Contig 010685:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047H09Sequence626010685 (5)ref|XP_007014241.1|180Transducin/WD40 repeat-like superfamily protein [Theobroma cacao] gb|EOY31860.1|574013838 (2)ref|XP_009764170.1|1e-14PREDICTED: WD repeat-containing protein 75 [Nicotiana sylvestris]
JMFS019D03Sequence627010685 (5)gb|KCW80988.1|5e-53hypothetical protein EUGRSUZ_C02353 [Eucalyptus grandis]
JMFS055H04Sequence642010685 (5)gb|KCW80988.1|6e-52hypothetical protein EUGRSUZ_C02353 [Eucalyptus grandis]
JMFS126H11Sequence623010685 (5)gb|KDP35363.1|3e-47hypothetical protein JCGZ_10347 [Jatropha curcas]
JMSF022A07Sequence624010685 (5)gb|KCW80988.1|3e-46hypothetical protein EUGRSUZ_C02353 [Eucalyptus grandis]770013838 (2)ref|XP_011095677.1|4e-44PREDICTED: WD repeat-containing protein 75 [Sesamum indicum]

Alignment

This contig is upended


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JMFS019D03+                                              TGTTGAAATGTCCTGAGAAGAAATA
JMFF047H09+                                                             AGAAGAAATA
JMFS055H04+                                                             AGAAGAAATA
                      ____________________________________________________________
consensus                                                TGTTGAAATGTCCTGAGAAGAAATA
 
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JMFS019D03+           TAAGCAAAAACATCCATAGATTTTTCACTGCTCTCCAGTGGTTGACATACTAGTCCTGGA
JMFF047H09+           TAAGCAAAAACATCCATAGATTTTCACTGCTCTCCCAGTGGTGNACATACTAGTCCTGGA
JMFS055H04+           TAAGCAAAAACATCCATAGATTTTTCACTGCTCTCCAGTGGTTGACATACTAGTCCTGGA
JMFS126H11+                                             CCAGTGGTTGACATACTAGTCCTGGA
JMSF022A07+                                               AGTGGTTGACATACTAGTCCTGGA
                      ____________________________________________________________
consensus             TAAGCAAAAACATCCATAGATTTTTCACTGCTCTCCAGTGGTTGACATACTAGTCCTGGA
 
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JMFS019D03+           ATCACCATGGAATGAATTGGGGTCTTAATATTAATAGTCTTCATCAATTCAGCTACTGAA
JMFF047H09+           ATCACCATGGAATGAATTGGGGTCTTAATATTAATAGTCTTCATCAATTCAGCTACTGAA
JMFS055H04+           ATCACCATGGAATGAATTGGGGTCTTAATATTAATAGTCTTCATCAATTCAGCTACTGAA
JMFS126H11+           ATCACCATGGAATGAATTGGGGTCTTAATATTAATAGTCTTCATCAATTCAGCTACTGAA
JMSF022A07+           ATCACCATGGAATGAATTGGGGTCTTAATATTAATAGTCTTCATCAATTCAGCTACTGAA
                      ____________________________________________________________
consensus             ATCACCATGGAATGAATTGGGGTCTTAATATTAATAGTCTTCATCAATTCAGCTACTGAA
 
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JMFS019D03+           AAGTCCCAATATCTAATTGTGCCATCAAGTGATGCTGTCCAACAATAGCACAGTATTTTA
JMFF047H09+           AAGTCCCAATATCTAATTGTGCCATCAAGTGATGCTGTCCAACAATAGCACAGTATTTTA
JMFS055H04+           AAGTCCCAATATCTAATTGTGCCATCAAGTGATGCTGTCCAACAATAGCACAGTATTTTA
JMFS126H11+           AAGTCCCAATATCTAATTGTGCCATCAAGTGATGCTGTCCAACAATAGCACAGTATTTTA
JMSF022A07+           AAGTCCCAATATCTAATTGTGCCATCAAGTGATGCTGTCCAACAATAGCNCAGTATTTTA
                      ____________________________________________________________
consensus             AAGTCCCAATATCTAATTGTGCCATCAAGTGATGCTGTCCAACAATAGCACAGTATTTTA
 
