Contig 010569:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021J05Sequence504010569 (5)ref|XP_009616762.1|89.4PREDICTED: uncharacterized protein LOC104109239 [Nicotiana tomentosiformis]
JMSF005C09Sequence243010569 (5)126003955 (67)gb|KJB54393.1|1e-16hypothetical protein B456_009G074800 [Gossypium raimondii]
JMSF024K03Sequence691010569 (5)ref|XP_009616762.1|198PREDICTED: uncharacterized protein LOC104109239 [Nicotiana tomentosiformis]789011414 (4)ref|XP_010096275.1|3e-78hypothetical protein L484_027013 [Morus notabilis] gb|EXB63670.1| hypothetical p
JMSF031C02Sequence599010569 (5)ref|XP_009800283.1|130PREDICTED: uncharacterized protein LOC104246216 [Nicotiana sylvestris]702011414 (4)ref|XP_010096275.1|2e-61hypothetical protein L484_027013 [Morus notabilis] gb|EXB63670.1| hypothetical p
JMSF045B16Sequence755010569 (5)ref|XP_009616762.1|222PREDICTED: uncharacterized protein LOC104109239 [Nicotiana tomentosiformis]715011414 (4)ref|XP_010096275.1|8e-50hypothetical protein L484_027013 [Morus notabilis] gb|EXB63670.1| hypothetical p

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045B16+ TN
                      ____________________________________________________________
consensus TN
 
. : . : . : . : . : . :
JMSF024K03+ CACTTGCATTCCCTTGGC
JMSF045B16+ TGATATTAGAAGATCCATGGTCTCTTTACCCAGTTGCTCAAGCACTTGCATTCCCTTGGC
                      ____________________________________________________________
consensus TGATATTAGAAGATCCATGGTCTCTTTACCCAGTTGCTCAAGCACTTGCATTCCCTTGGC
 
. : . : . : . : . : . :
JMSF024K03+ AGTAAAAGCTTTTCCTGTCTCCAGAATGGATGGCGCACCAGAACCAGTTTCCCCAGGTAA
JMSF045B16+ AGTAAAAGCTTTTCCTGTCTCCAGAATGGATGGCGCACCAGAACCAGTTTCCCCAGGTAA
                      ____________________________________________________________
consensus AGTAAAAGCTTTTCCTGTCTCCAGAATGGATGGCGCACCAGAACCAGTTTCCCCAGGTAA
 
. : . : . : . : . : . :
JMSF024K03+ GCCACCTTGCTGAATGGATTCCTCAAGCTTGTGAACAAAACTAGAACCCCCTTTCAATGC
JMSF031C02+ TGAACAAAACTAGAACCCCCTTTCAATGC
JMSF045B16+ GCCACCTTGCTGAATGGATTCCTCAAGCTTGTGAACAAAACTAGAACCCCCTTTCAATGC
                      ____________________________________________________________
consensus GCCACCTTGCTGAATGGATTCCTCAAGCTTGTGAACAAAACTAGAACCCCCTTTCAATGC
 
. : . : . : . : . : . :
JMSF024K03+ ATTTCCTAGTGCTTGCCAAGCCCCTGAAGCAATACTCTCAACTGAATTGTCAATGACCTT
JMSF031C02+ ATTTCNTAGTGCTTGCCAAGCCCCTGAAGCAATACTCTCAANTGAATTGTCAATGACCTT
JMSF045B16+ ATTTCCTAGTGCTTGCCAAGCCCCTGAAGCAATACTCTCAACTGAATTGTCAATGACCTT
                      ____________________________________________________________
consensus ATTTCCTAGTGCTTGCCAAGCCCCTGAAGCAATACTCTCAACTGAATTGTCAATGACCTT
 
. : . : . : . : . : . :
JMSF024K03+ CAAGCCCTGGCCAAGGAAAGAATCTTCACTAGCTTTCTCTAATTTATCCAAAGCCTCCTT
JMSF031C02+ CAAGCCCTGGCCAAGGAAAGAATCTTCACTAGCTTTCTNTAATTTATCCAAAGCCTCCNT
JMFF021J05+ TGGCCAAGGAAAGAATCTTCACTAGCTTTCTCTAATTTATCCAAAGCCTCCTT
JMSF045B16+ CAAGCCCTGGCCAAGGAAAGAATCTTCACTAGCTTTCTCTAATTTATCCAAAGCCTCCTT
                      ____________________________________________________________
consensus CAAGCCCTGGCCAAGGAAAGAATCTTCACTAGCTTTCTCTAATTTATCCAAAGCCTCCTT
 
