clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF011A22 | Sequence | 528 | 010660 (9) | ref|XP_002277525.1| | 5e-72 | PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] emb|CBI40422.3| unnam | 743 | 008371 (9) | ref|XP_009773920.1| | 1e-83 | PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris] |
JMFF044O24 | Sequence | 604 | 010660 (9) | ref|XP_002277525.1| | 6e-81 | PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] emb|CBI40422.3| unnam | 573 | 008371 (9) | ref|XP_009773920.1| | 7e-33 | PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris] |
JMFF047O08 | Sequence | 418 | 010660 (9) | gb|ACU19312.1| | 1e-39 | unknown [Glycine max] | 395 | 008371 (9) | |||
JMSF001E19 | Sequence | 372 | 010660 (9) | ref|XP_006396278.1| | 4e-40 | hypothetical protein EUTSA_v10028603mg [Eutrema salsugineum] gb|ESQ37731.1| hypo | 754 | 008371 (9) | ref|XP_009773920.1| | 4e-86 | PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris] |
JMSF012O23 | Sequence | 280 | 010660 (9) | ref|XP_006444969.1| | 1e-26 | hypothetical protein CICLE_v10020054mg [Citrus clementina] gb|ESR58209.1| hypoth | 741 | 008371 (9) | ref|XP_009773920.1| | 1e-90 | PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris] |
JMSF018I15 | Sequence | 532 | 010660 (9) | ref|XP_002277525.1| | 3e-63 | PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] emb|CBI40422.3| unnam | 816 | 008371 (9) | ref|XP_009773920.1| | 3e-103 | PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris] |
JMSF029B05 | Sequence | 651 | 010660 (9) | ref|XP_011093122.1| | 5e-89 | PREDICTED: CAAX prenyl protease 1 homolog [Sesamum indicum] | 772 | 008371 (9) | ref|XP_009773920.1| | 1e-106 | PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris] |
JMSF038M18 | Sequence | 667 | 010660 (9) | ref|XP_002277525.1| | 7e-109 | PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] emb|CBI40422.3| unnam | 862 | 008371 (9) | ref|XP_009773920.1| | 1e-121 | PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris] |
JMSF039M18 | Sequence | 361 | 010660 (9) | gb|ACU19312.1| | 3e-35 | unknown [Glycine max] | 482 | 008371 (9) | ref|XP_009773920.1| | 2e-25 | PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF038M18+ AATCAGAATAGGGTATAGTGTCATCATAACNAGAGACAGGACAAACATGAAACC
____________________________________________________________
consensus AATCAGAATAGGGTATAGTGTCATCATAACNAGAGACAGGACAAACATGAAACC
. : . : . : . : . : . :
JMSF038M18+ CCATAGATATATAGCCAAGTAAGGACCTCCTTTCTGAACTATCAGAATGATTGCAGCCAC
JMSF029B05+ TGAACTATCAGAATGATTGCAGCCAC
____________________________________________________________
consensus CCATAGATATATAGCCAAGTAAGGACCTCCTTTCTGAACTATCAGAATGATTGCAGCCAC
. : . : . : . : . : . :
JMSF038M18+ AATAGGAGGACCAATCACAACAGATAAGATAATACCTTTGATCATATCCCTGAAGAATAG
JMSF029B05+ AATAGGAGGACCAATCACAACAGATAAGATAATACCTTTGATCATATCCCTGAAGAATAG
JMFF044O24+ TGAAGAATAG
____________________________________________________________
consensus AATAGGAGGACCAATCACAACAGATAAGATAATACCTTTGATCATATCCCTGAAGAATAG
. : . : . : . : . : . :
JMSF038M18+ CCACATCGTTTGCTTGTTGAAACCGTGGCGGGCCTCAATCACAAACGTTGAGTACAAAGA
JMFF011A22+ CTCAATCACAAACGTTGAGTACAAAGA
JMSF029B05+ CCACATCGTTTGCTTGTTGAAACCGTGGCGGGCCTCAATCACAAACGTTGAGTACAAAGA
JMFF044O24+ CCACATCGTNTGCTTGTTGAAACCGTGGCGGGCCTCAATCACAAACGTTGAGTACAAAGA
