Contig 010681:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043B18Sequence628010681 (8)ref|XP_002270988.3|2e-66PREDICTED: probable threonine--tRNA ligase, cytoplasmic [Vitis vinifera]530001248 (8)gb|EYU43185.1|4e-72hypothetical protein MIMGU_mgv1a002431mg [Erythranthe guttata]
JMFF051C18Sequence555010681 (8)ref|XP_009795256.1|5e-48PREDICTED: probable threonine--tRNA ligase, cytoplasmic [Nicotiana sylvestris]614001248 (8)gb|EYU43185.1|1e-71hypothetical protein MIMGU_mgv1a002431mg [Erythranthe guttata]
JMFF051I16Sequence554010681 (8)ref|XP_009795256.1|3e-49PREDICTED: probable threonine--tRNA ligase, cytoplasmic [Nicotiana sylvestris]532001248 (8)gb|KDO58457.1|3e-56hypothetical protein CISIN_1g0468081mg, partial [Citrus sinensis]
JMFF051K16Sequence555010681 (8)ref|XP_009795256.1|1e-49PREDICTED: probable threonine--tRNA ligase, cytoplasmic [Nicotiana sylvestris]493001248 (8)gb|KDO58457.1|9e-54hypothetical protein CISIN_1g0468081mg, partial [Citrus sinensis]
JMSF002L24Sequence391010681 (8)ref|XP_010112806.1|3e-12Threonine--tRNA ligase [Morus notabilis] gb|EXC34921.1| Threonine--tRNA ligase [748001248 (8)gb|EYU43185.1|1e-141hypothetical protein MIMGU_mgv1a002431mg [Erythranthe guttata]
JMSF009C07Sequence285010681 (8)717001248 (8)ref|XP_009795256.1|3e-126PREDICTED: probable threonine--tRNA ligase, cytoplasmic [Nicotiana sylvestris]
JMSF021J21Sequence627010681 (8)emb|CAN65674.1|2e-63hypothetical protein VITISV_002009 [Vitis vinifera]764001248 (8)gb|EYU43185.1|2e-137hypothetical protein MIMGU_mgv1a002431mg [Erythranthe guttata]
JMSF021P20Sequence664010681 (8)ref|XP_002270988.3|1e-75PREDICTED: probable threonine--tRNA ligase, cytoplasmic [Vitis vinifera]720001248 (8)gb|KDO58457.1|2e-127hypothetical protein CISIN_1g0468081mg, partial [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021P20+ ATATGATAGATGGTTATGGGA
                      ____________________________________________________________
consensus ATATGATAGATGGTTATGGGA
 
. : . : . : . : . : . :
JMFF043B18+ ATCCAAAATCTCAATCTTGTAAGGTTCATTCACAGCCATAATTCTT
JMSF021P20+ TCCTCCTTGATACTATCCAAAATCTCAATCTTGTAAGGTTCATTCACAGCCATAATTCTT
JMSF021J21+ TAAGGTTCATTCACAGCCATAATTCTT
                      ____________________________________________________________
consensus TCCTCCTTGATACTATCCAAAATCTCAATCTTGTAAGGTTCATTCACAGCCATAATTCTT
 
. : . : . : . : . : . :
JMFF043B18+ CTCTGAGCTTCATCTCCGCTGACTTCTTCCCTAATTAGGGGCAAATTTCTCCTGATGATA
JMSF021P20+ CTCTGAGCTTCATCTCTGCTGACTTCTTCCCTAATTAGGGGCAAATTTCTCCTGATGATA
JMFF051I16+ ATTAGGGGCAAATTTCTCCTGATGATA
JMFF051K16+ AATTAGGGGCAAATTTCTCCTGATGATA
JMFF051C18+ AATTAGGGGCAAATTTCTCCTGATGATA
JMSF021J21+ CTCTGAGCTTCATCTCTGCTGACTTCTTCCCTAATTAGGGGCAAATTTCTCCTGATGATA
                      ____________________________________________________________
consensus CTCTGAGCTTCATCTCTGCTGACTTCTTCCCTAATTAGGGGCAAATTTCTCCTGATGATA
 
