Contig 010710:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M06Sequence590010710 (10)ref|XP_004232400.1|8e-87PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho696011127 (9)gb|EYU29487.1|6e-126hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU
JMFF009O15Sequence598010710 (10)ref|XP_004232400.1|5e-83PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho756011127 (9)gb|EYU29487.1|7e-113hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU
JMFF022H02Sequence521010710 (10)ref|XP_009794665.1|5e-58PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho450011127 (9)ref|XP_006573312.1|1e-42PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochond
JMFF033K14Sequence462010710 (10)ref|XP_009794665.1|1e-51PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho
JMFF038I06Sequence549010710 (10)ref|XP_009794665.1|6e-77PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho781011127 (9)gb|EYU29487.1|5e-116hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU
JMFF039L11Sequence586010710 (10)ref|XP_004232400.1|2e-85PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho752011127 (9)gb|EYU29487.1|6e-112hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU
JMFF049B05Sequence633010710 (10)ref|XP_004232400.1|5e-96PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho613011127 (9)gb|EYU29487.1|1e-83hypothetical protein MIMGU_mgv1a0028802mg, partial [Erythranthe guttata] gb|EYU
JMFS162C02Sequence535010710 (10)ref|XP_009794665.1|1e-69PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho
JMSF023N21Sequence599010710 (10)ref|XP_004232400.1|4e-78PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho784011127 (9)ref|XP_011097110.1|4e-174PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase [ubiquinone] flavoprote
JMSF039E23Sequence711010710 (10)ref|XP_004232400.1|3e-117PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitocho856011127 (9)ref|XP_011097110.1|7e-155PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase [ubiquinone] flavoprote

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF039E23+ GAACTGCGTATTATGNTTCATAGCCTGCCCA
                      ____________________________________________________________
consensus GAACTGCGTATTATGNTTCATAGCCTGCCCA
 
. : . : . : . : . : . :
JMFF049B05+ TATGCT
JMSF039E23+ TAGAGAGTATGCAACAAAGCATGTCCAGTCCGATCAGCAGCACAGGCACAGCGGTATGCT
                      ____________________________________________________________
consensus TAGAGAGTATGCAACAAAGCATGTCCAGTCCGATCAGCAGCACAGGCACAGCGGTATGCT
 
. : . : . : . : . : . :
JMFF049B05+ TGTCCGCCTTTTCCAAAATTTAGACTGTGGCCACCAAATGCACGTTGATATATTTTCCCA
JMFF002M06+ CCACCAAATGCACGTTGATATATTTTCCCA
JMFF039L11+ CCAAATGCACGTTGATATATTTTCCCA
JMSF039E23+ TGTCCGCCTTTTCCAAAATTTAGACTTTGGCCACCAAATGCACGTTGATATATTTTCCCA
JMFF009O15+ CGTTGATATATTTTCCCA
                      ____________________________________________________________
consensus TGTCCGCCTTTTCCAAAATTTAGACTTTGGCCACCAAATGCACGTTGATATATTTTCCCA
 
. : . : . : . : . : . :
JMFF049B05+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMFF002M06+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMFF039L11+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMSF039E23+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMFF038I06+ GTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMFS162C02+ TCAAGCTCTATGACTGCTTTTGGAGCT
JMFF009O15+ TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
JMSF023N21+ CTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
                      ____________________________________________________________
consensus TCTTCAGTTCGAGAGAATGGCAGCCCATAGTTCTCAAGCTCTATGACTGCTTTTGGAGCT
 
. : . : . : . : . : . :
JMFF049B05+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF002M06+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF039L11+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF033K14+ TAGCCAATCACTTCCTTTAACAGTA
JMSF039E23+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF038I06+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFS162C02+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF009O15+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMFF022H02+ TGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
JMSF023N21+ TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
                      ____________________________________________________________
consensus TCTCTACACATATACTGAATAGCATCCTGATCACCTAGCCAATCACTTCCTTTAACAGTA
 