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JMFS019D03+           CTTGCTGGTGTTGTTGCTGGCACTACAATAACTGATGTTACCAGTGCTGTATGACCTTCC
JMFF047H09+           CTTGCTGGTGTTGTTGCTGGCACTACAATAACTGATGTTACCAGTGCTGTATGACCTTCC
JMFS055H04+           CTTGCTGGTGTTGTTGCTGGCACTACAATAACTGATGTTACCAGTGCTGTATGACCTTCC
JMFS126H11+           CTTGCTGGTGTTGTTGCTGGCACTACAATAACTGATGTTACCAGTGCTGTATGACCTTCC
JMSF022A07+           CTTGCTGGTGTTGTTGCTGGCACTACAATAACTGATGTTACCAGTGCTGTATGACCTTCC
                      ____________________________________________________________
consensus             CTTGCTGGTGTTGTTGCTGGCACTACAATAACTGATGTTACCAGTGCTGTATGACCTTCC
 
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JMFS019D03+           AACTCACCTATCTGTAAACCAGTGAAGGTGCTGAAAACAGACACAGTGCTAGCTGTGCAG
JMFF047H09+           AACTCACCTATCTGTAAACCAGTGAAGGTGCTGAAAACAGACACAGTGCTAGCTGTGCAG
JMFS055H04+           AACTCACCTATCTGTAAACCAGTGAAGGTGCTGAAAACAGACACAGTGCTAGCTGTGCAG
JMFS126H11+           AACTCACCTATCTGTAAACCAGTGAAGGTGCTGAAAACAGACACAGTGCTAGCTGTGCAG
JMSF022A07+           AACTCACCTATCTGTAAACCAGNGAAGGTGCTGAAAACAGACACAGTGCTAGCTGTGCAG
                      ____________________________________________________________
consensus             AACTCACCTATCTGTAAACCAGTGAAGGTGCTGAAAACAGACACAGTGCTAGCTGTGCAG
 
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JMFS019D03+           ACAAGGAGCTTCTTCCCATCATTTGAGAATGCCGGTGGTGAAGAAACCAGGCTTCTTCCA
JMFF047H09+           ACAAGGAGCTTCTTCCCATCATTTGAGAATGCCGGTGGTGAAGAAACCAGGCTTCTTCCA
JMFS055H04+           ACAAGGAGCTTCTTCCCATCATTTGAGAATGCCGGTGGTGAAGAAACCAGGCTTCTTCCA
JMFS126H11+           ACAAGGAGCTTCTTCCCATCATTTGAGAATGCCGGTGGTGAAGAAACCAGGCTTCTTCCA
JMSF022A07+           ACAAGGAGCTTNTTCCCATCATTTGAGAATGCCGGTGGNGAAGAAACCAGGCTTNTTCCA
                      ____________________________________________________________
consensus             ACAAGGAGCTTCTTCCCATCATTTGAGAATGCCGGTGGTGAAGAAACCAGGCTTCTTCCA
 
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JMFS019D03+           CCTCTTATCATTTTTTTTTTTACTTTTTCCTCTCTGTTTTTATAATATTCCAGTTGTAGA
JMFF047H09+           CCTCTTATCA-TTTTTTTTTTACTTTTTCCTCTCTGTTTTTATAATATTCCAGTTGTAGA
JMFS055H04+           CCTCTTATCATTTTTTTTTTTACTTTTTCCTCTCTGTTTTTATAATATTCCAGTTGTAGA
JMFS126H11+           CCTCTTATCATTTTTTTTTTTACTTTTTCCTCTCTGTTTTTATAATATTCCAGTTGTAGA
JMSF022A07+           CCTCTTATCATTTTTTTTTTTACTTTTTCCTCTCTGTTTTTATAATATTCCAGTTGTAGA
                      ____________________________________________________________
consensus             CCTCTTATCATTTTTTTTTTTACTTTTTCCTCTCTGTTTTTATAATATTCCAGTTGTAGA
 
