| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS048G11 | Sequence | 590 | 010727 (10) | ref|XP_010534036.1| | 1e-20 | PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya | |||||
| JMFS056C10 | Sequence | 623 | 010727 (10) | ref|XP_010534036.1| | 6e-29 | PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya | |||||
| JMFS056D01 | Sequence | 479 | 010727 (10) | ref|XP_010534036.1| | 4e-08 | PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya | |||||
| JMFS149E07 | Sequence | 553 | 010727 (10) | gb|EYU30343.1| | 4e-36 | hypothetical protein MIMGU_mgv1a0026501mg, partial [Erythranthe guttata] | |||||
| JMSF025L24 | Sequence | 396 | 010727 (10) | 751 | 011400 (6) | ref|XP_009604778.1| | 3e-75 | PREDICTED: cationic amino acid transporter 2, vacuolar-like isoform X1 [Nicotia | |||
| JMSF025M09 | Sequence | 676 | 010727 (10) | ref|XP_010534036.1| | 4e-24 | PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya | 791 | 011400 (6) | ref|XP_009604778.1| | 3e-55 | PREDICTED: cationic amino acid transporter 2, vacuolar-like isoform X1 [Nicotia |
| JMSF029I13 | Sequence | 593 | 010727 (10) | ref|XP_010534036.1| | 1e-09 | PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya | 724 | 011400 (6) | ref|XP_009604778.1| | 9e-61 | PREDICTED: cationic amino acid transporter 2, vacuolar-like isoform X1 [Nicotia |
| JMSF042H24 | Sequence | 700 | 010727 (10) | emb|CDP17637.1| | 5e-73 | unnamed protein product [Coffea canephora] | 700 | 011400 (6) | gb|AAN77151.1| | 9e-45 | fiber protein Fb12 [Gossypium barbadense] |
| JMSF050J01 | Sequence | 619 | 010727 (10) | ref|XP_011069954.1| | 1e-24 | PREDICTED: cationic amino acid transporter 2, vacuolar isoform X2 [Sesamum indi | 742 | 011400 (6) | emb|CDP17637.1| | 2e-58 | unnamed protein product [Coffea canephora] |
| JMSF052B04 | Sequence | 679 | 010727 (10) | ref|XP_006391600.1| | 1e-70 | hypothetical protein EUTSA_v10023348mg [Eutrema salsugineum] gb|ESQ28886.1| hypo | 804 | 011400 (6) | emb|CDP17637.1| | 3e-60 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF042H24+ ATTCCCACACACAAAAGCCCCGT
____________________________________________________________
consensus ATTCCCACACACAAAAGCCCCGT
. : . : . : . : . : . :
JMSF052B04+ TACAATACNAACTAATAATGCTGCACATGGATCCACTACAATGTTAAGCCCGGGGATGGT
JMSF042H24+ TACAATACAAANTAATAATGNTGCACATGGATCCANTACAATGTTAAGCCCGGGGATGGT
____________________________________________________________
consensus TACAATACAAACTAATAATGCTGCACATGGATCCACTACAATGTTAAGCCCGGGGATGGT
. : . : . : . : . : . :
JMSF052B04+ GTGACGAGCTAAAAAGACCGGGAGACTGTCTTGTCCTCCAAAGAGCAAGGCCAGGTTTGG
JMSF042H24+ GTGACGAGNTAAAAAGACCGGGAGACTGTCTTGTCCTCCAAAGAGCAAGGCCAGGTTTGG
____________________________________________________________
consensus GTGACGAGCTAAAAAGACCGGGAGACTGTCTTGTCCTCCAAAGAGCAAGGCCAGGTTTGG
. : . : . : . : . : . :
JMSF052B04+ AGATATGCCCCGTGCCACTGCAGAACCTCCAATTGTGTATTCCAATATCAGCCCCCACCC
