Contig 010770:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009N13Sequence639010770 (6)ref|XP_002283598.1|8e-40PREDICTED: probable receptor-like protein kinase At5g47070 [Vitis vinifera]
JMSF017G16Sequence483010770 (6)ref|XP_002283598.1|4e-31PREDICTED: probable receptor-like protein kinase At5g47070 [Vitis vinifera]724010770 (6)ref|XP_002283598.1|3e-39PREDICTED: probable receptor-like protein kinase At5g47070 [Vitis vinifera]
JMSF031J01Sequence617010770 (6)ref|XP_002283598.1|1e-39PREDICTED: probable receptor-like protein kinase At5g47070 [Vitis vinifera]337010770 (6)emb|CDP09061.1|3e-24unnamed protein product [Coffea canephora]
JMSF038I02Sequence667010770 (6)ref|XP_010043546.1|5e-83PREDICTED: probable receptor-like protein kinase At5g47070 [Eucalyptus grandis]823019393ref|XP_011089472.1|3e-82PREDICTED: probable receptor-like protein kinase At5g47070 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF017G16-                                            ATAGATCGCTTCTCCTAGAAGTCCCT
                      ____________________________________________________________
consensus                                               ATAGATCGCTTCTCCTAGAAGTCCCT
 
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rJMSF017G16-          AAACTTATAAGTTTATGGTTATAAAGCTAGCTAATCAACTTGATTGGGGTTGTCCGAGTT
                      ____________________________________________________________
consensus             AAACTTATAAGTTTATGGTTATAAAGCTAGCTAATCAACTTGATTGGGGTTGTCCGAGTT
 
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rJMSF017G16-          TAAAGTCTTTTTCACTATAGTTTCCAAACTATCAGCACCTAAGTTTTATAGTGTTTTCTA
                      ____________________________________________________________
consensus             TAAAGTCTTTTTCACTATAGTTTCCAAACTATCAGCACCTAAGTTTTATAGTGTTTTCTA
 
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rJMSF017G16-          TAACAACAAATTACAGTATATTCTTTGATATGTTGGAATATTGCAGAAGGAACAGAAAGT
JMSF031J01+                                                         AAGGAACAGAAAGT
                      ____________________________________________________________
consensus             TAACAACAAATTACAGTATATTCTTTGATATGTTGGAATATTGCAGAAGGAACAGAAAGT
 
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rJMSF017G16-          TTGAATATTTGAAGTAAAGATTATGAATAGAGTGAAAATTAAAGGCATGCCTGGAAACCA
JMFN009N13+                                                            CCTGGAAACCA
JMSF038I02+                                                            CCTGGAAACCA
rJMSF031J01-                                                           CCTGGANACCA
JMSF031J01+           TTGAATATTTGAAGTAAAGATTATGAATAGAGTGAAAATTAAAGGCATGCCTGGAAACCA
                      ____________________________________________________________
consensus             TTGAATATTTGAAGTAAAGATTATGAATAGAGTGAAAATTAAAGGCATGCCTGGAAACCA
 
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rJMSF017G16-          TTGCGATTGAGCTGTTTAATAGCGACATCCACATTGGAATTGAAATCCGGGGCGGGGACG
JMFN009N13+           TTGCGATTGAGCTGTTTAATAGCGACATCCACATTGGAATTGAAATCCGGGGCGGGGACG
JMSF017G16+                                                                  GGACG
JMSF038I02+           TTGCGATTGAGCTGTTTAATAGCGACATCCACATTGGAATTGAAATCCGGGGCGGGGACG
rJMSF031J01-          TTGCGATTGAGCTGTTTAATAGCGACATCCACNTTGGAATTGAAATCCGGGGCGGGGACG
JMSF031J01+           TTGCGATTGAGCTGTTTAATAGCGACATCCACATTGGAATTGAAATCCGGGGCGGGGACG
                      ____________________________________________________________
consensus             TTGCGATTGAGCTGTTTAATAGCGACATCCACATTGGAATTGAAATCCGGGGCGGGGACG
 
