Contig 010724:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019M11Sequence485010724 (4)ref|XP_009803442.1|9e-39PREDICTED: UPF0202 protein At1g10490-like [Nicotiana sylvestris]742009820 (9)emb|CDP12880.1|3e-51unnamed protein product [Coffea canephora]
JMSF025J20Sequence139010724 (4)783009820 (9)ref|XP_002279361.1|7e-96PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera] emb|CBI21526.3| unnamed pr
JMSF039J09Sequence671010724 (4)gb|KDO50463.1|3e-74hypothetical protein CISIN_1g0016721mg, partial [Citrus sinensis] gb|KDO50464.1|870009820 (9)emb|CDP12880.1|9e-67unnamed protein product [Coffea canephora]
JMSF047H05Sequence706010724 (4)gb|KDO50463.1|9e-75hypothetical protein CISIN_1g0016721mg, partial [Citrus sinensis] gb|KDO50464.1|774009820 (9)emb|CDP12880.1|2e-44unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF039J09+ TTCATGAACATCCATAACCATGGTGTACAGACTTGTCAATGAGGACAAGGATCGG
JMSF047H05+ TCTTTCATGAACATCCATAACCATGGTGTACAGACTTGTCAATGAGGACAAGGATCGG
                      ____________________________________________________________
consensus TCTTTCATGAACATCCATAACCATGGTGTACAGACTTGTCAATGAGGACAAGGATCGG
 
. : . : . : . : . : . :
JMSF039J09+ AGCAGTAAAACAATCAAACCACCACCTTCAACTGTTTCTATAGTTCTTGCCAAAAGATTG
JMSF047H05+ AGCAGTAAAACAATCAAACCACCACCTTCAACTGTTTCTATAGTTCTTGCCAAAAGATTG
                      ____________________________________________________________
consensus AGCAGTAAAACAATCAAACCACCACCTTCAACTGTTTCTATAGTTCTTGCCAAAAGATTG
 
. : . : . : . : . : . :
JMSF039J09+ GGTGTCAAAGCCTCAAAATCCTGTAATATGCACATGCCAAAAGTGTTTCCAAGAACTCTT
JMSF047H05+ GGTGTCAAAGCCTCAAAATCCTGTAATATGCACATGCCAAAAGTGTTTCCAAGAACTCTT
                      ____________________________________________________________
consensus GGTGTCAAAGCCTCAAAATCCTGTAATATGCACATGCCAAAAGTGTTTCCAAGAACTCTT
 
. : . : . : . : . : . :
JMSF039J09+ TCTGAATCCTTATACAGGCAATAAGAGACACCACCAGTTTCAACAAATAGTTCAAAAGGA
JMSF019M11+ ACAGGCAATAAGAGACACCACCAGTTTCAACAAATAGTTCAAAAGGA
JMSF047H05+ TCTGAATCCTTATACAGGCAATAAGAGACACCACCAGTTTCAACAAATAGTTCAAAAGGA
                      ____________________________________________________________
consensus TCTGAATCCTTATACAGGCAATAAGAGACACCACCAGTTTCAACAAATAGTTCAAAAGGA
 
. : . : . : . : . : . :
JMSF039J09+ TCTGCTCTCTCAGGATCAAGCAGCCCTCTCTGCATTAATTTTTTTAGTTGCTTCTTCCTT
JMSF019M11+ TCTGCTCTCTCAGGATCAAGCAGCCCTCTCTGCATTAATTTTNTTAGTTGCTTCTTCCTT
JMSF047H05+ TCTGCTCTCTCAGGATCAAGCAGCCCTCTCTGCATTAATTTTTTTAGTTGCTTCTTCCTT
                      ____________________________________________________________
consensus TCTGCTCTCTCAGGATCAAGCAGCCCTCTCTGCATTAATTTTTTTAGTTGCTTCTTCCTT
 
