| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027G21 | Sequence | 531 | 010774 (9) | ref|XP_006347284.1| | 5e-33 | PREDICTED: uncharacterized protein LOC102594987 isoform X1 [Solanum tuberosum] | 581 | 010774 (9) | ref|XP_006347284.1| | 9e-33 | PREDICTED: uncharacterized protein LOC102594987 isoform X1 [Solanum tuberosum] |
| JMFN033A21 | Sequence | 610 | 010774 (9) | ref|XP_006347284.1| | 4e-32 | PREDICTED: uncharacterized protein LOC102594987 isoform X1 [Solanum tuberosum] | |||||
| JMFN034C17 | Sequence | 609 | 010774 (9) | ref|XP_006347284.1| | 4e-32 | PREDICTED: uncharacterized protein LOC102594987 isoform X1 [Solanum tuberosum] | |||||
| JMFN042E16 | Sequence | 618 | 010774 (9) | ref|XP_006347284.1| | 1e-30 | PREDICTED: uncharacterized protein LOC102594987 isoform X1 [Solanum tuberosum] | |||||
| JMSF020B07 | Sequence | 629 | 010774 (9) | ref|XP_006347284.1| | 5e-32 | PREDICTED: uncharacterized protein LOC102594987 isoform X1 [Solanum tuberosum] | 586 | 010774 (9) | ref|XP_006347284.1| | 3e-32 | PREDICTED: uncharacterized protein LOC102594987 isoform X1 [Solanum tuberosum] |
| JMSF032A18 | Sequence | 671 | 010774 (9) | ref|XP_006347284.1| | 2e-19 | PREDICTED: uncharacterized protein LOC102594987 isoform X1 [Solanum tuberosum] | 612 | 010774 (9) | ref|XP_006347284.1| | 2e-19 | PREDICTED: uncharacterized protein LOC102594987 isoform X1 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF032A18+ TTTTTTTTTTCGG
____________________________________________________________
consensus TTTTTTTTTTCGG
. : . : . : . : . : . :
rJMSF032A18- ACATTTAGTCTTTT
JMFN034C17+ AATGGAATCAACATTTAGTCTTTT
JMFN033A21+ TTAATAACAAACACAATGGAATCAACATTTAGTCTTTT
JMSF020B07+ TTAATAACAAACACAATGGAATCAACATTTAGTCTTTT
JMFN042E16+ ACACAATGGAATCAACATNTAGTC-TTT
JMSF032A18+ TAAAAAAAATGGATCCATGGAGTTAATAACAAACACAATGGAATCAACATTTAGTCTTTT
____________________________________________________________
consensus TAAAAAAAATGGATCCATGGAGTTAATAACAAACACAATGGAATCAACATTTAGTCTTTT
. : . : . : . : . : . :
rJMSF032A18- TGGGTTCAAAGAGCCACCCAACCTTA-TTTCTATTCTCACCTAGTTAAAACATGAGTTTC
rJMSF020B07- AAGAGCCACCCAACCTTA-TTTCTATTCTCACCTAGTTAAAACATGAGTTTC
rJMFF027G21- AAGAGCCACCCAACCTTA-TTTCTATTCTCACCTAGTTAAAACATGAGTTTC
JMFN034C17+ TGGGTTCAAAGAGCCACCCAACCTTA-TTTCTATTCTCACCTAGTTAAAACATGAGTTTC
JMFN033A21+ TGGGTTCAAAGAGCCACCCAACCTTATTTTATATTCTCACCTAGTTAAAACATGAGTTTC
JMSF020B07+ TGGGTTCAAAGAGCCACCCAACCTTA-TTTCTATTCTCACCTAGTTAAAACATGAGTTTC
JMFN042E16+ TGGGTTCAAAGAGCCACCCAACCTTA-TTTCTATTCTCACCTAGTTAAAACATGAGTTTC
JMFF027G21+ TAGTTAAAACANGAGTTTC
JMSF032A18+ TGGGTTCAAAGAGCCACCCAACCTTA-TTTCTATTCTCACCTAGTTAAAACATGAGTTTC
____________________________________________________________
consensus TGGGTTCAAAGAGCCACCCAACCTTA-TTTCTATTCTCACCTAGTTAAAACATGAGTTTC
. : . : . : . : . : . :
rJMSF032A18- TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
rJMSF020B07- TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
rJMFF027G21- TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
JMFN034C17+ TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
JMFN033A21+ TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
JMSF020B07+ TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
JMFN042E16+ TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
JMFF027G21+ TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
JMSF032A18+ TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
____________________________________________________________
consensus TTAAAAGGAAAAATTGGTGCATCAAGTTATCAGCTTTGCTATGAGCATACAGAGGAGGGG
. : . : . : . : . : . :
rJMSF032A18- CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
rJMSF020B07- CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
rJMFF027G21- CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
JMFN034C17+ CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
JMFN033A21+ CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
JMSF020B07+ CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
JMFN042E16+ CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
JMFF027G21+ CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
JMSF032A18+ CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
____________________________________________________________
consensus CCTTAAGCCACGAGTTTCTTGCACTAAATATTCAAACAGCAGCTGTTCCCTTGACTTATT
. : . : . : . : . : . :
rJMSF032A18- CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
rJMSF020B07- CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
rJMFF027G21- CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
JMFN034C17+ CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
JMFN033A21+ CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
JMSF020B07+ CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
JMFN042E16+ CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
JMFF027G21+ CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
JMSF032A18+ CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
____________________________________________________________
consensus CCCTATACGCTTCAGAGAATGAAGGGATTGCAAATATGCAGAATAGAATCATGAGCCACC
