| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF029O12 | Sequence | 664 | 010754 (3) | ref|XP_008457162.1| | 57.0 | PREDICTED: uncharacterized protein LOC103496903 [Cucumis melo] | 758 | 007511 (4) | ref|XP_011085673.1| | 255 | PREDICTED: uncharacterized protein LOC105167598 [Sesamum indicum] |
| JMSF045M24 | Sequence | 719 | 010754 (3) | ref|XP_009593571.1| | 59.3 | PREDICTED: uncharacterized protein LOC104090224 [Nicotiana tomentosiformis] | 667 | 007511 (4) | ref|XP_011085673.1| | 203 | PREDICTED: uncharacterized protein LOC105167598 [Sesamum indicum] |
| JMSF047H06 | Sequence | 649 | 010754 (3) | ref|XP_008457162.1| | 56.6 | PREDICTED: uncharacterized protein LOC103496903 [Cucumis melo] | 779 | 007511 (4) | emb|CDP09399.1| | 4e-90 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF045M24+ CGATGG
____________________________________________________________
consensus CGATGG
. : . : . : . : . : . :
JMSF045M24+ AGCTGGAAGAAGAATTGGAAGGGTTATTGGAGGAGACCCCCAAAAGGGGTCTCTTATGAG
JMSF029O12+ TGAG
____________________________________________________________
consensus AGCTGGAAGAAGAATTGGAAGGGTTATTGGAGGAGACCCCCAAAAGGGGTCTCTTATGAG
. : . : . : . : . : . :
JMSF045M24+ GGGTGGTCTTGCTATTTGGCACCACCATCGGCGGGGCAGCGGTGGGAGAAGGCGGAATCG
JMSF047H06+ CTATTNGGCACCACCATCGGCGGGGCAGCGGTGGGAGAAGGCGGAATCG
JMSF029O12+ GGGTGGTCTTGCTATTTGGCACCACCATCGGCGGGGCAGCGGTGGGAGAAGGCGGAATCG
____________________________________________________________
consensus GGGTGGTCTTGCTATTTGGCACCACCATCGGCGGGGCAGCGGTGGGAGAAGGCGGAATCG
. : . : . : . : . : . :
JMSF045M24+ AGTCATAGCCATCGTTGATGAAGATTTGAAGGGTTGTATTGTGCGGGGAAGCAGCAGAGG
JMSF047H06+ AGTCATAGCCATCGTTGATGAAGATTTGAAGGGTTGTATTGTGCGGGGAAGCAGCAGAGG
JMSF029O12+ AGTCATAGCCATCGTTGATGAAGATTTGAAGGGTTGTATTGTGCGGGGAAGCAGCAGAGG
____________________________________________________________
consensus AGTCATAGCCATCGTTGATGAAGATTTGAAGGGTTGTATTGTGCGGGGAAGCAGCAGAGG
. : . : . : . : . : . :
JMSF045M24+ GAGAAGGCGGAGGCGGAGAAGGAGGCGCCGCAAAGAAGAAAGCGTTGGGGGCGAGATGGG
JMSF047H06+ GAGAAGGCGGAGGCGGAGAAGGAGGCGCCGCAAAGAAGAAAGCGTTGGGGGCGAGATGGG
JMSF029O12+ GAGAAGGCGGAGGCGGAGAAGGAGGCGCCGCAAAGAAGAAAGCGTTGGGGGCGAGATGGG
____________________________________________________________
consensus GAGAAGGCGGAGGCGGAGAAGGAGGCGCCGCAAAGAAGAAAGCGTTGGGGGCGAGATGGG
. : . : . : . : . : . :
JMSF045M24+ GATTATTGTGTTTCTGGTAAAGCGAAGAAGACGAAGAAAGCAGGGTAGGGTTGAAATCGG
JMSF047H06+ GATTATTGTGTTTCTGGTAAAGCGAAGAAGACGAAGAAAGCAGGGTAGGGTTGAAATCGG
JMSF029O12+ GATTATTGTGTTTCTGGTAAAGCGAAGAAGACGAAGAAAGCAGGGTAGGGTTGAAATCGG
____________________________________________________________
consensus GATTATTGTGTTTCTGGTAAAGCGAAGAAGACGAAGAAAGCAGGGTAGGGTTGAAATCGG
