Contig 010733:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028N17Sequence567010733 (4)emb|CDP18866.1|4e-84unnamed protein product [Coffea canephora]
JMFF050J11Sequence630010733 (4)emb|CDP18866.1|4e-93unnamed protein product [Coffea canephora]546001242 (6)ref|NP_001234868.1|6e-51WD-40 repeat protein [Solanum lycopersicum] gb|AAK52092.1| WD-40 repeat protein
JMSF026H21Sequence654010733 (4)emb|CDP18866.1|1e-102unnamed protein product [Coffea canephora]758001242 (6)ref|XP_010255536.1|2e-117PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Nelumbo nucifera]
JMSF030K19Sequence645010733 (4)emb|CDP18866.1|3e-117unnamed protein product [Coffea canephora]721001242 (6)ref|XP_010255536.1|2e-112PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Nelumbo nucifera]

Alignment

This contig is upended


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JMSF030K19+ GGAAGTAATCCTTGATGCTGCTGCCACTTCAAAGCTTGACCGATCAAAGCCATTA
                      ____________________________________________________________
consensus GGAAGTAATCCTTGATGCTGCTGCCACTTCAAAGCTTGACCGATCAAAGCCATTA
 
. : . : . : . : . : . :
JMSF030K19+ GTCGTGAAGGAGGGACAACAGAAACCTCTGTAGCAAGAGCTTGGCCTATTTGTGCACGCC
JMFF050J11+ GTAGCAAGAGCTTGGCCTATTNGTGCACGCC
JMSF026H21+ AAGGAGGGACAACAGAAACCTCTGTAGCAAGAGCTTGGCCTATTTGTGCACGCC
                      ____________________________________________________________
consensus GTCGTGAAGGAGGGACAACAGAAACCTCTGTAGCAAGAGCTTGGCCTATTTGTGCACGCC
 
. : . : . : . : . : . :
JMSF030K19+ TTTTCTCTTTTGTTGAATCTTGATAAGCCTCATGCGGGTCAAAGTAAGTCCGAACTAATA
JMFF028N17+ CTCATGCGGGTCAAAGTAAGTCCGAACTAATA
JMFF050J11+ TTTCTTCTTTTGTGAATTCTGNATAAGCCTCATGCGGGTCAAAGTAAGTCCGAACTAATA
JMSF026H21+ TTTTCTCTTTTGTTGAATCTTGATAAGCCTCATGCGGGTCAAAGTAAGTCCGAACTAATA
                      ____________________________________________________________
consensus TTTTCTCTTTTGTTGAATCTTGATAAGCCTCATGCGGGTCAAAGTAAGTCCGAACTAATA
 
. : . : . : . : . : . :
JMSF030K19+ GATGCTCAAGTCGTAGATATCTCTCTGGTTGTTCCTGCTTCATGACACCCATCACTTGTG
JMFF028N17+ GATGCTCAAGTCGTAGATATCTCTCTGGTTGTTCCTGCTTCATGACACCCATCACTTGTG
JMFF050J11+ GATGCTCAAGTCGTAGATATCTCTCTGGTTGTTCCTGCTTCATGACACCCATCACTTGTG
JMSF026H21+ GATGCTCAAGTCGTAGATATCTCTCTGGTTGTTCCTGCTTCATGACACCCATCACTTGTG
                      ____________________________________________________________
consensus GATGCTCAAGTCGTAGATATCTCTCTGGTTGTTCCTGCTTCATGACACCCATCACTTGTG
 
. : . : . : . : . : . :
JMSF030K19+ TTTGCCTCAAAATAGCACGTGCAGTATCTATCTCCCGGAGTTCTATCATTTCTAAAACAA
JMFF028N17+ TTTGCCTCAAAATAGCACGTGCAGTATCTATCTCCCGGAGTTCTATCATTTCTAAAACAA
JMFF050J11+ TTTGCCTCAAAATAGCACGTGCAGTATCTATCTCCCGGAGTTCTATCATTTCTAAAACAA
JMSF026H21+ TTTGCCTCAAAATAGCACGTGCAGTATCTATCTCCCGGAGTTCTATCATTTCTAAAACAA
                      ____________________________________________________________
consensus TTTGCCTCAAAATAGCACGTGCAGTATCTATCTCCCGGAGTTCTATCATTTCTAAAACAA
 
. : . : . : . : . : . :
JMSF030K19+ TCTGCTCATACAAATCCTCGAGTATTTTTCTAGGAAGCTTGAGCTGTGAGACCTGAGGTA
JMFF028N17+ TCTGCTCATACAAATCCTCGAGTATTTTTCTAGGAAGCTTGAGCTGTGAGACCTGAGGTA
JMFF050J11+ TCTGCTCATACAAATCCTCGAGTATTTTTCTAGGAAGCTTGAGCTGTGAGACCTGAGGTA
JMSF026H21+ TCTGCTCATACAAATCCTCGAGTATTTTTCTAGGAAGCTTGAGCTGTGAGACCTGAGGTA
                      ____________________________________________________________
consensus TCTGCTCATACAAATCCTCGAGTATTTTTCTAGGAAGCTTGAGCTGTGAGACCTGAGGTA
 