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JMFS019D03+           CAGCTGAAATATGGTTATTCTGCACCTCGCCGCCTCGCAGTCGTCGCTGCTGGACTCGTT
JMFF047H09+           CAGCTGAAATATGGTTATTCTGCACCTCGCCGCCTCGCAGTCGTCGCTGCTGGACTCGTT
JMFS055H04+           CAGCTGAAATATGGTTATTCTGCACCTCGCCGCCTCGCAGTCGTCGCTGCTGGACTCGTT
JMFS126H11+           CAGCTGAAATATGGTTATTCTGCACCTCGCCGCCTCGCAGTCGTCGCTGCTGGACTCGTT
JMSF022A07+           CAGCTGAAATATGGTTATTCTGCACCTCGCCGCCTCGCAGTCGTCGCTGCTGGACTCGTT
                      ____________________________________________________________
consensus             CAGCTGAAATATGGTTATTCTGCACCTCGCCGCCTCGCAGTCGTCGCTGCTGGACTCGTT
 
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JMFS019D03+           GTCCTTGTCTCGAGAGTCGACTCTCTCGACTCTCGTTGAATGACTTGAATCGTTGATATT
JMFF047H09+           GTCCTTGTCTCGAGAGTCGACTCTCTCGACTCTCGTTGAATGACTTGAATCGTTGATATT
JMFS055H04+           GTCCTTGTCTCGAGAGTCGACTCTCTCGACTCTCGTTGAATGACTTGAATCGTTGATATT
JMFS126H11+           GTCCTTGTCTCGAGAGTCGACTCTCTCGACTCTCGTTGAATGACTTGAATCGTTGATATT
JMSF022A07+           GTCCTTGTCTCGAGAGTCGACTCTCTCGACTCTCGTTGAATGACTTGAATCGTTGATATT
                      ____________________________________________________________
consensus             GTCCTTGTCTCGAGAGTCGACTCTCTCGACTCTCGTTGAATGACTTGAATCGTTGATATT
 
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JMFS019D03+           AGGTTTTTCCCTTTTTGCTTATTATTCAGTTAATATATCAGAGCTTCTTCTCAACAAGCT
JMFF047H09+           AGGTTTTTCCCTTTTTGCTTATTATTCAGTTAATATATCAGAGCTTCTTCTCAACAAGCT
JMFS055H04+           AGGTTTTTCCCTTTTTGCTTATTATTCAGTTAATATATCAGAGCTTCTTCTCAACAAGCT
JMFS126H11+           AGGTTTTTCCCTTTTTGCTTATTATTCAGTTAATATATCAGAGCTTCTTCTCAACAAGCT
JMSF022A07+           AGGTTTTTCCCTTTTTGCTTATTATTCAGTTAATATATCAGAGCTTCTTCTCAACAAGCT
                      ____________________________________________________________
consensus             AGGTTTTTCCCTTTTTGCTTATTATTCAGTTAATATATCAGAGCTTCTTCTCAACAAGCT
 
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JMFS019D03+           TG                                                          
JMFF047H09+           TGAGGTAAGCGGAAGGT                                           
JMFS055H04+           TGAGGTAAGCGGAAGGTACTGAAACTCAG                               
JMFS126H11+           TGAGGTAAGCGGAAGGTACTGAAACTCAG                               
JMSF022A07+           TGAGGTAAGCGGAAGGTACTGAAACTCAGAGGAGAAGAAGACACCAAGTAACGTTTGTTC
                      ____________________________________________________________
consensus             TGAGGTAAGCGGAAGGTACTGAAACTCAGAGGAGAAGAAGACACCAAGTAACGTTTGTTC