. : . : . : . : . : . :
JMFF043B18+ CGATCCATCTCCTGCTTAATCCTCTTGAGGTCCTTGTCAGTCAGAGGCTCCATATCAAAA
JMSF021P20+ CGATCCATCTCCTGCTTAATCCTCTTGAGGTCCTTGTCAGTCAGAGGCTCCATATCAAAA
JMFF051I16+ CGATCCATCTCCTGCTTAATCCTCTTGAGGTCCTTGTCAGTCAGAGGCTCCATATCAAAA
JMFF051K16+ CGATCCATCTCCTGCTTAATCCTCTTGAGGTCCTTGTCAGTCAGAGGCTCCATATCAAAA
JMFF051C18+ CGATCCATCTCCTGCTTAATCCTCTTGAGGTCCTTGTCAGTCAGAGGCTCCATATCAAAA
JMSF021J21+ CGATCCATCTCCTGCTTAATCCTCTTGAGGTCCTTGTCAGTCAGAGGCTCCATATCAAAA
                      ____________________________________________________________
consensus CGATCCATCTCCTGCTTAATCCTCTTGAGGTCCTTGTCAGTCAGAGGCTCCATATCAAAA
 
. : . : . : . : . : . :
JMFF043B18+ TCATAGTAAAACCCATTCTCAATCCACGGCCCAATAGTTACTTTTGCATTTGGATAGATC
JMSF021P20+ TCATAGTAAAACCCATTCTCAATCCACGGCCCAATAGTTACTTTTGCATTTGGATAGATC
JMFF051I16+ TCATAGTAAAACCCATTCTCAATCCACGGCCCAATAGTTACTTTTGCATTTGGATAGATC
JMFF051K16+ TCATAGTAAAACCCATTCTCAATCCACGGCCCAATAGTTACTTTTGCATTTGGATAGATC
JMFF051C18+ TCATAGTAAAACCCATTCTCAATCCACGGCCCAATAGTTACTTTTGCATTTGGATAGATC
JMSF021J21+ TCATAGTAAAACCCATTCTCAATCCACGGCCCAATAGTTACTTTTGCATTTGGATAGATC
                      ____________________________________________________________
consensus TCATAGTAAAACCCATTCTCAATCCACGGCCCAATAGTTACTTTTGCATTTGGATAGATC
 
. : . : . : . : . : . :
JMFF043B18+ TTTTGAACAGCCATGGCCATCACATGAGCACACGTGTGGCGGATTCTGAGGAGCCTCTCA
JMSF021P20+ TTTTGAACAGCCATGGCCATCACATGAGCACACGTGTGGCGGATTCTGAGGAGCCTCTCA
JMFF051I16+ TTTTGAACAGCCATGGCCATCACATGAGCACACGTGTGGCGGATTCTGAGGAGCCTCTCA
JMFF051K16+ TTTTGAACAGCCATGGCCATCACATGAGCACACGTGTGGCGGATTCTGAGGAGCCTCTCA
JMFF051C18+ TTTTGAACAGCCATGGCCAAGTCATGAGCACACGTGTGGCGGATTCTGAGGAGCCTCTCA
JMSF002L24+ CATCACATGAGCACACGTGTGGCGGATTCTGAGGAGCCTCTCA
JMSF021J21+ TTTTGAACAGCCATGGCCATCACATGAGCACACGTGTGGCGGATTCTGAGGAGCCTCTCA
                      ____________________________________________________________
consensus TTTTGAACAGCCATGGCCATCACATGAGCACACGTGTGGCGGATTCTGAGGAGCCTCTCA
 
