Contig 010594:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS031C11Sequence592010594 (4)ref|XP_009767906.1|2e-92PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal isoform X1 [Nicotiana
JMSF009C22Sequence319010594 (4)ref|XP_009597891.1|6e-15PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment778013741 (4)ref|XP_009589417.1|2e-147PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment
JMSF019D09Sequence225010594 (4)ref|XP_009597891.1|9e-10PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana toment806013741 (4)gb|KJB12548.1|6e-107hypothetical protein B456_002G023900 [Gossypium raimondii]
JMSF039A24Sequence644010594 (4)ref|XP_009767906.1|4e-102PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal isoform X1 [Nicotiana

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS031C11+ AGTGTCATATAAAG
JMSF039A24+ ATATTGGCATGGTTGGCAATATACTTAACAGCATCAGGACCAAGAGTGTCATATAAAG
                      ____________________________________________________________
consensus ATATTGGCATGGTTGGCAATATACTTAACAGCATCAGGACCAAGAGTGTCATATAAAG
 
. : . : . : . : . : . :
JMFS031C11+ GGACAGAGATAAATGAATATGCTGAGCAGGCATGGTCTACAATGAGCCATTCGGGCATAT
JMSF039A24+ GGACAGAGATAAATGAATATGCTGAGCAGGCATGGTCTACAATGAGCCATTCGGGCATAT
                      ____________________________________________________________
consensus GGACAGAGATAAATGAATATGCTGAGCAGGCATGGTCTACAATGAGCCATTCGGGCATAT
 
. : . : . : . : . : . :
JMFS031C11+ TTATGAAATAAATCCCCACGCGAGCTCCTGGTTCTAGTCCACAAAAACGAAGCCCAGAAC
JMSF039A24+ TTATGAAATAAATCCCCACGCGAGCTCCTGGTTCTAGTCCACAAAAACGAAGCCCAGAAC
                      ____________________________________________________________
consensus TTATGAAATAAATCCCCACGCGAGCTCCTGGTTCTAGTCCACAAAAACGAAGCCCAGAAC
 
. : . : . : . : . : . :
JMFS031C11+ CTATTGCTGACCGAGCTGTTCCAGCCTCTCCATATGTCATCCATTTGTATTCTCCAATGG
JMSF039A24+ CTATTGCTGACCGAGCTGTTCCAGCCTCTCCATATGTCATCCATTTGTATTCTCCAATGG
                      ____________________________________________________________
consensus CTATTGCTGACCGAGCTGTTCCAGCCTCTCCATATGTCATCCATTTGTATTCTCCAATGG
 
. : . : . : . : . : . :
JMFS031C11+ TTCCATCTACCCGTATACGTGTGCCCAAATATTTGTAATCTTGAAAGGTTTCAACTGCAT
JMSF039A24+ TTCCATCTACCCGTATACGTGTGCCCAAATATTTGTAATCTTGAAAGGTTTCAACTGCAT
                      ____________________________________________________________
consensus TTCCATCTACCCGTATACGTGTGCCCAAATATTTGTAATCTTGAAAGGTTTCAACTGCAT
 
. : . : . : . : . : . :
JMFS031C11+ GCACAAAGTTGTCATGCAGTGTACCAATATCAGGATGATCAGGGAATCTAGTTACAAGCT
JMSF039A24+ GCACAAAGTTGTCATGCAGTGTACCAATATCAGGATGATCAGGGAATCTAGTTACAAGCT
                      ____________________________________________________________
consensus GCACAAAGTTGTCATGCAGTGTACCAATATCAGGATGATCAGGGAATCTAGTTACAAGCT
 
. : . : . : . : . : . :
JMFS031C11+ TCAAAGGAGAGATCGCAGATCTGTATACATCCCACTTTCCAGTCTGCAATTTTTCAGGAA
JMSF039A24+ TCAAAGGAGAGATCGCAGATCTGTATACATCCCACTTTCCAGTCTGCAATTTTTCAGGAA
JMSF009C22+ GTCTGCAATTTTTCAGGAA
                      ____________________________________________________________
consensus TCAAAGGAGAGATCGCAGATCTGTATACATCCCACTTTCCAGTCTGCAATTTTTCAGGAA
 
. : . : . : . : . : . :
JMFS031C11+ GAACTACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
JMSF039A24+ GAACTACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
JMSF019D09+ ACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
JMSF009C22+ GAACTACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
                      ____________________________________________________________
consensus GAACTACACTGTACCTTTGACCCTGAAAATATTCGCCGGCCGTGAGGTTTGAACGGATCA
 
. : . : . : . : . : . :
JMFS031C11+ ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
JMSF039A24+ ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
JMSF019D09+ ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
JMSF009C22+ ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
                      ____________________________________________________________
consensus ATGAGAAGGAATCCCCGTCGGCGAGCGGAAGCAGGTGGCCTTGAATGGCTTTCAGGCGTC
 
. : . : . : . : . : . :
JMFS031C11+ GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGAAAAGATAAATC
JMSF039A24+ GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGAAAAGATAAATC
JMSF019D09+ GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGGAAAGATAAATC
JMSF009C22+ GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGAAAAGATAAATC
                      ____________________________________________________________
consensus GCTCGGCTGCCGGTTCCATTGACAATTCGGCTTTCTATTTTGTTGTAGAAAAGATAAATC
 
. : . : . : . : . : . :
JMFS031C11+ GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTT
JMSF039A24+ GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTTGAAATAC
JMSF019D09+ GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTTGAAATAC
JMSF009C22+ GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTTGAAATACAGACAAGAAAAGAGG
                      ____________________________________________________________
consensus GAACTTGAAAGAAATTTTCTCCCAGAAAATCTAAACTTGAAATACAGACAAGAAAAGAGG
 
. : . : . : . : . : . :
JMSF009C22+ CAATGAATATAGATATATATATTTAAAGAAAATGCGTGATGTATTAGTTTCCAATGCCCC
                      ____________________________________________________________
consensus CAATGAATATAGATATATATATTTAAAGAAAATGCGTGATGTATTAGTTTCCAATGCCCC