. : . : . : . : . : . :
JMSF030K19+ ATACTGCATCCCATCGCCCACCATTAATATCAGCAACAAAAGTTTCAAGGCTACCCACTG
JMFF028N17+ ATACTGCATCCCATCGCCCACCATTAATATCAGCAACAAAAGTTTCAAGGCTATCCACTG
JMFF050J11+ ATACTGCATCCCATCGCCCACCATTAATATCAGCAACAAAAGTTTCAAGGCTATCCACTG
JMSF026H21+ ATACTGCATCCCATCGCCCACCATTAATATCAGCAACAAAAGTTTCAAGGCTATCCACTG
                      ____________________________________________________________
consensus ATACTGCATCCCATCGCCCACCATTAATATCAGCAACAAAAGTTTCAAGGCTATCCACTG
 
. : . : . : . : . : . :
JMSF030K19+ TGTTGAGAGAAACCTGGCACTCATTTTGTAATGTTTGGAAAGTTTGATGCAAAGAATTTT
JMFF028N17+ TGTTGAGAGAAACCTGGCACTCATTTTGTAATGTTTGGAAAGTTTGATGCAAAGAATTTT
JMFF050J11+ TGTTGAGAGAAACCTGGCACTCATTTTGTAATGTTTGGAAAGTTTGATGCAAAGAATTTT
JMSF026H21+ TGTTGAGAGAAACCTGGCACTCATTTTGTAATGTTTGGAAAGTTTGATGCAAAGAATTTT
                      ____________________________________________________________
consensus TGTTGAGAGAAACCTGGCACTCATTTTGTAATGTTTGGAAAGTTTGATGCAAAGAATTTT
 
. : . : . : . : . : . :
JMSF030K19+ CTTTGCAGAATTGAAGAACTATCTTAATTACATCTCGAGCTTCTATTTCAAGGGTGGACG
JMFF028N17+ CTTTGCAGAATTGAAGAACTATCTTAATTACATCTCGAGCTTCTATTTCAAGGGTGGACG
JMFF050J11+ CTTTGCAGAATTGAAGAACTATCTTAATTACATCTCGAGCTTCTATTTCAAGGGTGGACG
JMSF026H21+ CTTTGCAGAATTGAAGAACTATCTTAATTACATCTCGAGCTTCTATTTCAAGGGTGGACG
                      ____________________________________________________________
consensus CTTTGCAGAATTGAAGAACTATCTTAATTACATCTCGAGCTTCTATTTCAAGGGTGGACG
 
. : . : . : . : . : . :
JMSF030K19+ ACATAGTTGAGTGATGGAGAATCGACTTTAACACTAAAACCCTAAATTGCTCTCGTCTTC
JMFF028N17+ ACATAGTTGAGTGATGGAGAATCGACTTTAACACTAAAACCCTAAATTGCTCTCGTCTTC
JMFF050J11+ ACATAGTTGAGTGATGGAGAATCGACTTTAACACTAAAACCCTAAATTGCTCTCGTCTTC
JMSF026H21+ ACATAGTTGAGTGATGGAGAATCGACTTTAACACTAAAACCCTAAATTGCTCTCGTCTTC
                      ____________________________________________________________
consensus ACATAGTTGAGTGATGGAGAATCGACTTTAACACTAAAACCCTAAATTGCTCTCGTCTTC
 
. : . : . : . : . : . :
JMSF030K19+ TTCAACGAAACAGATTTTAACTGAGTAAGAGTAATCAATTCTTCGATA
JMFF028N17+ TTCAACGAAACAGATTTTAACTGAGTAAGAGTAATCAATTCTTCGATACGGGTTTGGCAT
JMFF050J11+ TTCAACGAAACAGATTTTAACTGAGTAAGAGTAATCAATTCTTCGATACGGGTTTGGCAT
JMSF026H21+ TTCAACGAAACAGATTTTAACTGAGTAAGAGTAATCAATTCTTCGATACGGGTTTGGCAT
                      ____________________________________________________________
consensus TTCAACGAAACAGATTTTAACTGAGTAAGAGTAATCAATTCTTCGATACGGGTTTGGCAT
 
. : . : . : . : . : . :
JMFF028N17+ TCGGTTCGGGTTAGTATTCTAGCTGGGGCGCACCAAGTACCAACATCAGATTCCC
JMFF050J11+ TCGGTTCGGGTTAGTATTCTAGCTGGGGCGCACCAAGTACCAACATCAGATTCCC
JMSF026H21+ TCGGTTCGGGTTAGTATTCTAGCTGGGGCGCACCAAGTACCAACATCAGATTCCCGTTTC
                      ____________________________________________________________
consensus TCGGTTCGGGTTAGTATTCTAGCTGGGGCGCACCAAGTACCAACATCAGATTCCCGTTTC