. : . : . : . : . : . :
rJMSF032A18- ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTTTGACATAAA
rJMSF020B07- ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTTTGACATAAA
rJMFF027G21- ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTCTGACATAAA
JMFN034C17+ ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTTTGACATAAA
JMFN033A21+ ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTTTGACATAAA
JMSF020B07+ ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTTTGACATAAA
JMFN042E16+ ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTTTGACATAAA
JMFF027G21+ ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTCTGACATAAA
JMSF032A18+ ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTTTGACATAAA
____________________________________________________________
consensus ACTATGAGCTTCCACTTTCCTTCTTCCTAGCTTCTTCCCTCATTACGGCTTTGACATAAA
. : . : . : . : . : . :
rJMSF032A18- TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
rJMSF020B07- TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
rJMFF027G21- TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
JMFN034C17+ TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
JMFN033A21+ TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
JMSF020B07+ TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
JMFN042E16+ TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
JMFF027G21+ TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
JMSF032A18+ TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
____________________________________________________________
consensus TTTCATAACAACACCCTGCTACGACAACAACAGTGAGAACATCTCCCACCCTCTTGAGGG
. : . : . : . : . : . :
rJMSF032A18- CTCGCACACCCTTTGTATTTGATTT-AAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
rJMSF020B07- CTCGCACACCCTTTGTATTTGATTTAAAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
rJMFF027G21- CTCGCACACCCTTTGTATTTGATTTAAAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
JMFN034C17+ CTCGCACACCCTTTGTATTTGATTTAAAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
JMFN033A21+ CTCGCACACCCTTTGTATTTGATTTAAAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
JMSF020B07+ CTCGCACACCCTTTGTATTTGATTTAAAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
JMFN042E16+ CTCGCACACCCTTTGTATTTGATTTAAAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
JMFF027G21+ CTCGCACACCCTTTGTATTTGATTTAAAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
JMSF032A18+ CTCGCACACCCTTTGTATTTGATTT-AAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
____________________________________________________________
consensus CTCGCACACCCTTTGTATTTGATTTAAAGCGTCTCAGTGACGAGTCGTCTGCTAGTAGAG
. : . : . : . : . : . :
rJMSF032A18- CCTTCTCGCGAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
rJMSF020B07- CCTTCTCGCGAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
rJMFF027G21- CCTTCTCGCGAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
JMFN034C17+ CCTTCTCGCGAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
JMFN033A21+ CCTTCTCGCGAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
JMSF020B07+ CCTTCTCGCGAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
JMFN042E16+ CCTTCTCGCAAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
JMFF027G21+ CCTTCTCGCGAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
JMSF032A18+ CCTTCTCGCGAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
____________________________________________________________
consensus CCTTCTCGCGAGCACCAGGTTCGATATGCAATCCACGTCTAGGCGCCACCAACGATGAAT
. : . : . : . : . : . :
rJMSF032A18- CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
rJMSF020B07- CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
rJMFF027G21- CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
JMFN034C17+ CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
JMFN033A21+ CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
JMSF020B07+ CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
JMFN042E16+ CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
JMFF027G21+ CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
JMSF032A18+ CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
____________________________________________________________
consensus CATCAGCCTTCTGTGAGTAAAGTCGGAGCTGAGAGAGAGCCGATTTGCCGACGGAGAACG
. : . : . : . : . : . :
rJMSF032A18- CCATCTTTTCCGAACAAACCAAAACCCTTGACAGAAATGATCTAAAGAGTGGCGAACACC
rJMSF020B07- CCATCTTTTCCGAACAAACCAAAACCCTTGACAGAAATGATC
rJMFF027G21- CCATCTTTTCCGAACAAACCAAAACCCTTGAC
JMFN034C17+ CCATCTTTTCCGAACAAACCAAAACCCTTGACAGAAATGATCTAAA
JMFN033A21+ CCATCTTTTCCGAACAAACCAAAACC
JMSF020B07+ CCATCTTTTCCGAACAAACCAAAACCCTTGACAGAAATGATC
JMFN042E16+ CCATCTTTTCCGAACAAACCAAAACCCTTGACAGAAATGATCTAAA
JMFF027G21+ CCATCTTTTCCGAACAAACCAAAACCCTTGAC
JMSF032A18+ CCATCTTTTCCGAACAAACCAAAACCCTTGACAGAAATGATCTAAAGAGTGGCGAACACC
____________________________________________________________
consensus CCATCTTTTCCGAACAAACCAAAACCCTTGACAGAAATGATCTAAAGAGTGGCGAACACC