Contig 010560:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004A13Sequence244010560 (3)
JMSF004M14Sequence383010560 (3)322004943 (6)
JMSF049E10Sequence646010560 (3)723012769 (2)ref|XP_006348189.1|6e-129PREDICTED: protein DJ-1 homolog D-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF049E10+ TCTCCGCCA
                      ____________________________________________________________
consensus TCTCCGCCA
 
. : . : . : . : . : . :
JMSF049E10+ TGCATCAGCTTAAGTACCAACGCCACATTCAGCGCCACCGAGACCGCCAGCAAGTGCTTC
                      ____________________________________________________________
consensus TGCATCAGCTTAAGTACCAACGCCACATTCAGCGCCACCGAGACCGCCAGCAAGTGCTTC
 
. : . : . : . : . : . :
JMSF049E10+ ATCGCCACCGCCGGCAAACACAGCTTCCTGTGCTTCATTTTTCCGGGGAATCTCAAGAAT
                      ____________________________________________________________
consensus ATCGCCACCGCCGGCAAACACAGCTTCCTGTGCTTCATTTTTCCGGGGAATCTCAAGAAT
 
. : . : . : . : . : . :
JMSF049E10+ TTCCGAACGAAAGCGATAGCTAAAAGAAGAAATGTGAGCGTAAAAGAGACGAGCTTGGGT
                      ____________________________________________________________
consensus TTCCGAACGAAAGCGATAGCTAAAAGAAGAAATGTGAGCGTAAAAGAGACGAGCTTGGGT
 
. : . : . : . : . : . :
JMSF049E10+ TGCTTATATATAGGAGGAGAACAAGAAGCGGCGGCAAAGCAAACCAAGCTTTCTGATATC
                      ____________________________________________________________
consensus TGCTTATATATAGGAGGAGAACAAGAAGCGGCGGCAAAGCAAACCAAGCTTTCTGATATC
 
. : . : . : . : . : . :
JMSF004M14+ CCTCACGGTTACAGTCCATTATTCAAACACTTCTACTCCGTATATG
JMSF049E10+ CCTCTCCTTCGGACCCTCACGGTTACAGTCCATTATTCAAACACTTCTACTCCGTATATG
                      ____________________________________________________________
consensus CCTCTCCTTCGGACCCTCACGGTTACAGTCCATTATTCAAACACTTCTACTCCGTATATG
 
. : . : . : . : . : . :
JMSF004M14+ TCTCCTATGTGCATTGGGTTAGCAGAAATAAAAAAGAAAATAAAAAGAAAAATGAAATCT
JMSF049E10+ TCTCCTATGTGCATTGGGTTAGCAGAAATAAAAAAGAAAATAAAAAGAAAAATGAAATCT
                      ____________________________________________________________
consensus TCTCCTATGTGCATTGGGTTAGCAGAAATAAAAAAGAAAATAAAAAGAAAAATGAAATCT
 
. : . : . : . : . : . :
JMSF004M14+ TGGATAGAAAATTGAATGAAATGGCAATTTCGGGGGAGAAATCTGCTCAACTTCAAGGGA
JMSF049E10+ TGGATAGAAAATTGAATGAAATGGCAATTTCGGGGGAGAAATCTGCTCAACTTCAAGGGA
JMSF004A13+ GGGA
                      ____________________________________________________________
consensus TGGATAGAAAATTGAATGAAATGGCAATTTCGGGGGAGAAATCTGCTCAACTTCAAGGGA
 
. : . : . : . : . : . :
JMSF004M14+ TTATAAAGTATAGTAAGAACTTGTTCTTCTCCTCCCAGAAATTTGCAGTTTTCCAATGCA
JMSF049E10+ TTATAAAGTATAGTAAGAACTTGTTCTTCTCCTCCCAGAAATTTGCAGTTTTCCAATGCA
JMSF004A13+ TTATAAAGTATAGTAAGAACTTGTTCTTCTCCTCCCAGAAATTTGCAGTTTTCCAATGCA
                      ____________________________________________________________
consensus TTATAAAGTATAGTAAGAACTTGTTCTTCTCCTCCCAGAAATTTGCAGTTTTCCAATGCA
 
. : . : . : . : . : . :
JMSF004M14+ AAATCTTGGAGAACTTGTATTAGATTCTTCCCCCTAACTTTTATTAGATAGTACTACGAA
JMSF049E10+ AAATCTTGGAGAACTTGTATTAGATTCTTCCCCCTAACTTTTATTAGATAGTACTACGAA
JMSF004A13+ AAATCTTGGAGAACTTGTATTAGATTCTTCCCCCTAACTTTTATTAGATAGTACTACGAA
                      ____________________________________________________________
consensus AAATCTTGGAGAACTTGTATTAGATTCTTCCCCCTAACTTTTATTAGATAGTACTACGAA
 
. : . : . : . : . : . :
JMSF004M14+ AACTGGTTTCAATGTTTTGAATGGCATACATATAAATGAGAGTTTATATGGAACCATACG
JMSF049E10+ AACTGGTTTCAATGTTTTGAATGGCATACATATAAATGAGAGTTTATATGGAACCATACG
JMSF004A13+ AACTGGTTTCAATGTTTTGAATGGCATACATATAAATGAGAGTTTATATGGAACCATACG
                      ____________________________________________________________
consensus AACTGGTTTCAATGTTTTGAATGGCATACATATAAATGAGAGTTTATATGGAACCATACG
 
. : . : . : . : . : . :
JMSF004M14+ GAGACTAGAGAGAGAGGGGTTTGGTTTCGCTTCGCT
JMSF049E10+ GAGACTAGAGAGAGAGGGGTTTGGTTTCGCTTCGCT
JMSF004A13+ GAGACTAGAGAGAGAGGGGTTTGGTTTCGCTTCGCTGGTTCTGGGAAAGAAAAGCTGACC
                      ____________________________________________________________
consensus GAGACTAGAGAGAGAGGGGTTTGGTTTCGCTTCGCTGGTTCTGGGAAAGAAAAGCTGACC