____________________________________________________________
consensus CCACATCGTTTGCTTGTTGAAACCGTGGCGGGCCTCAATCACAAACGTTGAGTACAAAGA
. : . : . : . : . : . :
JMSF038M18+ AAATGGCAAGTCAGTAATCTGCGACCAAAACATAACACCTGCTAAAAATGCAAGTGTGTG
JMFF011A22+ AAATGGCAAGTCAGTAATCTGCGACCAAAACATAACACCTGCTAAAAATGCAAGTGTGTG
JMSF029B05+ AAATGGCAAGTCAGTAATCTGCGACCAAAACATAACACCTGCTAAAAATGCAAGTGTGTG
JMFF044O24+ AAATGGCAAGTCAGTAATCTGCGACCAAAACATAACACCTGCTAAAAATGCAAGTGTGTG
JMSF018I15+ AAGTCAGTAATCTGCGACCAAAACATAACACCTGCTAAAAATGCAAGTGTGTG
____________________________________________________________
consensus AAATGGCAAGTCAGTAATCTGCGACCAAAACATAACACCTGCTAAAAATGCAAGTGTGTG
. : . : . : . : . : . :
JMSF038M18+ TAATATCTCATTTTCTGTGTTAAGACCAAGGAACACCAAAAAATCTC-CTGATTTCTTCC
JMFF011A22+ TAATATCTCATTTTCTGTGTTAAGACCAAGGAACACCAAAAAATCTC-CTGATTTCTTCC
JMSF001E19+ TCC
JMSF039M18+ TGTGTTAAGACCAAGGAACACCAAAAAATCTCAATGATTTCTTCC
JMSF029B05+ TAATATCTCATTTTCTGTGTTAAGACCAAGGAACACCAAAAAATCTC-CTGATTTCTTCC
JMFF047O08+ TCC
JMFF044O24+ TAATATCTCATNTTCTGTGTTAAGACCAAGGAACACCAAAAAATCTC-CTGATTTCTTCC
JMSF018I15+ TAATATCTCATTTTCTGTGTTAAGACCAAGGAACACCAAAAAATCTC-CTGATTTCTTCC
____________________________________________________________
consensus TAATATCTCATTTTCTGTGTTAAGACCAAGGAACACCAAAAAATCTC-CTGATTTCTTCC
. : . : . : . : . : . :
JMSF038M18+ AGAACCAGGGTAAGATCCCAAAATACAAAATTGCAGAGTCCATGAGTATGGTGACGAACT
JMFF011A22+ AGAACCAGGGTAAGATCCCAAAATACAAAATTGCAGAGTCCATGAGTATGGTGACGAACT
JMSF012O23+ ACT
JMSF001E19+ AGAACCAGGGTAAGATCCCAAAATACAAAATTGCAGAGTCCATGAGTATGGTGACGAACT
JMSF039M18+ AGAACCAGGGTAAGATCCCAAAATACAAAATTGCAGAGTCCATGAGTATGGTGNCGAACT
JMSF029B05+ AGAACCAGGGTAAGATCCCAAAATACAAAATTGCAGAGTCCATGAGTATGGTGACGAACT
JMFF047O08+ AGAACCAGGGTAAGATCCCAAAATACAAAATGCCAGAGTCCATGAGTATGGTGACGAACT
JMFF044O24+ AGAACCAGGGTAAGATCCCAAAATACAAAATTGCAGAGTCCATGAGTATGGTGACGAACT
JMSF018I15+ AGAACCAGGGTAAGATCCCAAAATACAAAATTGCAGAGTCCATGAGTATGGTGACGAACT
____________________________________________________________
consensus AGAACCAGGGTAAGATCCCAAAATACAAAATTGCAGAGTCCATGAGTATGGTGACGAACT
. : . : . : . : . : . :
JMSF038M18+ CATGCACAAAGTGAAAATCACTTTTATCAATACTATAAGCTCGAGACTTCTCAAACTTTT
JMFF011A22+ CATGCACAAAGTGAAAATCACTTTTATCAATACTATAAGCTCGAGACTTCTCAAACTTTT
JMSF012O23+ CATGCACAAAGTGAAAATCACTTTTATCAATACTATAAGCTCGAGACTTCTCAAACTTTT
JMSF001E19+ CATGCACAAAGTGAAAATCACTTTTATCAATACTATAAGCTCGAGACTTCTCAAACTTTT
JMSF039M18+ CATGCACAAAGTGAAAATCACTTTTNTCAATACTATAAGCTCGAGNCTTCTCNAACTTTT
JMSF029B05+ CATGCACAAAGTGAAAATCACTTTTATCAATACTATAAGCTCGAGACTTCTCAAACTTTT
JMFF047O08+ CATGCACAAAGTGAAAATCACTTTTATCAATACTATAAGCTCGAGACTTCTCAAACTTTT
JMFF044O24+ CATGCACAAAGTGAAAATCACTTTTATCAATACTATAAGCTCGAGACTTCTCAAACTTTT
JMSF018I15+ CATGCACAAAGTGAAAATCACTTTTATCAATACTATAAGCTCGAGACTTCTCAAACTTTT
____________________________________________________________
consensus CATGCACAAAGTGAAAATCACTTTTATCAATACTATAAGCTCGAGACTTCTCAAACTTTT
. : . : . : . : . : . :
JMSF038M18+ CTTGGCTGATTACTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
JMFF011A22+ CTTGGCTGATTACTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
JMSF012O23+ CTTGGCTGATTACTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
JMSF001E19+ CTTGGCTGATTACTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
