Contig 010732:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+                                                    CACAGGCTTAGGAGGTGAA
JMSF026H11+                                                                 GGTGAA
                      ____________________________________________________________
consensus                                                      CACAGGCTTAGGAGGTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           AAAGCTTTCTTTCTCTCAGCTAGCGTGAACTTGGCATGAACAACTTTTCCATCAATCTGG
JMSF026H11+           AAAGCTTTCTTTCTCTCAGCTAGCGTGAACTTGGCATGAACAACTTTTCCATCAATCTGG
                      ____________________________________________________________
consensus             AAAGCTTTCTTTCTCTCAGCTAGCGTGAACTTGGCATGAACAACTTTTCCATCAATCTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           GCTCCATCCATGTAAAGTAAGGCTTTCTCAGCTTCAGGTCTATTCTTGAACTCAACATAT
JMSF026H11+           GCTCCATCCATGTAAAGTAAGGCTTTCTCAGCTTCAGGTCTATTCTTGAACTCAACATAT
                      ____________________________________________________________
consensus             GCTCCATCCATGTAAAGTAAGGCTTTCTCAGCTTCAGGTCTATTCTTGAACTCAACATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           GCATATCCTTTAGGAAGGTTAACTTCACGATCAATTACCAGCTGCACGCGCACAACTTCA
JMSF019E18+                                  TTCACGATCAATTACCAGCTGCACGCGCACAACTTCA
JMSF026H11+           GCATATCCTTTAGGAAGGTTAACTTCACGATCAATTACCAGCTGCACGCGCACAACTTCA
                      ____________________________________________________________
consensus             GCATATCCTTTAGGAAGGTTAACTTCACGATCAATTACCAGCTGCACGCGCACAACTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           CCAAAGTTACCAAATATTTCTTTCAAATGGTTTTCATTGACATTCCTACTAAGGTGCTCC
JMSF019E18+           CCAAAGTTACCAAATATTTCTTTCAAATGGTTTTCATTGACATTCCTACTAAGGTGCTCC
JMSF026H11+           CCAAAGTTACCAAATATTTCTTTCAAATGGTTTTCATTGACATTCCTACTAAGGTGCTCC
                      ____________________________________________________________
consensus             CCAAAGTTACCAAATATTTCTTTCAAATGGTTTTCATTGACATTCCTACTAAGGTGCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           ACGTGTAGCACAAGAGACTCCGGAATAGGAGAAACTTTCCTTGGAGGTGGAGAAGCTTTT
JMSF019E18+           ACGTGTAGCACAAGAGACTCCGGAATAGGAGAAACTTTCCTTGGAGGTGGAGAAGCTTTT
JMSF026H11+           ACGTGTAGCACAAGAGACTCCGGAATAGGAGAAACTTTCCTTGGAGGTGGAGAAGCTTTT
                      ____________________________________________________________
consensus             ACGTGTAGCACAAGAGACTCCGGAATAGGAGAAACTTTCCTTGGAGGTGGAGAAGCTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           TTTGGCTGTGCTGCTGGTGAACGACCTCGCTTTGATCCTTCAGCAGGACTTTTTCTCCGA
JMSF019E18+           TTTGGCTGTGCTGCTGGTGAACGACCTCGCTTTGATCCTTCAGCAGGACTTTTTCTCCGA
JMSF026H11+           TTTGGCTGTGCTGCTGGTGAACGACCTCGCTTTGATCCTTCAGCAGGACTTTTTCTCCGA
                      ____________________________________________________________
consensus             TTTGGCTGTGCTGCTGGTGAACGACCTCGCTTTGATCCTTCAGCAGGACTTTTTCTCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           GGTGGGCTCGGGCTGCGCGAACTACCGCTGCGAGAATGAGAGGAAGAGGAAGAGTAGGAC
JMSF019E18+           GGTGGGCTCGGGCTGCGCGAACTACCGCTGCGAGAATGAGAGGAAGAGGAAGAGTAGGAC
JMSF026H11+           GGTGGGCTCGGGCTGCGCGAACTACCGCTGCGAGAATGAGAGGAAGAGGAAGAGTAGGAC
                      ____________________________________________________________
consensus             GGTGGGCTCGGGCTGCGCGAACTACCGCTGCGAGAATGAGAGGAAGAGGAAGAGTAGGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           CTAGAGCGAGATCGAGAGTGAGAACTGGACCGAGAACCGGAGCCGGAGTAAGAACGAGAC
JMSF019E18+           CTAGAGCGAGATCGAGAGTGAGAACTGGACCGAGAACCGGAGCCGGAGTAAGAACGAGAC
JMSF026H11+           CTAGAGCGAGATCGAGAGTGAGAACTGGACCGAGAACCGGAGCCGGAGTAAGAACGAGAC
                      ____________________________________________________________
consensus             CTAGAGCGAGATCGAGAGTGAGAACTGGACCGAGAACCGGAGCCGGAGTAAGAACGAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           CTTGACGGTGAGCGAGAACGAGAACGCGACCGCGAGGGAGAGCGAGAAGAACCGGAAGGT
JMSF019E18+           CTTGACGGTGAGCGAGAACGAGAACGCGACCGCGAGGGAGAGCGAGAAGAACCGGAAGGT
JMSF026H11+           CTTGACGGTGAGCGAGAACGAGAACGCGACCGCGAGGGAGAGCGAGAAGAACCGGAAGGT
                      ____________________________________________________________
consensus             CTTGACGGTGAGCGAGAACGAGAACGCGACCGCGAGGGAGAGCGAGAAGAACCGGAAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           GACGCCGGACGGCCTCGGCCTGGTTTAGCCATGGCTGGCGCTCGCGGTTGTTCACTAGTC
JMSF019E18+           GACGCCGGACGGCCTCGGCCTGGTTTAGCCATGGCTGGCGCTCGCGGTTGTTCACTAGTC
JMSF026H11+           GACGCCGGACGGCCTCGGCCTGGTTTAGCCATGGCTGGCGCTCGCGGTTGTTCACTAGTC
                      ____________________________________________________________
consensus             GACGCCGGACGGCCTCGGCCTGGTTTAGCCATGGCTGGCGCTCGCGGTTGTTCACTAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028I12+           AGTGATTCACACTGCTTAGTTAAACCCTAGCTCTGAGAGGGTGAAGAGAGGCGAAGCGCC
JMSF019E18+           AGTGATTCACACTGCTTAGTTAAACCCTAGCTCT                          
JMSF026H11+           AGTGATTCACACTGCTTAGTTAAACCCTAGCTCTGAGAGGGTGAAGAGAGGCGAAGCGCC
                      ____________________________________________________________
consensus             AGTGATTCACACTGCTTAGTTAAACCCTAGCTCTGAGAGGGTGAAGAGAGGCGAAGCGCC