Contig 010675:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023H12Sequence493010675 (3)
JMFS141E11Sequence616010675 (3)
JMSF020L23Sequence151010675 (3)711021448gb|ABN10955.2|4e-124auxin response factor 8 [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS141E11+ TCATGAGGCTGCTGACCAATTCCTGATGTTGAAAGCTTCATATTTTTTC
                      ____________________________________________________________
consensus TCATGAGGCTGCTGACCAATTCCTGATGTTGAAAGCTTCATATTTTTTC
 
. : . : . : . : . : . :
JMFS141E11+ CTCCACCTCCAGGCTCCACCCCCCCTATTATATAATATGTTGTATAATTACCTTAAAAAT
                      ____________________________________________________________
consensus CTCCACCTCCAGGCTCCACCCCCCCTATTATATAATATGTTGTATAATTACCTTAAAAAT
 
. : . : . : . : . : . :
JMFS141E11+ TATAATTATCCAGTCAGTTATAGCGCATAAGATCCCGGCTTCCAACCCTCAACAACACCA
JMFS023H12+ GATCCCGGCTTCCAACCCTCAACAACACCA
                      ____________________________________________________________
consensus TATAATTATCCAGTCAGTTATAGCGCATAAGATCCCGGCTTCCAACCCTCAACAACACCA
 
. : . : . : . : . : . :
JMFS141E11+ TTATCTCATCAAACCCTAAACTCTGAACCAGATTCAACACCCTGAACCTCGCGCCAACGC
JMFS023H12+ TTATCTCATCAAACCCTAAACTCTGAACCAGATTCAACACCCTGAACCTCGCGCCAACGC
                      ____________________________________________________________
consensus TTATCTCATCAAACCCTAAACTCTGAACCAGATTCAACACCCTGAACCTCGCGCCAACGC
 
. : . : . : . : . : . :
JMFS141E11+ CCCTGCTGAACCCCATCCTCAATTCAAACCCGAATCTGGAGTGCATTAAGCCGGAAAGCG
JMFS023H12+ CCCTGCTGAACCCCATCCTCAATTCAAACCCGAATCTGGAGTGCATTAAGCCGGAAAGCG
                      ____________________________________________________________
consensus CCCTGCTGAACCCCATCCTCAATTCAAACCCGAATCTGGAGTGCATTAAGCCGGAAAGCG
 
. : . : . : . : . : . :
JMFS141E11+ AAGCAGAGGAGCTCAATTCCACCAAAGATCAACCCAATTAACTCAACTCTCCTTCTCCAA
JMFS023H12+ AAGCAGAGGAGCTCAATTCCACCAAAGATCAACCCAATTAACTCAACTCTCCTTCTCCAA
                      ____________________________________________________________
consensus AAGCAGAGGAGCTCAATTCCACCAAAGATCAACCCAATTAACTCAACTCTCCTTCTCCAA
 
. : . : . : . : . : . :
JMFS141E11+ AACCTCCATGAAAGCAGGAGAAGAGCAAATCCCTTGGCTTTTCTTTTTTTCCTTGAATGA
JMFS023H12+ AACCTCCATGAAAGCAGGAGAAGAGCAAATCCCTTGGCTTTTCTTTTTTTCCTTGAATGA
                      ____________________________________________________________
consensus AACCTCCATGAAAGCAGGAGAAGAGCAAATCCCTTGGCTTTTCTTTTTTTCCTTGAATGA
 
. : . : . : . : . : . :
JMFS141E11+ GTGAGCACAGTACAGTAAGCTAAGCCAAGAAGGCTCCCAGTAGTCCCGAGCTGAAACTCA
JMFS023H12+ GTGAGCACAGTACAGTAAGCTAAGCCAAGAAGGCTCCCAGTAGTCCCGAGCTGAAACTCA
                      ____________________________________________________________
consensus GTGAGCACAGTACAGTAAGCTAAGCCAAGAAGGCTCCCAGTAGTCCCGAGCTGAAACTCA
 
. : . : . : . : . : . :
JMFS141E11+ GAGCTTTTCGTGTGCTATCGCTGTCTGACTGACGACGCTTTTGAAGAGAGAGAGAGAGAG
JMFS023H12+ GAGCTTTTCGTGTGCTATCGCTGTCTGACTGACGACGCTTTTGAAGAGAGAGAGAGAGAG
JMSF020L23+ GACGCTTTTNAAGAGAGAGAGAGAGAG
                      ____________________________________________________________
consensus GAGCTTTTCGTGTGCTATCGCTGTCTGACTGACGACGCTTTTGAAGAGAGAGAGAGAGAG
 
. : . : . : . : . : . :
JMFS141E11+ AGTTTGGGCGCTCCCCTCTTTTTATAGCCCACCCGACCAAGCTCGACCTGGTAGCAGTAG
JMFS023H12+ AGTTTGGGCGCTCCCCTCTTTTTATAGCCCACCCGACCAAGCTCGACCTGGTAGCAGTAG
JMSF020L23+ AGNTTGGGCGCTCCCNTCTTTNTATAGCCCACCCGACCAAGCTCGACCTGGTAGCAGTAG
                      ____________________________________________________________
consensus AGTTTGGGCGCTCCCCTCTTTTTATAGCCCACCCGACCAAGCTCGACCTGGTAGCAGTAG
 
. : . : . : . : . : . :
JMFS141E11+ AGAGAGAAAGTGCGATGACCGATGAAA
JMFS023H12+ AGAGAGAAAGTGCGATGACCGATGAAAGAGAAAGCAGTATAGA
JMSF020L23+ AGAGAGAAAGTGCGATGACCGATGAAAGAGAAAGCAGTATAGAGTGTAGAGTGTAGGATC
                      ____________________________________________________________
consensus AGAGAGAAAGTGCGATGACCGATGAAAGAGAAAGCAGTATAGAGTGTAGAGTGTAGGATC