCCTAATAATACCCTCTCTGAGCTCTTCAGACCACTTTCCCCAATCCAAT
JMSF034F21+           GTCACAGCCCTCCTAATAATACCCTCTCTGAGCTCTTCAGACCACTTTCCCCAATCCAAT
                      ____________________________________________________________
consensus             GTCACAGCCCTCCTAATAATACCCTCTCTGAGCTCTTCAGACCACTTTCCCCAATCCAAT
 
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JMFF011E18+           CAAATCACCCTTGCATCCACTGCCAAATCCAATAAACTTCAACTAGGAAACAGCACAATA
JMSF034F21+           CAAATCACCCTTGCATCCACTGCCAAATCCAATAAACTTCAACTAGGAAACAGCACAATA
                      ____________________________________________________________
consensus             CAAATCACCCTTGCATCCACTGCCAAATCCAATAAACTTCAACTAGGAAACAGCACAATA
 
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JMFF011E18+           ATCCAATCCCCCAAATTTGTTTCAGCCTCAAAAGGCAACTAACTTTTAATACCACACCCG
JMSF034F21+           ATCCAATCCCCCAAATTTGTTTCAGCCTCAAAAGGCAACTAACTTTTAATACCACACCCG
                      ____________________________________________________________
consensus             ATCCAATCCCCCAAATTTGTTTCAGCCTCAAAAGGCAACTAACTTTTAATACCACACCCG
 
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JMFF011E18+           CCTGTCTTTTTCCTGCAAAAACAGACAAGTTAACGGGAAGATGAACGAACAAAACGGGCA
JMSF034F21+           CCTGTCTTTTTCCTGCAAAAACAGACAAGTTAACGGGAAGATGAACGAACAAAACGGGCA
                      ____________________________________________________________
consensus             CCTGTCTTTTTCCTGCAAAAACAGACAAGTTAACGGGAAGATGAACGAACAAAACGGGCA
 
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JMFF011E18+           GAGAGAAACGAGGAGAGGATTGAGATTTGCAAAAGAATCGCCGATAGGACTTATTACAAG
JMSF034F21+           GAGAGAAACGAGGAGAGGATTGAGATTTGCAAAAGAATCGCCGATAGGACTTATTACAAG
                      ____________________________________________________________
consensus             GAGAGAAACGAGGAGAGGATTGAGATTTGCAAAAGAATCGCCGATAGGACTTATTACAAG
 
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JMFF011E18+           TTTGGCAAT                                                   
JMSF034F21+           TTTGGCAATAAATGTAGCACTACATCCATGAATGTGTATAAGATACGTATGTATGTTGTC
                      ____________________________________________________________
consensus             TTTGGCAATAAATGTAGCACTACATCCATGAATGTGTATAAGATACGTATGTATGTTGTC