. : . : . : . : . : . :
JMSF039J09+ TTCTTCTTATGGCTGCTAAGTTCAAGCTTGTCCTTGTAGCACCAAAGGACAGTGGGGCGC
JMSF019M11+ TTCTTCTTATGGCTGCTAAGTTCAAGCTTGTCCTNGTAGCACCAAAGGACAGTGGGGCGC
JMSF047H05+ TTCTTCTTATGGCTGCTAAGTTCAAGCTTGTCCTTGTAGCACCAAAGGACAGTGGGGCGC
                      ____________________________________________________________
consensus TTCTTCTTATGGCTGCTAAGTTCAAGCTTGTCCTTGTAGCACCAAAGGACAGTGGGGCGC
 
. : . : . : . : . : . :
JMSF039J09+ GACTTCACTACAGCTTTGCTTACCATGTAGTGCAGGTTCACAATCTGATCGCGAGACTTG
JMSF019M11+ GACTTCACTACAGCTTTGCTTACCATGTAGTGCAGGTTCACAATCTGATCGCGAGACTTG
JMSF047H05+ GACTTCACTACAGCTTTGCTTACCATGTAGTGCAGGTTCACAATCTGATCGCGAGACTTG
                      ____________________________________________________________
consensus GACTTCACTACAGCTTTGCTTACCATGTAGTGCAGGTTCACAATCTGATCGCGAGACTTG
 
. : . : . : . : . : . :
JMSF039J09+ TCACCGATGATGACGAACATGGATCGATGACGGTTTTTGACGCCATTCTCGATGAGGGTT
JMSF019M11+ TCACCGATGATGACGAACATGGATCGATGACGGTTTTNGACGCCATTCTCGATGAGGGTT
JMSF047H05+ TCACCGATGATGACGAACATGGATCGATGACGGTTTTTGACGCCATTCTCGATGAGGGTT
                      ____________________________________________________________
consensus TCACCGATGATGACGAACATGGATCGATGACGGTTTTTGACGCCATTCTCGATGAGGGTT
 
. : . : . : . : . : . :
JMSF039J09+ CTGATGCGCTCGTCCACCTTCTTCCTCATTGTCTCAGGGTTTTGCTTGTCTGGGGACTG
JMSF019M11+ NTGATGCGCTCGTCCACCTTCTTCCTCATTGTCTCAGGGTTTTGCTNGTCTGGGGACTG
JMSF047H05+ CTGATGCGCTCGTCCACCTTCTTCCTCATTGTCTCAGGGTTTTGCTTGTCTGGGGACTGG
                      ____________________________________________________________
consensus CTGATGCGCTCGTCCACCTTCTTCCTCATTGTCTCAGGGTTTTGCTTGTCTGGGGACTGG
 
. : . : . : . : . : . :
JMSF047H05+ GATATATTAAGTGGTGATCAAACAGTAAACCGAAAAACCTGTCGTGGGAAGAGAGACAGG
JMSF025J20+ TCGTGGGAAGAGAGACAGG
                      ____________________________________________________________
consensus GATATATTAAGTGGTGATCAAACAGTAAACCGAAAAACCTGTCGTGGGAAGAGAGACAGG
 
. : . : . : . : . : . :
JMSF047H05+ AGACGAGGGAGAAGTGTCGAGTGAGCGTGAGGCGGTGACCGGAGAACCGTCGTGCGTTAC
JMSF025J20+ AGACGAGGGAGAAGTGTCGAGTGAGCGTGAGGCGGTGACCGGAGAACCGTCGTGCGTTAA
                      ____________________________________________________________
consensus AGACGAGGGAGAAGTGTCGAGTGAGCGTGAGGCGGTGACCGGAGAACCGTCGTGCGTTAC
 
. : . : . : . : . : . :
JMSF047H05+ TGCGCCGTCTGTGGGTTGTGGCTGTGGAATGTTCGAATGCAGAA
JMSF025J20+ TGCNCCGTCTGTGGGTTGTGNCTGTGGAATGTTCGAATGCAGAANCCGAGGGAAATTTCC
                      ____________________________________________________________
consensus TGCGCCGTCTGTGGGTTGTGGCTGTGGAATGTTCGAATGCAGAANCCGAGGGAAATTTCC