JMSF042H24+ AGATATGCCCCGTGCCACTGCAGAACCTCCAATTGTGTATTCCAATATCAGCCCCCACCC
JMFS149E07+ ATCAGCCCCCACCC
____________________________________________________________
consensus AGATATGCCCCGTGCCACTGCAGAACCTCCAATTGTGTATTCCAATATCAGCCCCCACCC
. : . : . : . : . : . :
JMSF052B04+ AATTAACCAAGCAACTCCTTCTCCGACGCATATGTAAGAATAATGATATGCACTCCCAGC
JMSF042H24+ AATTAACCAAGCAACTCCTTCTCCGACGCATATGTAAGAATAATGATATGCACTCCCAGC
JMFS149E07+ AATTAACCAAGCAACTCCTTCTCCGACGCATATGTAAGAATAATGATATGCACTCCCAGC
JMFS048G11+ CCAGC
JMFS056C10+ CCGACGCATATGTAAGAATAATGATATGCACTCCCAGC
JMSF050J01+ GATATGCACTCCCAGC
JMSF025M09+ ATGATATGCACTCCCAGC
____________________________________________________________
consensus AATTAACCAAGCAACTCCTTCTCCGACGCATATGTAAGAATAATGATATGCACTCCCAGC
. : . : . : . : . : . :
JMSF052B04+ CGAGGGACAACGACTGGAAAGCTCGGCATAGCAGAGGGCGGAAAGAGCAGCTGCTAT-CC
JMSF042H24+ CGAGGGACAACGACTGGAAAGCTCGGCATAGCAGAGGGCGGAAAGAGCAGCTGCTAT-CC
JMFS149E07+ CGAGGGACAACGACTGGAAAGCTCGGCATAGCAGAGGGCGGAAAGAGCAGCTGCTAT-CC
JMFS048G11+ CGAGGGACAACGACTGGAAAGCTCGGCATAGCAGAGGGCGGAAAGAGCAGCTGCTAT-CC
JMFS056C10+ CGAGGGACAACGACTGGAAAGCTCGGCATAGCAGAGGGCGGAAAGAGCAGCTGCTAT-CC
JMSF050J01+ CGAGGGACAACGACTGGAAAGCTCGGCATAGCAGAGGGCGGAAAGAGCAGCTGCTATCCC
JMSF025M09+ CGAGGGACAACGACTGGAAAGCTCGGCATAGCAGAGGGCGGAAAGAGCAGCTGCTAT-CC
____________________________________________________________
consensus CGAGGGACAACGACTGGAAAGCTCGGCATAGCAGAGGGCGGAAAGAGCAGCTGCTAT-CC
. : . : . : . : . : . :
JMSF052B04+ CCGCTATTAAAAATGAAAAGGCGAGGGCTGGGCCAGAATGCTCTCTCGCAACTGTCCCAA
JMSF042H24+ CCGCTATTAAAAATGAAAAGGCGAGGGCTGGGCCAGAATGCTCTCTCGCAACTGTCCCAA
JMFS149E07+ CCGCTATTAAAAATGAAAAGGCGAGGGCTGGGCCAGAATGCTCTCTCGCAACTGTCCCAA
JMFS048G11+ CCGCTATTAAAAATGAAAAGGCGAGGGCTGGGCCAGAATGCTCTCTCGCAACTGTCCCAA
JMFS056D01+ GCAACTGTCCCAA
JMFS056C10+ CCGCTATTAAAAATGAAAAGGCGAGGGCTGGGCCAGAATGCTCTCTCGCAACTGTCCCAA
JMSF050J01+ CCGCTATTAAAAATGAAAAGGCGAGGGCTGGGCCAGAATGCTCTCTCGCAACTGTCCCAA
JMSF025M09+ CCGCTATTAAAAATGAAAAGGCGAGGGCTGGGCCAGAATGCTCTCTCGCAACTGTCCCAA
____________________________________________________________
consensus CCGCTATTAAAAATGAAAAGGCGAGGGCTGGGCCAGAATGCTCTCTCGCAACTGTCCCAA
. : . : . : . : . : . :
JMSF052B04+ CTAGAATATAAACCCCTGCACCTATAGTTGAACCAACACCTATGGCAATGAGATGAGGGA
JMSF042H24+ CTAGAATATAAACCCCTGCACCTATAGTTGAACCAACACCTATGGCAATGAGATGAGGGA
JMFS149E07+ CTAGAATATAAACCCCTGCACCTATAGTTGAACCAACACCTATGGCAATGAGATGAGGGA
JMFS048G11+ CTAGAATATAAACCCCTGCACCTATAGTTGAACCAACACCTATGGCAATGAGATGAGGGA
JMFS056D01+ CTAGAATATAAACCCCTGCACCTATAGTTGAACCAACACCTATGGCAATGAGATGAGGGA
JMFS056C10+ CTAGAATATAAACCCCTGCACCTATAGTTGAACCAACACCTATGGCAATGAGATGAGGGA
JMSF050J01+ CTAGAATATAAACCCCTGCACCTATAGTTGAACCAACACCTATGGCAATGAGATGAGGGA
JMSF029I13+ ATAGTTGAACCAACACNTATGGCAATGAGATGAGGGA
JMSF025M09+ CTAGAATATAAACCCCTGCACCTATAGTTGAACCAACACCTATGGCAATGAGATGAGGGA
____________________________________________________________
consensus CTAGAATATAAACCCCTGCACCTATAGTTGAACCAACACCTATGGCAATGAGATGAGGGA
. : . : . : . : . : . :