. : . : . : . : . : . :
JMSF045M24+ AAGAGACGCCGCTGCTTTCTTTTCCGATCTGAACTTCAGATTTCTTCTGATGCATTACCT
JMSF047H06+ AAGAGACGCCGCTGCTTTCTTTTCCGATCTGAACTTCAGATTTCTTCTGATGCATTACCT
JMSF029O12+ AAGAGACGCCGCTGCTTTCTTTTCCGATCTGAACTTCAGATTTCTTCTGATGCATTACCT
____________________________________________________________
consensus AAGAGACGCCGCTGCTTTCTTTTCCGATCTGAACTTCAGATTTCTTCTGATGCATTACCT
. : . : . : . : . : . :
JMSF045M24+ ATACATGCGGATAAAGATACATCCACGCTCACTCGTTCTCTCTCTCCCTTCACCAACAAC
JMSF047H06+ ATACATGCGGATAAAGATACATCCACGCTCACTCGTTCTCTCTCTCCCTTCACCAACAAC
JMSF029O12+ ATACATGCGGATAAAGATACATCCACGCTCACTCGTTCTCTCTCTCCCTTCACCAACAAC
____________________________________________________________
consensus ATACATGCGGATAAAGATACATCCACGCTCACTCGTTCTCTCTCTCCCTTCACCAACAAC
. : . : . : . : . : . :
JMSF045M24+ AATATATCGCTTTCCCCTGCCAATTCCAGAGCTTATCTCACCGGGGAAACACGAAATTGG
JMSF047H06+ AATATATCGCTTTCCCCTGCCAATTCCAGAGCTTATCTCACCGGGGAAACACGAAATTGG
JMSF029O12+ AATATATCGCTTTCCCCTGCCAATTCCAGAGCTTATCTCACCGGGGAAACACGAAATTGG
____________________________________________________________
consensus AATATATCGCTTTCCCCTGCCAATTCCAGAGCTTATCTCACCGGGGAAACACGAAATTGG
. : . : . : . : . : . :
JMSF045M24+ GTGGAAATTTCCCACTTTTCTTGAAATGGAATGATTCTCAATTCGCTCTTCTTCCCTTTC
JMSF047H06+ GTGGAAATTTCCCACTTTTCTTGAAATGGAATGATTCTCAATTCGCTCTTCTTCCCTTTC
JMSF029O12+ GTGGAAATTTCCCACTTTTCTTGAAATGGAATGATTCTCAATTCGCTCTTCTTCCCTTTC
____________________________________________________________
consensus GTGGAAATTTCCCACTTTTCTTGAAATGGAATGATTCTCAATTCGCTCTTCTTCCCTTTC
. : . : . : . : . : . :
JMSF045M24+ TCAACCTGTATGGATGGAATTCTACAAACGGAATCTGTGCACAACAATATATATATATAT
JMSF047H06+ TCAACCNGTATGGATGGAATTCTACAAACGGAATCTGTGCACAACAATATATATATATAT
JMSF029O12+ TCAACCTGTATGGATGGAATTCTACAAACGGAATCTGTGCACAACAATATATATATATAT
____________________________________________________________
consensus TCAACCTGTATGGATGGAATTCTACAAACGGAATCTGTGCACAACAATATATATATATAT
. : . : . : . : . : . :
JMSF045M24+ ATATAGTTGTGAGTGTAAAAGAGATTTTGTGTTATGGAGAAGAGAGCGGAGAGAGCAAGA
JMSF047H06+ ATATAGTTGTGAGTGTAAAAGAGATTTTGTGTTATGGAGAAGAGAGCGGAGAGAGCAAGA
JMSF029O12+ ATATAGTTGTGAGTGTAAAAGAGATTTTGTGTTATGGAGAAGAGAGCGGAGAGAGCAAGA
____________________________________________________________
consensus ATATAGTTGTGAGTGTAAAAGAGATTTTGTGTTATGGAGAAGAGAGCGGAGAGAGCAAGA
. : . : . : . : . : . :
JMSF045M24+ AGATTAAGGTATTTTAATGGTGTGTTTTACACCGAGTCTGTAGAAGAAGGA
JMSF047H06+ AGATTAAGGTATTTTAATGGTGTGTTTTACACCGAGTCTGTAGAAGAAGGA
JMSF029O12+ AGATTAAGGTATTTTAATGGTGTGTTTTACACCGAGTCTGTAGAAGAAGGATGGATTTCC
____________________________________________________________
consensus AGATTAAGGTATTTTAATGGTGTGTTTTACACCGAGTCTGTAGAAGAAGGATGGATTTCC