JMSF039M18+ NTTGGCTGATTNCTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
JMSF029B05+ CTTGGCTGATTACTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
JMFF047O08+ CTTGGCTGATTACTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
JMFF044O24+ CTTGGCTGATTACTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
JMSF018I15+ CTTGGCTGATTACTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
____________________________________________________________
consensus CTTGGCTGATTACTCCTACCAAAGGTTTTGGAAGTGTTGGCAACTTAAGAGCAGCATGTT
. : . : . : . : . : . :
JMSF038M18+ GCCTTATATCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
JMFF011A22+ GCCTTATATCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
JMSF012O23+ GCCTTATATCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
JMSF001E19+ GCCTTATATCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
JMSF039M18+ GCCTTATNTCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
JMSF029B05+ GCCTTATATCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
JMFF047O08+ GCCTTATATCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
JMFF044O24+ GCCTTATATCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
JMSF018I15+ GCCTTATATCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
____________________________________________________________
consensus GCCTTATATCAAGATAAGTCTCAAAAATATACATCAATATCATGAAACCAACAACAGCTT
. : . : . : . : . : . :
JMSF038M18+ CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
JMFF011A22+ CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
JMSF012O23+ CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
JMSF001E19+ CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
JMSF039M18+ CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
JMSF029B05+ CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
JMFF047O08+ CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
JMFF044O24+ CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
JMSF018I15+ CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
____________________________________________________________
consensus CCATATAAGGAAACGCCATGGCAGAATTTCCGAGCTGCAGATAGAGAGAAACAGAGAGAG
. : . : . : . : . : . :
JMSF038M18+ AGCGAAGGTCTAT
JMFF011A22+ AGCGAAGGTCTATGACTGAGATTCTGAGACGATTTTTTCGGAATAGGGAGAAGGGCTTTC
JMSF012O23+ AGCGAAGGTCTATGACTGAGATTCTGAGACGATTT
JMSF001E19+ AGCGAAGGTCTATGACTGAGATTCTGAGACGATTTTTTCGGAATAGGGAGAAGGGCTTTC
JMSF039M18+ AGNGAAGGTCT
JMSF029B05+ AGCGAAGGTCTATGACTGAGATTCTGAGACGATTTTTTCGGAATAGGGAGAAGGGCTTTC
JMFF047O08+ AGCGAAGGTCTATGACTGAGATTCTGAGACGATTTTTTCGGAATAGGGAGAAGGGCTTTC
JMFF044O24+ AGCGAAGGTCTATGACTGAGATTCTGAGACGATTTTTTCGGAATAGGGAGAAGGGCTTTC
JMSF018I15+ AGCGAAGGTCTATGACTGAGATTCTGAGACGATTTTTTCGGAATAGGGAGAAGGGCTTTC
____________________________________________________________
consensus AGCGAAGGTCTATGACTGAGATTCTGAGACGATTTTTTCGGAATAGGGAGAAGGGCTTTC
. : . : . : . : . : . :
JMFF011A22+ TCCTACTTGGGTCAGTTCAATC
JMSF001E19+ TCCTACTT
JMSF029B05+ TCCTACTTGGGTCAGTTCAATCC
JMFF047O08+ TCCTACTTGGGTCAGTTCAATCCGGTTGAACAGGGTCGGCTAAACCCCC
JMFF044O24+ TCCTACTTGGGTCAGTTCAATCCGGTTGAACAGGGTCGGCTAAACCCCC
JMSF018I15+ TCCTACTTGGGTCAGTTCAATCCGGTTGAACAGGGTCGGCTAAACCCCCAGATATTTTCC
____________________________________________________________
consensus TCCTACTTGGGTCAGTTCAATCCGGTTGAACAGGGTCGGCTAAACCCCCAGATATTTTCC