JMSF052B04+ CAGTCAAGGCTTTGGCCAACTGGTGATCTCCACCATGCCCAGAAGCAGAGGATGAAGACT
JMSF042H24+ CAGTCAAGGCTTTGGCCAACTGGTGATCTCCACCATGCCCAGAAGCAGAGGATGAAGACT
JMFS149E07+ CAGTCAAGGCTTTGGCCAACTGGTGATCTCCACCATGCCCAGAAGCAGAGGATGAAGACT
JMFS048G11+ CAGTCAAGGCTTTGGCCAACTGGTGATCTCCACCATGCCCAGAAGCAGAGGATGAAGACT
JMFS056D01+ CAGTCAAGGCTTTGGCCAACTGGTGATCTCCACCATGCCCAGAAGCAGAGGATGAAGACT
JMFS056C10+ CAGTCAAGGCTTTGGCCAACTGGTGATCTCCACCATGCCCAGAAGCAGAGGATGAAGACT
JMSF050J01+ CAGTCAAGGCTTTGGCCAACTGGTGATCTCCACCATGCCCAGAAGCAGAGGATGAAGACT
JMSF029I13+ CAGTCAAGGCTTNGGCCAANTGGTGATNTCCNCCATGCCCAGAAGCAGAGGATGAAGACT
JMSF025M09+ CAGTCAAGGCTTTGGCCAACTGGTGATCTCCACCATGCCCAGAAGCAGAGGATGAAGACT
____________________________________________________________
consensus CAGTCAAGGCTTTGGCCAACTGGTGATCTCCACCATGCCCAGAAGCAGAGGATGAAGACT
. : . : . : . : . : . :
JMSF052B04+ TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
JMSF042H24+ TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
JMFS149E07+ TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
JMFS048G11+ TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
JMFS056D01+ TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
JMFS056C10+ TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
JMSF050J01+ TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
JMSF025L24+ CTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
JMSF029I13+ TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
JMSF025M09+ TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
____________________________________________________________
consensus TTGAATGGGCAGAATCAACCTTCTTCCTCCTCACAAGGCATCTCAACCCACCAGAAAATC
. : . : . : . : . : . :
JMSF052B04+ CA-CCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
JMSF042H24+ CA-CCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
JMFS149E07+ CA-CCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
JMFS048G11+ CA-CCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
JMFS056D01+ CA-CCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
JMFS056C10+ CA-CCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
JMSF050J01+ CA-CCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
JMSF025L24+ CACCCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
JMSF029I13+ CACCCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
JMSF025M09+ CA-CCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAAGAAATCTTCAATTC
____________________________________________________________
consensus CA-CCCCCATCGCCACTCCTTTCCCAATCAGACACAACCCCCATAACAAATCTTCAATTC
. : . : . : . : . : . :
JMSF052B04+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
JMSF042H24+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
JMFS149E07+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
JMFS048G11+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
JMFS056D01+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
JMFS056C10+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
