Contig 010680:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021J10Sequence707010680 (2)ref|XP_009598900.1|1e-49PREDICTED: transcriptional adapter ADA2-like isoform X4 [Nicotiana tomentosifor807014040 (2)ref|XP_009608211.1|5e-60PREDICTED: transcriptional adapter ADA2-like isoform X3 [Nicotiana tomentosifor
JMSF036K17Sequence591010680 (2)ref|XP_009598900.1|4e-22PREDICTED: transcriptional adapter ADA2-like isoform X4 [Nicotiana tomentosifor664014040 (2)emb|CDP17436.1|4e-21unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021J10+ CATGACCCTATATGGATGATTGCTTTTGTGAGGCTGTACTTCTGCTC
                      ____________________________________________________________
consensus CATGACCCTATATGGATGATTGCTTTTGTGAGGCTGTACTTCTGCTC
 
. : . : . : . : . : . :
JMSF021J10+ CAACAGAAAAGCATTCAATGCAGAGGTCAAAATCAGAGCATACTGCACATTTAATACGGA
                      ____________________________________________________________
consensus CAACAGAAAAGCATTCAATGCAGAGGTCAAAATCAGAGCATACTGCACATTTAATACGGA
 
. : . : . : . : . : . :
JMSF036K17+ CCCGGAGATGTCTTTGTTGCAGTAATTACAGTGGTATGAAGCCTTTTTCCCATCAC
JMSF021J10+ TCTTCCCGGAGATGTCTTTGTTGCAGTAATTACAGTGGTATGAAGCCTTTTTCCCATCAC
                      ____________________________________________________________
consensus TCTTCCCGGAGATGTCTTTGTTGCAGTAATTACAGTGGTATGAAGCCTTTTTCCCATCAC
 
. : . : . : . : . : . :
JMSF036K17+ TCAAACTTTGACCTGCTGTTGCAGTTTCCAAACTCTCCACATTTTGGGCAGTCCGTTTCC
JMSF021J10+ TCAAACTTTGACCTGCTGTTCCAGTTTCCAAACTCTCCACATTTTGGGCAGTCCGTTTCC
                      ____________________________________________________________
consensus TCAAACTTTGACCTGCTGTTGCAGTTTCCAAACTCTCCACATTTTGGGCAGTCCGTTTCC
 
. : . : . : . : . : . :
JMSF036K17+ TCTTTGAGCGACTCTGGCTGGGATCATCGTCGGCGGAGTGAGGTACAGCTCGCGAACGAC
JMSF021J10+ TCTTTGAGCGACTCTGGCTGGGATCATCGTCGGCGGAGTGAGGTACAGCTCGCGAACGAC
                      ____________________________________________________________
consensus TCTTTGAGCGACTCTGGCTGGGATCATCGTCGGCGGAGTGAGGTACAGCTCGCGAACGAC
 
. : . : . : . : . : . :
JMSF036K17+ CCATCTGAGCTCAACTAGAGCCCGATTCCGATTCCGGGCTCGATGTTGGAAAACGACAAT
JMSF021J10+ CCATCTGAGCTCAACTAGAGCCCGATTCCGATTCCGGGCTCGATGTTGGAAAACGACAAT
                      ____________________________________________________________
consensus CCATCTGAGCTCAACTAGAGCCCGATTCCGATTCCGGGCTCGATGTTGGAAAACGACAAT
 
. : . : . : . : . : . :
JMSF036K17+ TCTCGTTGGGCGGCGGAGTTGAGAATCCCCTAACTATTTTCCGGGCCCGATGGGGTGCAG
JMSF021J10+ TCTCGTTGGGCGGCGGAGTTGAGAATCCCCTAACTATTTTCCGGGCCCGATGGGGTGCAG
                      ____________________________________________________________
consensus TCTCGTTGGGCGGCGGAGTTGAGAATCCCCTAACTATTTTCCGGGCCCGATGGGGTGCAG
 
. : . : . : . : . : . :
JMSF036K17+ AACAGTGTTTCGGGGCGGGTTTGTGTGGAAGGATCCGAATTTGAGATGATTGTGTGCCCT
JMSF021J10+ AACAGTGTTTCGGGGCGGGTTTGTGTGGAAGGATCCGAATTTGAGATGATTGTGTGCCCT
                      ____________________________________________________________
consensus AACAGTGTTTCGGGGCGGGTTTGTGTGGAAGGATCCGAATTTGAGATGATTGTGTGCCCT
 
. : . : . : . : . : . :
JMSF036K17+ TGATCGAGGTCATACACTACACAGTTATTTCTCGTTTGGGGCTGAGACGAGATTCCACGA
JMSF021J10+ TGATCGAGGTCATACACTACACAGTTATTTCTCGTTTGGGGCTGAGACGAGATTCCACGA
                      ____________________________________________________________
consensus TGATCGAGGTCATACACTACACAGTTATTTCTCGTTTGGGGCTGAGACGAGATTCCACGA
 
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JMSF036K17+ TGTTTTGCGTTGCGCTAAGAGAGCAGTTGAGAATGGGATGTCCTCTCTCGCATTGGTTAC
JMSF021J10+ TGTTTTGCGTTGCGCTAAGAGAGCAGTTGAGAATGGGATGTCCTCTCTCGCATTGGTTAC
                      ____________________________________________________________
consensus TGTTTTGCGTTGCGCTAAGAGAGCAGTTGAGAATGGGATGTCCTCTCTCGCATTGGTTAC
 
. : . : . : . : . : . :
JMSF036K17+ AAGCTCTTGGACTTGATTTGTTTCCTGCTTTTCTGCTTACAATTTTTCGACAGTTTTTTT
JMSF021J10+ AAGCTCTTGGACTTGATTTGTTTCCTGCTTTTCTGCTTACAATTTTTCGACAGTTTTTTT
                      ____________________________________________________________
consensus AAGCTCTTGGACTTGATTTGTTTCCTGCTTTTCTGCTTACAATTTTTCGACAGTTTTTTT
 
. : . : . : . : . : . :
JMSF036K17+ AATATAAAAAACCTTTGTTTGATTCTGCCTGACTTTTGCAATTGCTAATTTTTC
JMSF021J10+ AATATAAAAAACCTTTGTTTGATTCTGCCTGACTTTTGCAATTGCTAATTTTTCAGGACC
                      ____________________________________________________________
consensus AATATAAAAAACCTTTGTTTGATTCTGCCTGACTTTTGCAATTGCTAATTTTTCAGGACC