Contig 010737:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF027H20Sequence329010737 (2)629010737 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF027H20- CAGCATGCATTG
                      ____________________________________________________________
consensus CAGCATGCATTG
 
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rJMSF027H20- TGCATTTGCTTAGCTTCACTGTTCAAGAGAAGAAGAAGAAGAAACATGCTTTCCTGAAAG
                      ____________________________________________________________
consensus TGCATTTGCTTAGCTTCACTGTTCAAGAGAAGAAGAAGAAGAAACATGCTTTCCTGAAAG
 
. : . : . : . : . : . :
rJMSF027H20- GAGAACTAAAGCTTGCACGAACTGCACACACAAGATGGATGGAGGTTCAGGAGAACCTAG
                      ____________________________________________________________
consensus GAGAACTAAAGCTTGCACGAACTGCACACACAAGATGGATGGAGGTTCAGGAGAACCTAG
 
. : . : . : . : . : . :
rJMSF027H20- CTACACCCTTGCAGTGTGCCAGATCAGAGTACCTTTATACCTATCCGCAATTCTATCATT
                      ____________________________________________________________
consensus CTACACCCTTGCAGTGTGCCAGATCAGAGTACCTTTATACCTATCCGCAATTCTATCATT
 
. : . : . : . : . : . :
rJMSF027H20- TGGATCAAATTCTGATTATATTTACACAGAAATTATATATATATATAATCCACAATAATG
                      ____________________________________________________________
consensus TGGATCAAATTCTGATTATATTTACACAGAAATTATATATATATATAATCCACAATAATG
 
. : . : . : . : . : . :
rJMSF027H20- ACATTTGAGATACCTGACACAGTAAAACTTTACTATTTCCTTCCACGTTTTGACTCCATT
                      ____________________________________________________________
consensus ACATTTGAGATACCTGACACAGTAAAACTTTACTATTTCCTTCCACGTTTTGACTCCATT
 
. : . : . : . : . : . :
rJMSF027H20- AAGTAAGTCTGTATGAAACTGTTTCTTTACTTTCTTATACCCAGTTTTAAAACATAATAA
                      ____________________________________________________________
consensus AAGTAAGTCTGTATGAAACTGTTTCTTTACTTTCTTATACCCAGTTTTAAAACATAATAA
 
. : . : . : . : . : . :
rJMSF027H20- TTCTTCAACTTAGTTTTGAATAATCCTAAATTGCTTTTGTAAATGTTAAACATTTTACAA
                      ____________________________________________________________
consensus TTCTTCAACTTAGTTTTGAATAATCCTAAATTGCTTTTGTAAATGTTAAACATTTTACAA
 
. : . : . : . : . : . :
rJMSF027H20- AATATAAACGTAAACAGAAAACAGTTTTATACGAAGCATAAAAACTGAATTAAACCCTAA
JMSF027H20+ CGAAGCNTAAAAACTGAATTNAACCCTAA
                      ____________________________________________________________
consensus AATATAAACGTAAACAGAAAACAGTTTTATACGAAGCATAAAAACTGAATTAAACCCTAA
 
. : . : . : . : . : . :
rJMSF027H20- AGATGACTAAAAAATGCATATAAACAGAAAATACATAGCATAGTGTAAAGAAAAAAAAAA
JMSF027H20+ AGATGNCTAAAAAATGCNTNTAAACCGAAAATNCNTAGCNTNGNGTAAAGAAAAAAAAAA
                      ____________________________________________________________
consensus AGATGACTAAAAAATGCATATAAACCGAAAATACATAGCATAGTGTAAAGAAAAAAAAAA
 
. : . : . : . : . : . :
rJMSF027H20- ACACTACNCTTAANCCGCTTAAAATCTATCTATTTAACCAATTTAAGCTTTACTTAACAA
JMSF027H20+ ACACTACTCTTAATCCGCTTAAAATCTATCTATTTAACCAATTTAAGCTTTACTTAACAA
                      ____________________________________________________________
consensus ACACTACTCTTAATCCGCTTAAAATCTATCTATTTAACCAATTTAAGCTTTACTTAACAA
 
. : . : . : . : . : . :
rJMSF027H20- CATTTATTGATTACC
JMSF027H20+ CATTTATTGATTACCTCCTCAAACAGTGGCGGTTGGCGGCGAGGAGGCGCGCGGTTGGCG
                      ____________________________________________________________
consensus CATTTATTGATTACCTCCTCAAACAGTGGCGGTTGGCGGCGAGGAGGCGCGCGGTTGGCG
 
. : . : . : . : . : . :
JMSF027H20+ GCGAGGAGACGACGAGAGCCGGTTGAGCCGCGATGGACGGAGGCGGTAGCTGTGGACGGA
                      ____________________________________________________________
consensus GCGAGGAGACGACGAGAGCCGGTTGAGCCGCGATGGACGGAGGCGGTAGCTGTGGACGGA
 
. : . : . : . : . : . :
JMSF027H20+ GGCCGTGGCGTCAGCGGATGGAGGACTGAGGAGCCGATGTTCGTAGCTGTGTTCGTCGCC
                      ____________________________________________________________
consensus GGCCGTGGCGTCAGCGGATGGAGGACTGAGGAGCCGATGTTCGTAGCTGTGTTCGTCGCC