| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS120D08 | Sequence | 627 | 010633 (4) | ref|XP_009802382.1| | 2e-122 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | |||||
| JMSF008F18 | Sequence | 454 | 010633 (4) | ref|XP_009802382.1| | 1e-72 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 802 | 008446 (4) | ref|XP_009592854.1| | 6e-118 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana tomentosiformis] |
| JMSF014J17 | Sequence | 467 | 010633 (4) | ref|XP_009802382.1| | 2e-38 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 813 | 008446 (4) | ref|XP_009592854.1| | 2e-119 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana tomentosiformis] |
| JMSF037L01 | Sequence | 632 | 010633 (4) | ref|XP_009802382.1| | 2e-113 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 673 | 008446 (4) | ref|XP_009592854.1| | 3e-105 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS120D08+ CATTCCCAACCAAGAAGCCCTTAAAATTAATAACGGGATTCTTGATTCCCTTGTTTCTGC
____________________________________________________________
consensus CATTCCCAACCAAGAAGCCCTTAAAATTAATAACGGGATTCTTGATTCCCTTGTTTCTGC
. : . : . : . : . : . :
JMFS120D08+ GGTAGATAATTTGAGATAGCTGTGGAACATAGTGCCCTGCATAACTTTCTCCAGAAATGT
JMSF037L01+ TGAGATAGCTGTGGGACATAATGCCCTGCATAACTTTCTCCAGCAATGT
____________________________________________________________
consensus GGTAGATAATTTGAGATAGCTGTGGGACATAGTGCCCTGCATAACTTTCTCCAGCAATGT
. : . : . : . : . : . :
JMFS120D08+ AAAAATCTCTATGCTTGTACTGAGGAAATCTTTCAAACCAGTTGACAAGAAATATGTATG
JMSF037L01+ AAAAATCTCTATACTTGTATTGAGGAAACCTATCAAACCACTTGACAAGAAATGCATATG
____________________________________________________________
consensus AAAAATCTCTATGCTTGTATTGAGGAAATCTTTCAAACCAGTTGACAAGAAATGTGTATG
. : . : . : . : . : . :
JMFS120D08+ CATCTTCAGCCGTTCTCTGATCGCCTGCAGTATACAAATCTGAGGTTGTATTCGAGTATG
JMSF037L01+ TATCTTCAGCTGTTCTTTGATCACCTGCAGTATTCAAATCTGAGGTTGTATTTGAGTAAG
JMSF008F18+ GAGTAAG
____________________________________________________________
consensus TATCTTCAGCTGTTCTTTGATCGCCTGCAGTATTCAAATCTGAGGTTGTATTTGAGTAAG
. : . : . : . : . : . :
JMFS120D08+ AGAAACCAACACCAGCTGGTGATTCAAGAAAAAGCAGGTTTGCCAACTTGTTCCACGAAT
JMSF037L01+ AGAAACCAACACCAGCTGGAGATTCAAGAAACAGCAAATTTGCCAACTTGTTCCAAGAAT
JMSF008F18+ AGAAACCAACACCAGCTGGAGATTCAAGAAACAGCAAATTTGCCAACTTGTTCCAAGAAT
____________________________________________________________
consensus AGAAACCAACACCAGCTGGAGATTCAAGAAACAGCAAATTTGCCAACTTGTTCCAAGAAT
. : . : . : . : . : . :
JMFS120D08+ AAGGATTGAGGTAAAGAGTCTTCCCATCAGCATTAATGTGAAACGGCCCAATCTCCTCAG
JMSF037L01+ AAGGATTAAGGTAAAGAGTTTTCCCATCAGAATTGATGTGAAATGGCCCAATCTCTTCAG
JMSF008F18+ AAGGATTAAGGTAAAGAGTTTTCCCATCAGAATTGATGTGAAATGGCCCAATCTCTTCAG
____________________________________________________________
consensus AAGGATTAAGGTAAAGAGTTTTCCCATCAGAATTGATGTGAAATGGCCCAATCTCTTCAG