. : . : . : . : . : . :
JMFF043B18+ GACGACTCATTAGTAGGGAGAACAACTCTCTCCTTCTGGGCGCTATTCTCATCAACATCA
JMSF021P20+ GACGACTCATTAGTAGGGAGAACAACTCTCTCCTTCTGGGCGCTATTCTCATCAACATCA
JMFF051I16+ GACGACTCATTAGTAGGGAGAACAACTCTCTCCTTCTGGGCGCTATTCTCATCAACATCA
JMFF051K16+ GACGACTCATTAGTAGGGAGAACAACTCTCTCCTTCTGGGCGCTATTCTCATCAACATCA
JMFF051C18+ GACGACTCATTAGTAGGGAGAACAACTCTCTCCTTCTGGGCGCTATTCTCATCAACATCA
JMSF002L24+ GACGAGTCATTAGTAGGGAGAACAACTCTCTCCTTCTGGGCGCTATTCTCATCAACATCA
JMSF009C07+ A
JMSF021J21+ GACGAGTCATTAGTAGGGAGAACAACTCTCTCCTTCTGGGCGCTATTCTCATCAACATCA
                      ____________________________________________________________
consensus GACGACTCATTAGTAGGGAGAACAACTCTCTCCTTCTGGGCGCTATTCTCATCAACATCA
 
. : . : . : . : . : . :
JMFF043B18+ TCAGCAAGAGGCTTCACTTGTGTGTCTGGAGAATCAGTGGCGACGGCGGAGGAAGCGGCG
JMSF021P20+ TCAGCAAGAGGCTTCACTTGTGTGTCTGGAGAATCAGTGGCGACGGCGGAGGAAGCGGCG
JMFF051I16+ TCAGCAAGAGGCTTCACTTGTGTGTCTGGAGAATCAGTGGCGACGGCGGAGGAAGCGGCG
JMFF051K16+ TCAGCAAGAGGCTTCACTTGTGTGTCTGGAGAATCAGTGGCGACGGCGGAGGAAGCGGCG
JMFF051C18+ TCAGCAAGAGGCTTCACTTGTGTGTCTGGAGAATCAGTGGCGACGGCGGAGGAAGCGGCG
JMSF002L24+ TCAGCAAGAGGCTTCACTTGTGTGTCTGGAGAATCAGTAGCGACGGCGGAGGAGGCGGCG
JMSF009C07+ TCAGCAAGAGGCTTCACTTGTGTGTCTGGAGAATCAGTGGCGACGGCGGAGGAAGCGGCG
JMSF021J21+ TCAGCAAGAGGCTTCACTTGTGTGTCTGGAGAATCAGTAGCGACGGCGGAGGAGGCGGCG
                      ____________________________________________________________
consensus TCAGCAAGAGGCTTCACTTGTGTGTCTGGAGAATCAGTGGCGACGGCGGAGGAAGCGGCG
 
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JMFF043B18+ GAGATGCACCTGAAACTGCTTCGCCTGGTGGCAGTGGAGCTGGAGGGGTGGAATACGAAT
JMSF021P20+ GAGATGCACCTGAAACTGCTTCGCCTGGTGGCAGTGGAGCTGGAGGGGTGGAATACGAAT
JMFF051I16+ GAGATGCACCTGAAACTGCTTCGCCTGGTGGCAGTGGAGCTGGAGGGGTGGAATACGAAT
JMFF051K16+ GAGATGCACCTGAAACTGCTTCGCCTGGTGGCAGTGGAGCTGGAGGGGTGGAATACGAAT
JMFF051C18+ GAGATGCACCTGAAACTGCTTCGCCTGGTGGCAGTGGAGCTGGAGGGGTGGAATACGAAT
JMSF002L24+ GAGATGCACCTGAAACTGCTTCGCCTGGTGGCAGTGGAGCTGGAGGGGTGGAATACGAAT
JMSF009C07+ GAGATGCACCTGAAACTGCTTCGCCTGGTGGCAGTGGAGCTGGAGGGGTGGAATACGAAT
JMSF021J21+ GAGATGCACCTGAAACTGCTTCGCCTGGTGGCAGTGGAGCTGGAGGGGTGGAATACGAAT
                      ____________________________________________________________
consensus GAGATGCACCTGAAACTGCTTCGCCTGGTGGCAGTGGAGCTGGAGGGGTGGAATACGAAT
 
