Contig 010630:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS011F04Sequence627010630 (2)ref|XP_006339413.1|9e-65PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like [Solanu
JMSF014C10Sequence224010630 (2)780024507gb|KDP40093.1|3e-103hypothetical protein JCGZ_02091 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS011F04+ AAAATAATGTCAATCACAAGA
                      ____________________________________________________________
consensus AAAATAATGTCAATCACAAGA
 
. : . : . : . : . : . :
JMFS011F04+ GTGCCATGCTCCTCGGCCCGTCTGCCAAATATCTGAGAGAAATGGAGAACAGAGTCCAAG
                      ____________________________________________________________
consensus GTGCCATGCTCCTCGGCCCGTCTGCCAAATATCTGAGAGAAATGGAGAACAGAGTCCAAG
 
. : . : . : . : . : . :
JMFS011F04+ TAATCCATGACCTTTTCATTGATTGGCATGCATACGTGCATTTTAAGTGTGAATATGTGT
                      ____________________________________________________________
consensus TAATCCATGACCTTTTCATTGATTGGCATGCATACGTGCATTTTAAGTGTGAATATGTGT
 
. : . : . : . : . : . :
JMFS011F04+ CTTTTCAGGAGTTCCATATAAAGCCTGAAGGCTGCAGGTCGCAAATGACGATTTGGGATA
                      ____________________________________________________________
consensus CTTTTCAGGAGTTCCATATAAAGCCTGAAGGCTGCAGGTCGCAAATGACGATTTGGGATA
 
. : . : . : . : . : . :
JMFS011F04+ ACCCTATTGGATAGCAGTGGAAAGACAATGAGAGAAGGCACAATCTTGAGAACCAAGGCC
                      ____________________________________________________________
consensus ACCCTATTGGATAGCAGTGGAAAGACAATGAGAGAAGGCACAATCTTGAGAACCAAGGCC
 
. : . : . : . : . : . :
JMFS011F04+ TTCTCCAACAATTTCCAAGCAGAGGGCACATTATTCTCCCAGCAAATGTGAGACACCAAG
                      ____________________________________________________________
consensus TTCTCCAACAATTTCCAAGCAGAGGGCACATTATTCTCCCAGCAAATGTGAGACACCAAG
 
. : . : . : . : . : . :
JMFS011F04+ AGATGGGCCAGGTGAATAGAAGGCAGAGGCGCTCCAGCTGAGGTCAAATGTGAGGAAACT
                      ____________________________________________________________
consensus AGATGGGCCAGGTGAATAGAAGGCAGAGGCGCTCCAGCTGAGGTCAAATGTGAGGAAACT
 
. : . : . : . : . : . :
JMFS011F04+ TGAATTGCCCACACCAAAGGGTCACAACCCTTCTCTTGGGCCACCTTCGTTAGCTCCAAA
                      ____________________________________________________________
consensus TGAATTGCCCACACCAAAGGGTCACAACCCTTCTCTTGGGCCACCTTCGTTAGCTCCAAA
 
. : . : . : . : . : . :
JMFS011F04+ ACATCATCCCAGATGCTGCTGCACTGTACAGACACCTCCATCACATCACTCTCTCATATC
JMSF014C10+ TGCTGCACTGTACAGACACCTCCATCACATCACTCTCTCATATC
                      ____________________________________________________________
consensus ACATCATCCCAGATGCTGCTGCACTGTACAGACACCTCCATCACATCACTCTCTCATATC
 
. : . : . : . : . : . :
JMFS011F04+ CCTTTTCTTTCCTACTCAGAGTCAGAGACCTCTGTTACTGGATGTATGGGAAATTGGGGA
JMSF014C10+ CCTTTTCTTTCCTACTCAGAGTCAGAGACCTCTGTTACTGGATGTATGGGAAATTGGGGA
                      ____________________________________________________________
consensus CCTTTTCTTTCCTACTCAGAGTCAGAGACCTCTGTTACTGGATGTATGGGAAATTGGGGA
 
. : . : . : . : . : . :
JMFS011F04+ TTGGGGATTGGGGACTGGGGATGAGGAGTCTTGCAGAGTTTTTTACCAGAAGAATAATGA
JMSF014C10+ TTGGGGATTGGGGACTGGGGATGAGGAGTCTTGCAGAGTTTTTTACCAGAAGAATAATGA
                      ____________________________________________________________
consensus TTGGGGATTGGGGACTGGGGATGAGGAGTCTTGCAGAGTTTTTTACCAGAAGAATAATGA
 
. : . : . : . : . : . :
JMFS011F04+ ATCCTT
JMSF014C10+ ATCCTTTGGAGTTTTGAGAGTGGGAAGTTGTGGGAGTGGAGACTATTTGGTGGTGCAGTC
                      ____________________________________________________________
consensus ATCCTTTGGAGTTTTGAGAGTGGGAAGTTGTGGGAGTGGAGACTATTTGGTGGTGCAGTC