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rJMSF017G16-          CTAACAACGCCTCTATAAACGCAGCCAAAGCCGCCTTCTCCGATCACCAGGGCGCGGCTG
JMFN009N13+           CTAACAACGCCTCTATAAACGCAGCCAAAGCCGCCTTCTCCGATCACCAGGGCGCGGCTG
JMSF017G16+           CTAACAACGCCTCTATAAACGCAGCCAAAGCCGCCTTCTCCGATCACCAGGGCGCGGCTG
JMSF038I02+           CTAACAACGCCTCTATAAACGCAGCCAAAGCCGCCTTCTCCGATCACCAGGGCGCGGCTG
rJMSF031J01-          CTAACAACGCCTCTATAANCGCAGCCGAAGCCGCCTTCTCCGATCACCAGGGCGCGGCTG
JMSF031J01+           CTAACAACGCCTCTATAAACGCAGCCAAAGCCGCCTTCTCCGATCACCAGGGCGCGGCTG
                      ____________________________________________________________
consensus             CTAACAACGCCTCTATAAACGCAGCCAAAGCCGCCTTCTCCGATCACCAGGGCGCGGCTG
 
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rJMSF017G16-          AACCCTCGGGTGGCGGATTTGAGATCGGCGAAGGTGAAAACTCGCAGATCGTTGGCCCGG
JMFN009N13+           AACCCTCGGGTGGCGGATTTGAGATCGGCGAAGGTGAAAACTCGCAGATCGTTGGCCCGG
JMSF017G16+           AACCCTCGGGTGGCGGATTTGAGATCGGCGAAGGTGAAAACTCGCAGATCGTTGGCCCGG
JMSF038I02+           AACCCTCGGGTGGCGGATTTGAGATCGGCGAAGGTGAAAACTCGCAGATCGTTGGCCCGG
rJMSF031J01-          AACCCTCGGGTGGCGGATTTGACATCGGCGAANGTGAANACTCNCATATCGTTGGCCCGG
JMSF031J01+           AACCCTCGGGTGGCGGATTTGAGATCGGCGAAGGTGAAAACTCGCAGATCGTTGGCCCGG
                      ____________________________________________________________
consensus             AACCCTCGGGTGGCGGATTTGAGATCGGCGAAGGTGAAAACTCGCAGATCGTTGGCCCGG
 
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rJMSF017G16-          CGCTGGGCCAGGAGCTGGTAGAAGCAGAGCGAGTCGGTGAAGTCCCTGGAGTCCGAGTCA
JMFN009N13+           CGCTGGGCCAGGAGCTGGTAGAAGCAGAGCGAGTCGGTGAAGTCCCTGGAGTCCGAGTCA
JMSF017G16+           CGCTGGGCCAGGAGCTGGTAGAAGCAGAGCGAGTCGGTGAAGTCCCTGGAGTCCGAGTCA
JMSF038I02+           CGCTGGGCCAGGAGCTGGTAGAAGCAGAGCGAGTCGGTGAAGTCCCTGGAGTCCGAGTCA
rJMSF031J01-          CGCTGGGCCANGANCTGGTA                                        
JMSF031J01+           CGCTGGGCCAGGAGCTGGTAGAAGCAGAGCGAGTCGGTGAAGTCCCTGGAGTCCGAGTCA
                      ____________________________________________________________
consensus             CGCTGGGCCAGGAGCTGGTAGAAGCAGAGCGAGTCGGTGAAGTCCCTGGAGTCCGAGTCA
 