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JMFF043B18+ AGGGCAGTGGGAAATTGGCGGCGTTTGGTGAGGGAAGAGAAAGTGGAATTGGAATTGGAA
JMSF021P20+ AGGGCAGTGGGAAATTGGCGGCGTTTGGTGAGGGAAGAGAAAGTGGAATTGGAATTGGAA
JMFF051I16+ AGGGCAGTGGGAAATTGGCGGCGTTTGGTGAGGGAAGAGAAAGTGGAATTGGAATTGGAA
JMFF051K16+ AGGGCAGTGGGAAATTGGCGGCGTTTGGTGAGGGAAGAGAAAGTGGAATTGGAATTGGAA
JMFF051C18+ AGGGCAGTGGGAAATTGGCGGCGTTTGGTGAGGGAAGAGAAAGTGGAATTGGAATTGGAA
JMSF002L24+ AGGGCAGTGGGAAATTGGCGGCGTTTGGTGAGGGAAGAGAAAGTGGAATTGGAATTGGAA
JMSF009C07+ AGGGCAGTGGGAAATTGGCGGCGTTTGGTGAGGGAAGAGAAAGTGGAATTGGAATTGGAA
JMSF021J21+ AGGGCAGTGGGAAATTGGCGGCGTTTGGTGAGGGAAGAGAAAGTGGAATTGGAATTGGAA
                      ____________________________________________________________
consensus AGGGCAGTGGGAAATTGGCGGCGTTTGGTGAGGGAAGAGAAAGTGGAATTGGAATTGGAA
 
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JMFF043B18+ TTGGGAGAAAGCGCGAAGAGAGAGCGGGAAGTGGGTAGCGATAAGGTGGCCATCCTTTGC
JMSF021P20+ TTGGGAGAAAGCGCGAAGAGAGAGCGGGAAGTGGGTAGCGATAAGGTGGCCATCCTTTGC
JMFF051I16+ TTGGGAGAAAGCGCGAAGAGAGAGCGGGAAGTGGGTAGCGATAAGGTGGCCATCCTTTGC
JMFF051K16+ TTGGGAGAAAGCGCGAAGAGAGAGCGGGAAGTGGGTAGCGATAAGGTGGCCATCCTTTGC
JMFF051C18+ TTGGGAGAAAGCGCGAAGAGAGAGCGGGAAGTGGGTAGCGATAAGGTGGCCATCCTTTGC
JMSF002L24+ TTGGGAGAAAGCGCGAAGAGAGAGCGGGAAGTGGGTAGCGATAAGGTGGCCATCCTTTGC
JMSF009C07+ TTGGGAGAAAGCGCGAAGAGAGAGCGGGAAGTGGGTAGCGATAAGGTGGCCATCCTTTGC
JMSF021J21+ TTGGGAGAAAGCGCGAAGAGAGAGCGGGAAGTGGGTAGCGATAAGGTGGCCATCCTTTGC
                      ____________________________________________________________
consensus TTGGGAGAAAGCGCGAAGAGAGAGCGGGAAGTGGGTAGCGATAAGGTGGCCATCCTTTGC
 
. : . : . : . : . : . :
JMFF043B18+ AGGATGGTGAGGTTCTTCATTGATCTTCTTCCTCGTCTCTAC
JMSF021P20+ AGGATGGTGAGGTTCTTCATTGATCTTCTTCCTCGTCTCTAC
JMFF051I16+ AGGATGGTGAGGTTCTTCATTGATCTTCTCCCTCGTCTCTACATTTC
JMFF051K16+ AGGATGGTGAGGTTCTTCATTGATCTTCTCCCTCGTCTCTACATTTC
JMFF051C18+ AGGATGGTGAGGTTCTTCATTGGTCTTCTCCCTCGTCTCTACATTTC
JMSF002L24+ AGGATGGTTAGGTTCTTCATTGATCTTCTTCCTCGTCTCTACATTTC
JMSF009C07+ AGGATGGTGAGGTTCTTCATTGATCTTCTTCCTCGTCTCTAC
JMSF021J21+ AGGATGGTTAGGTTCTTCATTGATCTTCTTCCTCGTCTCTACATTTCACTTCTGTGGTCC
                      ____________________________________________________________
consensus AGGATGGTGAGGTTCTTCATTGATCTTCTTCCTCGTCTCTACATTTCACTTCTGTGGTCC