Contig 010553:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS067B01Sequence618010553 (4)ref|XP_009778598.1|3e-33PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana sylvestris]
JMSF002O07Sequence225010553 (4)710012509 (4)ref|XP_009762973.1|6e-79PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana sylvestris]
JMSF004M15Sequence204010553 (4)357012509 (4)ref|XP_009762973.1|8e-16PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana sylvestris]
JMSF005F24Sequence412010553 (4)ref|XP_009778598.1|1e-20PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS067B01+ ACAGAAGTAAACACCTAGAGGAAAAGTGGATACCTGGG
                      ____________________________________________________________
consensus ACAGAAGTAAACACCTAGAGGAAAAGTGGATACCTGGG
 
. : . : . : . : . : . :
JMFS067B01+ TTCGTCTTCATTCTGGCGCCTTTCTGGGGCATAATCACCAGTCTCTTCATCGCTTTCGGA
                      ____________________________________________________________
consensus TTCGTCTTCATTCTGGCGCCTTTCTGGGGCATAATCACCAGTCTCTTCATCGCTTTCGGA
 
. : . : . : . : . : . :
JMFS067B01+ GCTCGAATTCGCACTGCTCCAACCTCTGCTTCCGCTTATCCGTCTAGAACTCAAGCTCTC
                      ____________________________________________________________
consensus GCTCGAATTCGCACTGCTCCAACCTCTGCTTCCGCTTATCCGTCTAGAACTCAAGCTCTC
 
. : . : . : . : . : . :
JMFS067B01+ GGGTGAACTTCGCCGCCGTCTATACTCCACAAAGACACAAACCATATGAAGCACACACTG
                      ____________________________________________________________
consensus GGGTGAACTTCGCCGCCGTCTATACTCCACAAAGACACAAACCATATGAAGCACACACTG
 
. : . : . : . : . : . :
JMFS067B01+ GCAAGCGTAGCCAATAATCCAGAGCCTGAGAGGCATCAAGGGCGACTCCTTGCGGCTCAT
                      ____________________________________________________________
consensus GCAAGCGTAGCCAATAATCCAGAGCCTGAGAGGCATCAAGGGCGACTCCTTGCGGCTCAT
 
. : . : . : . : . : . :
JMFS067B01+ AACTAACACAGCGATCGAGACTACGATGAAAGCTAAGTTCCAGATGAGATCCAGGATGAC
JMSF005F24+ ACACAGCGATCGAGANTACGATGAAAGNTAAGTTCCAGATGAGATCCAGGATGAC
                      ____________________________________________________________
consensus AACTAACACAGCGATCGAGACTACGATGAAAGCTAAGTTCCAGATGAGATCCAGGATGAC
 
. : . : . : . : . : . :
JMFS067B01+ GATAGGCTTGGAGTAGGCCCAATCGCTCTGTCTCTCCTCGATTTGCTCCGCCGCCGCCTC
JMSF005F24+ GATAGGCTTGGAGTAGGCCCAATCGCTCTGTCTCTCCTCGATTTGCTCCGCCGCCGCGTC
                      ____________________________________________________________
consensus GATAGGCTTGGAGTAGGCCCAATCGCTCTGTCTCTCCTCGATTTGCTCCGCCGCCGCGTC
 
. : . : . : . : . : . :
JMFS067B01+ GCGCACCCGCATCGACGGCTCCCGCATCATCCTCCGACTGCTGGCTCGCCGCAGGAACCG
JMSF005F24+ GCGCACCCGCATCGACGGCTCCCGCATCATCCTCCGACTGCTGGCTCGCCGCAGGAACCG
                      ____________________________________________________________
consensus GCGCACCCGCATCGACGGCTCCCGCATCATCCTCCGACTGCTGGCTCGCCGCAGGAACCG
 
. : . : . : . : . : . :
JMFS067B01+ AGCCGCCCCTCTTAGGCTCGGAGAATTGCGCATGAATCGCCGGCTACGGAAGATCTGGTC
JMSF005F24+ AGCCGCCCCCCTTAGGCTCGGAGAATTGCGCATGAATCGCCGGCTACGGAAGATCTGGTC
JMSF004M15+ GAATCGCCGGCTACGGAAGATCTGGTC
JMSF002O07+ GCTCGGAGAATTGCGCATGAATCGCCGGCTACGGAAGATCTGGTC
                      ____________________________________________________________
consensus AGCCGCCCCTCTTAGGCTCGGAGAATTGCGCATGAATCGCCGGCTACGGAAGATCTGGTC
 
. : . : . : . : . : . :
JMFS067B01+ GTTAAGCAAAGGCGTCGTGTCCACTCCTCCTCCGCCGCTGCCGCCGCCATCGACGGAACC
JMSF005F24+ GTTAAGCAAAGGCGTCGTGTCCACTCCTCCTCCGCCGCTGCCGCCGCCATCGACGGAACC
JMSF004M15+ GTTAAGCAAAGGCGTCGTGTCCACTCCTCNTCCGCCGCTGCCGCCGCCATCGACGGAACC
JMSF002O07+ GTTAAGCAAAGGCGTCGTGTCCACTCCTCCTCCGCCGCTGCCGCCGCCATCGACGGAACC
                      ____________________________________________________________
consensus GTTAAGCAAAGGCGTCGTGTCCACTCCTCCTCCGCCGCTGCCGCCGCCATCGACGGAACC
 
. : . : . : . : . : . :
JMFS067B01+ GGAGTTAGCGTCTGCGCCGGAAGTTTCCTCGTTCGGATCC
JMSF005F24+ GGAGTTAGCGTCTGCGCCGGAAGTTTCCTCGTTCGGATCCCTAGCCGTCGACATCTCTGC
JMSF004M15+ GGAGTTAGCGTCTGCGCCGGAAGTTTCCTCGTTCGGATCCCTAGCCGTCGACATCTCTGC
JMSF002O07+ GGAGTTAGCGTCTGCGCCGGAAGTTTCCTCGTTCGGATCCCTAGCCGTCGACATCTCTGC
                      ____________________________________________________________
consensus GGAGTTAGCGTCTGCGCCGGAAGTTTCCTCGTTCGGATCCCTAGCCGTCGACATCTCTGC
 
. : . : . : . : . : . :
JMSF005F24+ CGGAAAATTACAACAATTTCTCCTTAGGTACACAGAAGGAAGATAGGAAGAAG
JMSF004M15+ CGGAAAATTACAACAATTTCTCCTTAGGTACACAGAAGGAAGATAGGAAGAAG
JMSF002O07+ CGGAAAATTACAACAATTTCTCCTTAGGTACACAGAAGGAAGATAGGAAGAAGCTCACCC
                      ____________________________________________________________
consensus CGGAAAATTACAACAATTTCTCCTTAGGTACACAGAAGGAAGATAGGAAGAAGCTCACCC