JMSF050J01+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
JMSF025L24+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
JMSF029I13+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
JMSF025M09+ CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
____________________________________________________________
consensus CCAACTTTCCCTATTCACAAAATTTGATCTTTTTTCTAATTTCCCACTCTACTTTTTACA
. : . : . : . : . : . :
JMSF052B04+ ATTTATGTATATGAAAC
JMSF042H24+ ATTTATGTATATGAAACT
JMFS149E07+ ATTTATGTATATGAAACTGTGAAAGTATGTACAAAGTGGGTGCTTTATATCAAATCAATT
JMFS048G11+ ATTTATGTATATGAAACTGTGAAAGTATGTACAAAGTGGGTGCTTTATATCAAATCAATT
JMFS056D01+ ATTTATGTATATGAAACTGTGAAAGTATGTACAAAGTGGGTGCTTTATATCAAATCAATT
JMFS056C10+ ATTTATGTATATGAAACTGTGAAAGTATGTACAAAGTGGGTGCTTTATATCAAATCAATT
JMSF050J01+ ATTTATGTATATGAAACTGTGAAAGTATGTACAAAGTGGGTGCTTTATATCAAATCAATT
JMSF025L24+ ATTTATGTATATGAAACTGTGAAAGTATGTACAAAGTGGGTGCTTTATATCAAATCAATT
JMSF029I13+ ATTTATGTATATGAAACTGTGAAAGTATGTACAAAGTGGGTGCTTTATATCAAATCAATT
JMSF025M09+ ATCTATGTATATGAAACTGTGAAAGTATGTACAAAGTGGGTGCTTTATATCAAATCAATT
____________________________________________________________
consensus ATTTATGTATATGAAACTGTGAAAGTATGTACAAAGTGGGTGCTTTATATCAAATCAATT
. : . : . : . : . : . :
JMFS149E07+ A
JMFS048G11+ ATTCACAAATCACAAGGCTGTATAGTGTATAGTACAAAATCTACAGGAGAAAGTGAGGGA
JMFS056D01+ ATTCACAAATCACAAGGCTGTATAGTGTATAGTACAAAATCTACAGGAGAAAGTGAGGGA
JMFS056C10+ ATTCACAAATCACAAGGCTGTATAGTGTATAGTACAAAATCTACAGGAGAAAGTGAGGGA
JMSF050J01+ ATTCACAAATCACAAGGCTGTATAGTGTATAGTACGAAATCTACAGGAGAAAGTGAGGGA
JMSF025L24+ ATTCACAAATCACAAGGCTGTATAGTGTATAGTACAAAATCTACAGGAGAAAGTGAGGGA
JMSF029I13+ ATTCACAAATCACAAGGCTGTATAGTGTATAGTACAAAATCTACAGGAGAAAGTGAGGGA
JMSF025M09+ ATTCACAAATCACAAGGCTGTATAGTGTATAGTACAAAATCTACAGGAGAAAGTGAGGGA
____________________________________________________________
consensus ATTCACAAATCACAAGGCTGTATAGTGTATAGTACAAAATCTACAGGAGAAAGTGAGGGA
. : . : . : . : . : . :
JMFS048G11+ AGATGGGGGAAGTGAGGTTGAGGTGCCCCTGACAGCAACCCGGGAAG
JMFS056D01+ AGATGGGGGAAGTGAGGTTGAGGTGCCCCTGACAGCAACCCGGGAAG
JMFS056C10+ AGATGGGGGAAGTGAGGTTGAGGTGCCCCTGACAGCAACCCGGGAAG
JMSF050J01+ AGATGGGGGAAGTGAGGTTGAGGTGCCCCTGACAGCAACCCGGGAAGGAGACGGCTGCTG
JMSF025L24+ AGATGGGGGAAGTGAGGTTGAGGTGCCCCTGACAGCAACCCGGGAAGGAGACGGCTGCTG
JMSF029I13+ AGATGGGGGAAGTGAGGTTGAGGTGCCCCTGACAGCAACCCGGGAAGGAGACGGCTGCTG
JMSF025M09+ AGATGGGGGAAGTGAGGTTGAGGTGCCCCTGACAGCAACCCGGGAAGGAGACGGCTGCTG
____________________________________________________________
consensus AGATGGGGGAAGTGAGGTTGAGGTGCCCCTGACAGCAACCCGGGAAGGAGACGGCTGCTG
. : . : . : . : . : . :
JMSF050J01+ A
JMSF025L24+ AACAGGCAGAGATCAACTGCCAAAGATCAAAGATCACGTTTTCAGATACACGATCCTC
JMSF029I13+ AACAGGCAGAGATCAACTGCCAAAGATCAAAGATCACGTTTTCAGATACACGATCCTC
JMSF025M09+ AACAGGCAGAGATCAACTGCCAAAGATCAAAGATCACGTTTTCAGATACACGATCCTCCA
____________________________________________________________
consensus AACAGGCAGAGATCAACTGCCAAAGATCAAAGATCACGTTTTCAGATACACGATCCTCCA