. : . : . : . : . : . :
JMFF049B05+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTACTAGTGCAGCATTTATACCA
JMFF002M06+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF039L11+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF033K14+ TCATACATGTGCCACCTCCAATCATCNTCAGTCATATTTACTAGTGCAGCATTTATACCA
JMSF039E23+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF038I06+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFS162C02+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF009O15+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMFF022H02+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
JMSF023N21+ TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
                      ____________________________________________________________
consensus TCATACATGTGCCACCTCCAATCATCCTCAGTCATATTTCCTAGTGCAGCATTTATACCA
 
. : . : . : . : . : . :
JMFF049B05+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF002M06+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF039L11+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF033K14+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMSF039E23+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF038I06+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFS162C02+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF009O15+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMFF022H02+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
JMSF023N21+ CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
                      ____________________________________________________________
consensus CCCTGAGCGGCAACCGTGTGAGAACGAGTTGGAAAGAGCTTGGTAATACAAGCAGTGTTG
 
. : . : . : . : . : . :
JMFF049B05+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF002M06+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF039L11+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF033K14+ AATCCATGCTCAGACAACCCAATTGCTGCTNTAAGCCNTGCACCTCCTGCACCTACCACC
JMSF039E23+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF038I06+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFS162C02+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF009O15+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMFF022H02+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
JMSF023N21+ AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
                      ____________________________________________________________
consensus AATCCATGCTCAGACAACCCAATTGCTGCTCTAAGCCCTGCACCTCCTGCACCTACCACC
 
. : . : . : . : . : . :
JMFF049B05+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF002M06+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF039L11+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF033K14+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMSF039E23+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF038I06+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFS162C02+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF009O15+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMFF022H02+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
JMSF023N21+ ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
                      ____________________________________________________________
consensus ACTGCATCATATGTGTGATCCACTACCGTATAGGATGACCCTCCCACATTAGCTTGAGTA
 
. : . : . : . : . : . :
JMFF049B05+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF002M06+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF039L11+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF033K14+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMSF039E23+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF038I06+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFS162C02+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF009O15+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMFF022H02+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
JMSF023N21+ GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
                      ____________________________________________________________
consensus GAGAAAAGGCGCTGTAAATGGGAGTCGCCGGAGATGGATCTCTTGGAACCAATGCGAAGT
 
. : . : . : . : . : . :
JMFF049B05+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF002M06+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF039L11+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF033K14+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATNGAATATGTATGATTTGTG
JMSF039E23+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF038I06+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFS162C02+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF009O15+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMFF022H02+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
JMSF023N21+ CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
                      ____________________________________________________________
consensus CCACGCGACACGCAGCGCCACATCTCTCACCGATTTCGAATCGAATATGTATGATTTGTG
 
. : . : . : . : . : . :
JMFF049B05+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF002M06+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF039L11+ TCTGCGACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF033K14+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMSF039E23+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF038I06+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFS162C02+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF009O15+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMFF022H02+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
JMSF023N21+ TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
                      ____________________________________________________________
consensus TCTGCAACTGCGACTGGTTTAGCTCAGGAGATCGAATATGCGGGTTGGGAAGACGAAGAA
 
. : . : . : . : . : . :
JMFF049B05+ GAAGAAGAAGAA
JMFF002M06+ GAAGAAGAAGAAGATGTTC
JMFF039L11+ GAAGAAGAAGAAGATGTTC
JMFF033K14+ GAAGAAGAAGAA
JMSF039E23+ GAAGAAGAAGAAGATGTTC
JMFF038I06+ GAAGAAGAAGAAGAT
JMFS162C02+ GAAGAAGAAGAAGATGTTCAAAAGCTAA
JMFF009O15+ GAAGAAGAAGAAGATGTTCAAAAGCTAACGCGACAAATGT
JMFF022H02+ GAAGAAGAAGAAGATGTTCAAAAGCTAACGCGACAAATGTGGAGACTAGAAATACT
JMSF023N21+ GAAGAAGAAGAAGATGTTCAAAAGCTAACGCGACAAATGTGGAGACTAGAAATACTATCC
                      ____________________________________________________________
consensus GAAGAAGAAGAAGATGTTCAAAAGCTAACGCGACAAATGTGGAGACTAGAAATACTATCC