. : . : . : . : . : . :
JMSF024K03+ GCGTCGTTTGTCATTCTCATCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
JMSF031C02+ GCGTCGTTTGTCATTCTCATCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
JMFF021J05+ GCGTCGTTTGTCATTCTCACCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
JMSF045B16+ GCGTCGTTTGTCATTCTCATCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
                      ____________________________________________________________
consensus GCGTCGTTTGTCATTCTCATCTTCACCTTCAATCTCAACTGCAGATGCTTCAGTTTCATT
 
. : . : . : . : . : . :
JMSF024K03+ CTCGTTAGCAGATTCAGACTCCTCAACTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
JMSF031C02+ CTCGTTAGCAGATTCAGACTCCTCAANTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
JMFF021J05+ CTCGTTAGCAGATTCAGACTCCTCAACTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
JMSF045B16+ CTCGTTAGCAGATTCAGACTCCTCAACTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
                      ____________________________________________________________
consensus CTCGTTAGCAGATTCAGACTCCTCAACTGCATTCTGCACGTCAGAAATGCTTTTTGCTGC
 
. : . : . : . : . : . :
JMSF024K03+ TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
JMSF031C02+ TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
JMFF021J05+ TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
JMSF045B16+ TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
                      ____________________________________________________________
consensus TGTTTTAGCAGCCTCAACAGCATTGCGAGAGATCTCTTCGGCAGCAACGGTGGCAACCTT
 
. : . : . : . : . : . :
JMSF024K03+ CTGAAGGTCGGAGAGATAAGAGAAAGCGGAGAACCCCCACCCACCCCATCCACCGCCAGC
JMSF031C02+ NTGAAGGTCGGAGAGATAAGAGAAAGCGGAGAACCCCCACCCACCCCATCCACCGCCAGC
JMFF021J05+ CTGAAGGTCGGAGAGATAAGAGAAAGCGG-GAACCACCACCCACCCCATCCACCGCCAGC
JMSF045B16+ CTGAAGGTCGGAGAGATAAGAGAAAGCGGAGAACCCCCACCCACCCCATCCACCGCCAGC
                      ____________________________________________________________
consensus CTGAAGGTCGGAGAGATAAGAGAAAGCGGAGAACCCCCACCCACCCCATCCACCGCCAGC
 
. : . : . : . : . : . :
JMSF024K03+ ACGGCTGCTATCCTGCGCAGGTGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
JMSF031C02+ ACGGCTGCTATCCTGCGCAGGTGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
JMFF021J05+ ACGGCTGCTATCCTGCGCAGGTGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
JMSF045B16+ ACGGCTGCTATCCTGCGCAGATGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
JMSF005C09+ CTC
                      ____________________________________________________________
consensus ACGGCTGCTATCCTGCGCAGGTGTTCCTTTTGGCGCTTCAGTTGCCGTTGTCGTCGCCTC
 
. : . : . : . : . : . :
JMSF024K03+ CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
JMSF031C02+ CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
JMFF021J05+ CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
JMSF045B16+ CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
JMSF005C09+ CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
                      ____________________________________________________________
consensus CGTTACTCCTTCACCTTCCTGTACAAGTTTTATCTCTTCTTCATTCGAAGATTTGGCCGT
 
. : . : . : . : . : . :
JMSF024K03+ TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
JMSF031C02+ TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
JMFF021J05+ TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
JMSF045B16+ TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
JMSF005C09+ TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
                      ____________________________________________________________
consensus TATCTCCGCCATTTTAGTTCCGAGCGTTCAGTTACTGGTCAGAATCCCGCCGAGGAACAA
 
. : . : . : . : . : . :
JMSF024K03+ CAGATCGCCC
JMSF031C02+ CAGATCGCCCTGCTTCTCGGTGAAGATCC
JMFF021J05+ CAGATCGCCCTGCTTCTCGGTGAAGATCC
JMSF045B16+ CAGATCGCCCTGCTTCTCGGTGAAGATCC
JMSF005C09+ CAGATCGCCCTGCTTCTCGGTGAAGATCCAATGCCACCTCAAATTCAGTGGTTGGGTTTA
                      ____________________________________________________________
consensus CAGATCGCCCTGCTTCTCGGTGAAGATCCAATGCCACCTCAAATTCAGTGGTTGGGTTTA
 
. : . : . : . : . : . :
JMSF005C09+ CCTACCGATCTGGTAAGACTTGTCCTTGACGGCAAAAGGATTCGAAACGAAACGACGTCC
                      ____________________________________________________________
consensus CCTACCGATCTGGTAAGACTTGTCCTTGACGGCAAAAGGATTCGAAACGAAACGACGTCC