Contig 010782: Sequence
BLAST Hits against nr-aa DB Show
| clone | 5'-sequence | 3'-sequence |
|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description |
|---|
| JMSF033A21 | Sequence | 409 | 010782 (2) | gb|EYU26259.1| | 2e-26 | hypothetical protein MIMGU_mgv1a017602mg [Erythranthe guttata] gb|EYU38219.1| hy | 351 | 010782 (2) | gb|EYU26259.1| | 9e-27 | hypothetical protein MIMGU_mgv1a017602mg [Erythranthe guttata] gb|EYU38219.1| hy |
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF033A21+ GCTTTCAATTCTGCTGCCAAAACAGAAGCGACAATGGATGCTCAACCCG
JMSF033A21- GCTTTCAATTCTGCTGCCAAAACAGAAGCGACAATGGATGCTCAACCCG
____________________________________________________________
consensus GCTTTCAATTCTGCTGCCAAAACAGAAGCGACAATGGATGCTCAACCCG
. : . : . : . : . : . :
rJMSF033A21+ AACCCGTCAGTTATATCTGTGGAGATTGTGGACAAGATAATACTCTGAAGCAAGGCGATG
JMSF033A21- AACCCGTCAGTTATATCTGTGGAGATTGTGGACAAGATAATACTCTGAAGCAAGGCGATG
____________________________________________________________
consensus AACCCGTCAGTTATATCTGTGGAGATTGTGGACAAGATAATACTCTGAAGCAAGGCGATG
. : . : . : . : . : . :
rJMSF033A21+ TGATTCAGTGCCGTGAATGTGGTTATCGTATTCTCTACAAGAAGCGAACCCGCAGAATTG
JMSF033A21- TGATTCAGTGCCGTGAATGTGGTTATCGTATTCTCTACAAGAAGCGAACCCGCAGAATTG
____________________________________________________________
consensus TGATTCAGTGCCGTGAATGTGGTTATCGTATTCTCTACAAGAAGCGAACCCGCAGAATTG
. : . : . : . : . : . :
rJMSF033A21+ TGCAATATGAAGCTCGTTGACACTTAAGGTTTGGGTGCCAACAAACTGGAATGCTGCATT
JMSF033A21- TGCAATATGAAGCTCGTTGACACTTAAGGTTTGGGTGCCAACAAACTGGAATGCTGCATT
____________________________________________________________
consensus TGCAATATGAAGCTCGTTGACACTTAAGGTTTGGGTGCCAACAAACTGGAATGCTGCATT
. : . : . : . : . : . :
rJMSF033A21+ ACCTATAGTCTCTATTTCTTAAGGACACAGTATTAGATATTATTAGGTATGTAATGGTGC
JMSF033A21- ACCTATAGTCTCTATTTCTTAAGGACACAGTATTAGATATTATTAGGTATGTAATGGTGC
____________________________________________________________
consensus ACCTATAGTCTCTATTTCTTAAGGACACAGTATTAGATATTATTAGGTATGTAATGGTGC
. : . : . : . : . : . :
rJMSF033A21+ TATGTTTGAAAAAACTGCTTCCTGCTTCTCTATGCCTTTTGTTTGCAACTGTCGTTATAT
JMSF033A21- TATGTTTGAAAAAACTGCTTCCTGCTTCTCTATGCCTTTTGTTTGCAACTGTCGTTATAT
____________________________________________________________
consensus TATGTTTGAAAAAACTGCTTCCTGCTTCTCTATGCCTTTTGTTTGCAACTGTCGTTATAT
. : . : . : . : . : . :
rJMSF033A21+ TG
JMSF033A21- TGTGATTTCTTGAAGTGATTTGCAGGCAGCTTGTTTGCTGCAATTTGGTTAAAAAAAAAA
____________________________________________________________
consensus TGTGATTTCTTGAAGTGATTTGCAGGCAGCTTGTTTGCTGCAATTTGGTTAAAAAAAAAA