clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS045G06 | Sequence | 258 | 010585 (3) | ref|XP_009804960.1| | 1e-09 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 | |||||
JMSF007P22 | Sequence | 287 | 010585 (3) | ref|XP_006340709.1| | 3e-06 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 | 165 | 018130 | gb|EYU38322.1| | 2e-10 | hypothetical protein MIMGU_mgv1a025630mg, partial [Erythranthe guttata] |
JMSF050H21 | Sequence | 671 | 010585 (3) | ref|XP_006340709.1| | 3e-61 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 |
This contig is upended
. : . : . : . : . : . :
JMSF050H21+ CTCCGGTGAAAG
____________________________________________________________
consensus CTCCGGTGAAAG
. : . : . : . : . : . :
JMSF050H21+ AGTTGGAAGAGAGATCGAAGTAGCGGATACTCTGCGGGAGGTCCCCGGGGATGCCGCCGG
____________________________________________________________
consensus AGTTGGAAGAGAGATCGAAGTAGCGGATACTCTGCGGGAGGTCCCCGGGGATGCCGCCGG
. : . : . : . : . : . :
JMSF050H21+ AGAGCTTGTTCCCGGCGACATTGAAGATTTTCAGGCCGNCGAGCTTCGAAATTTCCGGCG
____________________________________________________________
consensus AGAGCTTGTTCCCGGCGACATTGAAGATTTTCAGGCCGNCGAGCTTCGAAATTTCCGGCG
. : . : . : . : . : . :
JMSF050H21+ GCATTCCGCCGGAGAACGAGTTGTACTGCAGAAAAACAGAATTCAGGAGCGAGCATTTCG
____________________________________________________________
consensus GCATTCCGCCGGAGAACGAGTTGTACTGCAGAAAAACAGAATTCAGGAGCGAGCATTTCG
. : . : . : . : . : . :
JMSF050H21+ CGAGGGAGGAAGGAACACTCCCGTTGAATGAATTGGAGCTGATGCTCAGCTTACGTAGCA
____________________________________________________________
consensus CGAGGGAGGAAGGAACACTCCCGTTGAATGAATTGGAGCTGATGCTCAGCTTACGTAGCA
. : . : . : . : . : . :
JMSF050H21+ ACCGGAGATTAGCGATTTGCGGGGTAAGCGGGCCGCCGAGCTGGCGCCGAGGGAGGTTGA
____________________________________________________________
consensus ACCGGAGATTAGCGATTTGCGGGGTAAGCGGGCCGCCGAGCTGGCGCCGAGGGAGGTTGA
. : . : . : . : . : . :
JMFS045G06+ CATTTCACGCCGCCCCAGTCGCAGGGAGCCGCCGGTG
JMSF050H21+ GTTCACTCACGCGACCATTCTCACATTTCACGCCGCCCCAGTCGCAGGGAGCCGCCGGCG
____________________________________________________________
consensus GTTCACTCACGCGACCATTCTCACATTTCACGCCGCCCCAGTCGCAGGGAGCCGCCGGTG
. : . : . : . : . : . :
JMFS045G06+ ACGACGAGTCCCAGTCGGCGAGCGCGTCAAGCGGGTCGTGAACACTCTGCTTGAAAGATG
JMSF050H21+ ACGACGAGTCCCAGTCGGCGAGCGCGTCAAGCGGGTCGTGAACACTGAGCTTGAAAGA-G
JMSF007P22+ AGTCGGCGAGCGCGTCAAGCGGGTCGTGAACACTGAGCTTGAAAGA-G
____________________________________________________________
consensus ACGACGAGTCCCAGTCGGCGAGCGCGTCAAGCGGGTCGTGAACACTGAGCTTGAAAGA-G
. : . : . : . : . : . :
JMFS045G06+ TTAAGCGCCTGGATCTCGGCTAGGTCTTCGGCGCTGCGCTGGGCGGCGCATGCACAGGAA
JMSF050H21+ TTAAGCGCCTGGATCTCGGCTAGGTTCTCGGCGCTGCGCTGGGCGGCGCATGCACAGGAA
JMSF007P22+ TTAAGCGCCTGGATCTCGGCTAGGTTCTCGGCGCTGCGCTGGGCGGCGCATGCACAGGAA
____________________________________________________________
consensus TTAAGCGCCTGGATCTCGGCTAGGTTCTCGGCGCTGCGCTGGGCGGCGCATGCACAGGAA
. : . : . : . : . : . :
JMFS045G06+ ACAAGAACAATACAGAAAATCAGTGCAGGTAAGATGGAAGACATGGATGGAAACGGTATC
JMSF050H21+ ACAAGAACAATACAGAAAATCAGTGCAGGGAAGATGGAAGACATGGATGGAAACGGTATC
JMSF007P22+ ACAAGAACAATACAGAAAATCAGTGCAGGGAAGATGGAAGACATGGATGGAAACGGTATC
____________________________________________________________
consensus ACAAGAACAATACAGAAAATCAGTGCAGGGAAGATGGAAGACATGGATGGAAACGGTATC
. : . : . : . : . : . :
JMFS045G06+ ATTTCAGGTCTATAGTCTATACTGAGAACCAAGGGAAACAG
JMSF050H21+ ATTTCAGGTCTATAGTCTATACTGAGAACCAAGGGAAACAGGTAGCCATACTCATAGATA
JMSF007P22+ ATTTCAGGTCTATAGTCTATACTGAGAACCAAGGGAAACAGGTAGCCATACTCATAGATA
____________________________________________________________
consensus ATTTCAGGTCTATAGTCTATACTGAGAACCAAGGGAAACAGGTAGCCATACTCATAGATA
. : . : . : . : . : . :
JMSF050H21+ CACACACAACCTCTCTCTCTCTATATCTGTGTATGTAAAGCTTTCTCTCTCTAGAGAA
JMSF007P22+ CACACACAACCTCTCTCTCTCTATATCTGTGTATGTAAAGCTTTCTCTCTCTAGAGAACC
____________________________________________________________
consensus CACACACAACCTCTCTCTCTCTATATCTGTGTATGTAAAGCTTTCTCTCTCTAGAGAACC