Contig 010752:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS138E10Sequence634010752 (5)ref|XP_009772309.1|3e-61PREDICTED: glutamate receptor 3.6-like, partial [Nicotiana sylvestris]
JMSF013P22Sequence322010752 (5)697005644 (4)ref|XP_010316485.1|6e-91PREDICTED: glutamate receptor 3.6 isoform X3 [Solanum lycopersicum]
JMSF029N09Sequence414010752 (5)ref|XP_009772309.1|3e-07PREDICTED: glutamate receptor 3.6-like, partial [Nicotiana sylvestris]715005644 (4)ref|XP_009796243.1|2e-96PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 3.3-like, partial [Nicotiana
JMSF032G09Sequence664010752 (5)ref|XP_009772309.1|1e-75PREDICTED: glutamate receptor 3.6-like, partial [Nicotiana sylvestris]744005644 (4)ref|XP_009796243.1|6e-98PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 3.3-like, partial [Nicotiana
JMSF046F11Sequence199010752 (5)176005644 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF032G09+ ATGGCAACCACTTCCCTCCACTNGTAGTAGTCCACGATCGACGC
                      ____________________________________________________________
consensus ATGGCAACCACTTCCCTCCACTNGTAGTAGTCCACGATCGACGC
 
. : . : . : . : . : . :
JMSF032G09+ CACTGCAGCCATNTGAAACAAATCGTTCGGGGAGGTCCTAACGAAGAACGGATACTGAAG
JMFS138E10+ AGGTCCTAACGAAGAACGGATACTGAAG
                      ____________________________________________________________
consensus CACTGCAGCCATNTGAAACAAATCGTTCGGGGAGGTCCTAACGAAGAACGGATACTGAAG
 
. : . : . : . : . : . :
JMSF032G09+ AGACGAAAGCGTTGGATCAGTCGCAGCAAAAGACAACAAAGGGACTTGTAGCTCGTTTGC
JMFS138E10+ AGACGAAAGCGTTGGATCAGTCGCAGCAAAAGACAACAAAGGGACTTGTAGCTCGTTTGC
                      ____________________________________________________________
consensus AGACGAAAGCGTTGGATCAGTCGCAGCAAAAGACAACAAAGGGACTTGTAGCTCGTTTGC
 
. : . : . : . : . : . :
JMSF032G09+ AAGGTGGGAAATCACGTGAGCTATGACTGAAGCTTGGGGACCGATTATAGCCACCGTGTC
JMFS138E10+ AAGGTGGGAAATCACGTGAGCTATGACTGAAGCTTGGGGACCGATTATAGCCACCGTGTC
                      ____________________________________________________________
consensus AAGGTGGGAAATCACGTGAGCTATGACTGAAGCTTGGGGACCGATTATAGCCACCGTGTC
 
. : . : . : . : . : . :
JMSF032G09+ GGTCTCCATGAACCGCATAGCTTCAACAATGCCGAGAAATCCACTAGAATTGCTGTCGAG
JMFS138E10+ GGTCTCCATGAACCGCATAGCTTCAACAATGCCGAGAAATCCACTAGAATTGCTGTCGAG
                      ____________________________________________________________
consensus GGTCTCCATGAACCGCATAGCTTCAACAATGCCGAGAAATCCACTAGAATTGCTGTCGAG
 
. : . : . : . : . : . :
JMSF032G09+ CATCGTGACATTCAACTTGGTTCCTCCAAGAACATCTGGATTGGAGTTCACATCATCCAC
JMFS138E10+ CATCGTGACATTCAACTTGGTTCCCCCAAGAACATCTGGATTGGAGTTCACATCATCCAC
                      ____________________________________________________________
consensus CATCGTGACATTCAACTTGGTTCCTCCAAGAACATCTGGATTGGAGTTCACATCATCCAC
 
. : . : . : . : . : . :
JMSF032G09+ TGCAGCTTCCACAGCAGCTTTCGCAACTTTGCCAATTGGCGAAATAAAAGTCAGTATACA
JMFS138E10+ TGCAGCTTCCACAGCAGCTTTCGCAACTTTGCCAATTGGCGAAATAAAAGTCAGTATACA
JMSF029N09+ CTTCNACAGCAGCTTTNGCAANTTNGCCAATNGGNGAAATAAAAGTCAGTATACA
                      ____________________________________________________________
consensus TGCAGCTTCCACAGCAGCTTTCGCAACTTTGCCAATTGGCGAAATAAAAGTCAGTATACA
 