. : . : . : . : . : . :
JMFS120D08+ CAGCTCCATAAGCTATAGAAGAACATCCAGGCCCTCCATTGAGCCACAAAAGGAGTGGCC
JMSF037L01+ CAGCCCCATAAGCTACAGAAGAGCATCCAGGTCCTCCATTGAGCCACAAAATGAGTGGTC
JMSF008F18+ CAGCCCCATAAGCTACAGAAGAGCATCCAGGTCCTCCATTGAGCCACAAAATGAGTGGTC
JMSF014J17+ TACAGAAGAGCATCCAGGTCCTCCATTGAGCCACAAAATGAGTGGTC
____________________________________________________________
consensus CAGCCCCATAAGCTACAGAAGAGCATCCAGGTCCTCCATTGAGCCACAAAATGAGTGGTC
. : . : . : . : . : . :
JMFS120D08+ TTTCATCAGGATTCTGGCTTTCCGGAGACTCAATCAACCAGTAAAACAGTGCCCTCCCAG
JMSF037L01+ TTTTCCCAGGGTTTCGACTTGCCGGTGACTCAATGAACCAGTAAAACAGTGCCCTCCCAG
JMSF008F18+ TTTTCCCAGGGTTTCGACTTGCCGGTGACTCAATGAACCAGTAAAACAGTGCCCTCCCAG
JMSF014J17+ TTTTCCCAGGGTTTCGACTTGCCGGTGACTCAATGAACCAGTAAAACAGTGCCCTCCCAG
____________________________________________________________
consensus TTTTCCCAGGGTTTCGACTTGCCGGTGACTCAATGAACCAGTAAAACAGTGCCCTCCCAG
. : . : . : . : . : . :
JMFS120D08+ CTTGTTCATTCACTGTCACATAGCCGGAGTACTGCGAGAAATCAACATTGTTTGGCTGTC
JMSF037L01+ CTGTTTCATTCACTGTCACATAACCTGAGTAGTGATTGAATTCAACATTGGCTGGCTGCC
JMSF008F18+ CTGTTTCATTCACTGTCACATAACCTGAGTAGTGATTGAATTCAACATTGGCTGGCTGCC
JMSF014J17+ CTGTTTCATTCACTGTCACATAACCTGAGTAGTGATTGAATTCAACATTGGCTGGCTGCC
____________________________________________________________
consensus CTGTTTCATTCACTGTCACATAACCTGAGTAGTGATTGAATTCAACATTGGCTGGCTGCC
. : . : . : . : . : . :
JMFS120D08+ CCGGCAAAGATGATATCCTATCTCTCTCTTGATCT
JMSF037L01+ CTGGCAAATGTGTTATCCTATCTCTAACTTGATCTG
JMSF008F18+ CTGGCAAATGTGTTATCCTATCTCTAACTTGATCTGCATTTTTCAAACAATTACAGGCAC
JMSF014J17+ CTGGCAAATGTGTTATCCTATCTCTAACTTGATCTGCATTTTTCAAACAATTACAGGCAC
____________________________________________________________
consensus CTGGCAAATGTGTTATCCTATCTCTAACTTGATCTGCATTTTTCAAACAATTACAGGCAC
. : . : . : . : . : . :
JMSF008F18+ CCAGAAAAAGAAATGCCCAGCAGAGTGCTGGCAATAGTGAGTGCAGAGGGTGCCTCATTG
JMSF014J17+ CCAGAAAAAGAAATGCCCAGCAGAGTGCTGGCAATAGTGAGTGCAGAGGGTGCCTCATTG
____________________________________________________________
consensus CCAGAAAAAGAAATGCCCAGCAGAGTGCTGGCAATAGTGAGTGCAGAGGGTGCCTCATTG
. : . : . : . : . : . :
JMSF008F18+ AAACAATCTCTCAGACAACTAAAAC
JMSF014J17+ AAACAATCTCTCAGACAACTAAAACTAAATCAAGCTAAAGTACTAATCTCAATATATTAG
____________________________________________________________
consensus AAACAATCTCTCAGACAACTAAAACTAAATCAAGCTAAAGTACTAATCTCAATATATTAG
. : . : . : . : . : . :
JMSF014J17+ GGAATTCTAGGGAATTTATCTGAGATTATGGCAGTACAGGTACAGCTAATAATATATTTA
____________________________________________________________
consensus GGAATTCTAGGGAATTTATCTGAGATTATGGCAGTACAGGTACAGCTAATAATATATTTA
. : . : . : . : . : . :
JMSF014J17+ TAATCTTGGATCCAAAAATATTCTTGGATCTAATACTTGCGTCATGCTAAACAAAAGACC
____________________________________________________________
consensus TAATCTTGGATCCAAAAATATTCTTGGATCTAATACTTGCGTCATGCTAAACAAAAGACC