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rJMSF017G16-          AACTCGGAGCGCCGAGTCGAGTCGACGCTGCTGGAAGCCACACTGAGGGACCGCGCCCAC
JMFN009N13+           AACTCGGAGCGCCGAGTCGAGTCGACGCTGCTGGAAGCCACACTGAGGGACCGCGCCCAC
JMSF017G16+           AACTCGGAGCGCCGAGTCGAGTCGACGCTGCTGGAAGCCACACTGAGGGACCGCGCCCAC
JMSF038I02+           AACTCGGAGCGCCGAGTCGAGTCGACGCTGCTGGAAGCCACACTGAGGGACCGCGCCCAC
JMSF031J01+           AACTCGGAGCGCCGAGTCGAGTCGACGCTGCTGGAAGCCACACTGAGGGACCGCGCCCAC
                      ____________________________________________________________
consensus             AACTCGGAGCGCCGAGTCGAGTCGACGCTGCTGGAAGCCACACTGAGGGACCGCGCCCAC
 
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rJMSF017G16-          GACACCTTGGAAGACCGGGAGCTTGAAACGACGCCGTCCTCGTCTTCCTCCTTCCTCTCC
JMFN009N13+           GACACCTTGGAAGACCGGGAGCTTGAAACGACGCCGTCCTCGTCTTCCTCCTTCCTCTCC
JMSF017G16+           GACACCTTGGAAGACCGGGAGCTTGAAACGACGCCGTCCTCGTCTTCCTCCTTCCTCTCC
JMSF038I02+           GACACCTTGGAAGACCGGGAGCTTGAAACGACGCCGTCCTCGTCTTCCTCCTTCCTCTCC
JMSF031J01+           GACACCTTGGAAGACCGGGAGCTTGAAACGACGCCGTCCTCGTCTTCCTCCTTCCTCTCC
                      ____________________________________________________________
consensus             GACACCTTGGAAGACCGGGAGCTTGAAACGACGCCGTCCTCGTCTTCCTCCTTCCTCTCC
 
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rJMSF017G16-          CCATTCGTGAAGTGAAAGCATTTCATCTTCTCTCAGGGCAATTCTCTTCAAGAAAACATG
JMFN009N13+           CCATTCGTGAAGTGAAAGCATTTCATCTTCTCTCAGGGCAATTCTCTTCAAGAAAACATG
JMSF017G16+           CCATTCGTGAAGTGAAAGCATTTCATCTTCTCTCAGGGCAATTCTCTTCAAGAAAACATG
JMSF038I02+           CCATTCGTGAAGTGAAAGCATTTCATCTTCTCTCAGGGCAATTCTCTTCAAGAAAACATG
JMSF031J01+           CCATTCGTGAAGTGAAAGCATTTCATCTTCTCTCAGGGCAATTCTCTTCAAGAAAACATG
                      ____________________________________________________________
consensus             CCATTCGTGAAGTGAAAGCATTTCATCTTCTCTCAGGGCAATTCTCTTCAAGAAAACATG
 
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rJMSF017G16-          GAATCTGAAGTGTACACCGTTTGGATGTCTGAATGTCG                      
JMFN009N13+           GAATCTGAAGTGTACACCGTTTGGATGTCTGAATGTCGGAAAGGTAGGATATAGACTATA
JMSF017G16+           GAATCTGAAGTGTACACCGTTTGGATGTCTGAATGTCGGAAAGGTAGGATATAGACTATA
JMSF038I02+           GAATCTGAAGTGTACACCGTTTGGATGTCTGAATGTCGGAAAGGTAGGAT          
JMSF031J01+           GAATCTGAAGTGTACACCGTTTGGATGTCTGAATGTCGGAAAGGTAGGATATAGACTATA
                      ____________________________________________________________
consensus             GAATCTGAAGTGTACACCGTTTGGATGTCTGAATGTCGGAAAGGTAGGATATAGACTATA
 
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JMFN009N13+           GAGTTGCTGTCTGTCTAGATAGATAGATAGATAGA                         
JMSF017G16+           GAGTTGCTGTCTGTCTAGATAGATAGATAGATAGATACAGACTCAACAACTGAACAT   
JMSF031J01+           GAGTTGCTGTCTGTCTAGATAGATAGATAGATAGATACAGACTCAACAACTGAACATGCC
                      ____________________________________________________________
consensus             GAGTTGCTGTCTGTCTAGATAGATAGATAGATAGATACAGACTCAACAACTGAACATGCC