. : . : . : . : . : . :
JMSF032G09+ CCCAATATTCACCACATCAGGCCTGGTAGAAAGGGTTGAATTAACCCCTTCACAAACATA
JMFS138E10+ CCCAATATTCACCACATCAGGCCTGGTAGAAAGGGTTGAATTAACCCCTTCACAAACATA
JMSF013P22+ TGGTAGAAAGGGTTGAATTAACCCCTTCACAAACATA
JMSF029N09+ CCCAATATTCACCACATCAGGCGTGGTAGAAAGGGTTGAATTAACCCCTTCACAAACATA
                      ____________________________________________________________
consensus CCCAATATTCACCACATCAGGCCTGGTAGAAAGGGTTGAATTAACCCCTTCACAAACATA
 
. : . : . : . : . : . :
JMSF032G09+ CCCACTGTAAAAAGTTAAAAACATCACCA-CCCAAAACCCCTTCATCTTCAATTCAATCA
JMSF046F11+ CTGTAAAAAGTTAAAAACATCNCCA-CCCAAAACCCCTTCATCTTCAATTCAATCA
JMFS138E10+ CCCACTGTAAAAAGTTAAAAACATCACCA-CCCAAAACCCCTTCATCTTCAATTCAATCA
JMSF013P22+ CCCACTGTAAAAAGTTAAAAACATCACCA-CCCAAAACCCCTTCATCTTCAATTCAATCA
JMSF029N09+ CCCACTGTAAAAAGTTAAAAACATCACCACCCCAAAACCCCTTCATCTTCAATTCAATCA
                      ____________________________________________________________
consensus CCCACTGTAAAAAGTTAAAAACATCACCA-CCCAAAACCCCTTCATCTTCAATTCAATCA
 
. : . : . : . : . : . :
JMSF032G09+ CCAAACCCCCAGATTTCACCCTGAAAGCAAGCTTTCATTTAATGAA-CAGTGGAAGTGGT
JMSF046F11+ CCAAACCCCCAGATTTCACCTTGAAAGCAAGCTTTCANTTAATGAAGCAGTGGAAGTGGT
JMFS138E10+ CCAAACCCCCAGATTTCACCCTGAAAGCAAGCTTTCATTTAATGAA-CAGTGGAAGTGGT
JMSF013P22+ CCAAACCCCCAGATTTCACCCTGAAAGCAAGCTTTCATTTAATGAA-CAGTGGAAGTGGT
JMSF029N09+ CCAAACCCCCAGATTTCACCCTGAAAGCAAGCTTTCATTTAATGAA-CAGTGGAAGTGGT
                      ____________________________________________________________
consensus CCAAACCCCCAGATTTCACCCTGAAAGCAAGCTTTCATTTAATGAA-CAGTGGAAGTGGT
 
. : . : . : . : . : . :
JMSF032G09+ AAACGTCCTCCATATTTCCTTCTCGTCTTTTTCTGCCCTTCAGTCTTTCTTGGAAATCCA
JMSF046F11+ AAACGTCCTCCATATTTCCTTNTCGTCTTTTTCTGCCNTTCAGTCTTTCTNGGAAATNCA
JMFS138E10+ AAACGTCCTCCATATTTCCTTCTCGTCTTTTTCTGCCCTTCAGTCTTTCTTGGAAATCCA
JMSF013P22+ AAACGTCCTCCATATTTCCTTCTCGTCTTTTTCTGCCCTTCAGTCTTTCTTGGAAATCCA
JMSF029N09+ AAACGTCCTCCATATTTCCTTCTCGTCTTTTTCTGCCCTTCAGTCTTTCTTGGAAATCCA
                      ____________________________________________________________
consensus AAACGTCCTCCATATTTCCTTCTCGTCTTTTTCTGCCCTTCAGTCTTTCTTGGAAATCCA
 
. : . : . : . : . : . :
JMSF032G09+ CTAGATTCATGTATGGCTCAT
JMSF046F11+ CTAGATTCATGNATGGCTCATAT
JMFS138E10+ CTAGATTCATGTATGGCTCATATAGATTGGATTTGGATATACATACATATATATAGCTTG
JMSF013P22+ CTAGATTCATGTATGGCTCATATAGATTGGATTTGGATATACATACATATATATAGCTTG
JMSF029N09+ CTAGATTCATGTATGGCTCATATAGATTGGATTTGGATATACATACATATATATAGCTTG
                      ____________________________________________________________
consensus CTAGATTCATGTATGGCTCATATAGATTGGATTTGGATATACATACATATATATAGCTTG
 
. : . : . : . : . : . :
JMFS138E10+ GAACTTGT
JMSF013P22+ GAACTTGTAAGAGAAGGTATGATACACAAAACTTTTAACAACTC
JMSF029N09+ GAACTTGTAAGAGAAGGTATGATACACAAAACTTTTAACAACTCTGGTAAACATTCCTCC
                      ____________________________________________________________
consensus GAACTTGTAAGAGAAGGTATGATACACAAAACTTTTAACAACTCTGGTAAACATTCCTCC