Contig 010618:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019K09Sequence557010618 (3)ref|XP_009625421.1|5e-41PREDICTED: novel plant SNARE 13 [Nicotiana tomentosiformis]757002790 (3)ref|XP_004252947.1|4e-105PREDICTED: novel plant SNARE 13-like [Solanum lycopersicum]
JMSF011K12Sequence360010618 (3)723002790 (3)ref|XP_004252947.1|8e-103PREDICTED: novel plant SNARE 13-like [Solanum lycopersicum]
JMSF011N02Sequence308010618 (3)797002790 (3)ref|XP_004252947.1|5e-55PREDICTED: novel plant SNARE 13-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF019K09+ GGTGGATTTTTACTCTCCTCGT
                      ____________________________________________________________
consensus GGTGGATTTTTACTCTCCTCGT
 
. : . : . : . : . : . :
JMFF019K09+ CTTTGATTTCACGATCAAATTCTTTGATTAACCTTTTACATTCCCTCATCTTCCCAGTAA
                      ____________________________________________________________
consensus CTTTGATTTCACGATCAAATTCTTTGATTAACCTTTTACATTCCCTCATCTTCCCAGTAA
 
. : . : . : . : . : . :
JMFF019K09+ GCTCCTCAAGCTGTTTACTCTGTCTATTAGAGTCTTTGATTTTATCAAGCTTTTGAAATC
                      ____________________________________________________________
consensus GCTCCTCAAGCTGTTTACTCTGTCTATTAGAGTCTTTGATTTTATCAAGCTTTTGAAATC
 
. : . : . : . : . : . :
JMFF019K09+ CATTTGCGAGGGCTCGGAAATTGTCCCGGATTTCCCCATGGATCTGCTCCATTTGAGGGT
                      ____________________________________________________________
consensus CATTTGCGAGGGCTCGGAAATTGTCCCGGATTTCCCCATGGATCTGCTCCATTTGAGGGT
 
. : . : . : . : . : . :
JMSF011N02+ TCATCCGCAATTCCAAATTCGCCATGATTGCTGTCTCTCTCTTTCTCCAATCGCTCGCGG
JMFF019K09+ TCATCCGCAATTCCAAATTCGCCATGATTGCTGTCTCTCTCTTTCTCCAATCGCTCGCGG
JMSF011K12+ TCATCCGCAATTCCAANTTCGCCATGATTGCTGTCTCTCTCTTTCTCCAATCGCTCGCGG
                      ____________________________________________________________
consensus TCATCCGCAATTCCAAATTCGCCATGATTGCTGTCTCTCTCTTTCTCCAATCGCTCGCGG
 
. : . : . : . : . : . :
JMSF011N02+ CCGGCTATGCACCCACTGCCGGAGTAAGAAAACCCTCACCGGCAGATCAAAACTAACTCG
JMFF019K09+ CCGGCTATGCACCCACTGCCGGAGTAAGAAAACCCTCACCGGCAGATCAAAACTAACTCG
JMSF011K12+ CCGGCTATGCACCCACTGCCGGAGTAAGAAAACCCTCACCGGCAGATCAAAACTAACTCG
                      ____________________________________________________________
consensus CCGGCTATGCACCCACTGCCGGAGTAAGAAAACCCTCACCGGCAGATCAAAACTAACTCG
 
. : . : . : . : . : . :
JMSF011N02+ GCACACACCTTAACACAGGAGAAGAAACTGCGCCGTTTCCTGTGACTCACACCATTCTCG
JMFF019K09+ GCACACACCTTAACACAGGAGAAGAAACTGCGCCGTTTCCTGTGACTCACACCATTCTCG
JMSF011K12+ GCACACACCTTAACACAGGAGAAGAAACTGCGCCGTTTCCTGTGACTCACACCATTCTCG
                      ____________________________________________________________
consensus GCACACACCTTAACACAGGAGAAGAAACTGCGCCGTTTCCTGTGACTCACACCATTCTCG
 
. : . : . : . : . : . :
JMSF011N02+ CTGTGTTGATGAAGAGTGGTTGTGGTGCACAATCGAGAAGCAGGAGAGAATTAGGATTGT
JMFF019K09+ CTGTGTTGATGAAGAGTGGTTGTGGTGCACAATCGAGAAGCAGGAGAGAATTAGGATTGT
JMSF011K12+ CTGTGTTGATGAAGAGTGGTTGTGGTGCACAATCGAGAAGCAGGAGAGAATTAGGATTGT
                      ____________________________________________________________
consensus CTGTGTTGATGAAGAGTGGTTGTGGTGCACAATCGAGAAGCAGGAGAGAATTAGGATTGT
 
. : . : . : . : . : . :
JMSF011N02+ GATGAACAGAAAGAGAAAATAAATTTTAAAAAATTGTAATTTGAGATGGTTTAGGGTTCT
JMFF019K09+ GATGAACAGAAAGAGAAAATAAATTTTAAAAAATTGTAATTTGAGATGGTTTAGGGTTCT
JMSF011K12+ GATGAACAGAAAGAGAAAATAAATTTTAAAAAATTGTAATTTGAGATGGTTTAGGGTTCT
                      ____________________________________________________________
consensus GATGAACAGAAAGAGAAAATAAATTTTAAAAAATTGTAATTTGAGATGGTTTAGGGTTCT
 
. : . : . : . : . : . :
JMFF019K09+ TCGATCAAAGAAGGATAAAGAGAGACAAAGCTGTGAAGATACGAGAGAGAAAGAC
JMSF011K12+ TCGATCAAAGAAGGATAAAGAGAGACAAAGCTGTGAAGATACGAGAGAGAAAGACAGTCT
                      ____________________________________________________________
consensus TCGATCAAAGAAGGATAAAGAGAGACAAAGCTGTGAAGATACGAGAGAGAAAGACAGTCT