Contig 010549:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002I12Sequence276010549 (2)791004237 (2)gb|KCW80777.1|6e-70hypothetical protein EUGRSUZ_C021581, partial [Eucalyptus grandis]
JMSF016M15Sequence422010549 (2)ref|XP_011078173.1|4e-06PREDICTED: chloroplast envelope membrane protein-like isoform X3 [Sesamum indic795004237 (2)gb|KCW80777.1|3e-75hypothetical protein EUGRSUZ_C021581, partial [Eucalyptus grandis]

Alignment

This contig is upended


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JMSF016M15+                                                                     CA
                      ____________________________________________________________
consensus                                                                       CA
 
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JMSF016M15+           CCTCATCCAGCATTTCATCGTCCTTCAAACCAAACCAGTTCCCTTCCTCGTCGAAGAACT
                      ____________________________________________________________
consensus             CCTCATCCAGCATTTCATCGTCCTTCAAACCAAACCAGTTCCCTTCCTCGTCGAAGAACT
 
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JMSF016M15+           TCTGCCACCAACTCTTCCTACCCCTGCTCTTCTTAGAATTCCTTTTCTTGACATGGGGAA
                      ____________________________________________________________
consensus             TCTGCCACCAACTCTTCCTACCCCTGCTCTTCTTAGAATTCCTTTTCTTGACATGGGGAA
 
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JMSF016M15+           TTAACTTCCGGAACCTTCTCTTCCAACTCCGGCAATGGGTCAATTGGACCTCGGAACCAC
JMSF002I12+                                   AACTCCGGCAATGGGTCAATTGGACCTCGGAACCAC
                      ____________________________________________________________
consensus             TTAACTTCCGGAACCTTCTCTTCCAACTCCGGCAATGGGTCAATTGGACCTCGGAACCAC
 
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JMSF016M15+           TGAATGGCGATGACCCGCCAAGGAACAAGTAATTACCGGAAGTGGGTCGCTTCAGAGAGA
JMSF002I12+           TGAATGGCGATGACCCGCCAAGGAACAAGTAATTACCGGAAGTGGGTCGCTTCAGAGAGA
                      ____________________________________________________________
consensus             TGAATGGCGATGACCCGCCAAGGAACAAGTAATTACCGGAAGTGGGTCGCTTCAGAGAGA
 
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JMSF016M15+           TGGGATTCGGGCAGAAGAGTATTGAAGTGCTCATTAAAAAAACGTACACAGCTCCACATT
JMSF002I12+           TGGGATTCGGGCAGAAGAGTATTGAAGTGCTCATTAAAAAAACGTACACAGCTCCACATT
                      ____________________________________________________________
consensus             TGGGATTCGGGCAGAAGAGTATTGAAGTGCTCATTAAAAAAACGTACACAGCTCCACATT
 
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JMSF016M15+           TTCCAGCATCCTCATCAGTGTTTTACAACAAAATTCAAGAAATGCATGCCGTTGGAACAG
JMSF002I12+           TTCCAGCATCCTCATCAGTGTTTTACAACAAAATTCAAGAAATGCATGCCGTTGGAACAG
                      ____________________________________________________________
consensus             TTCCAGCATCCTCATCAGTGTTTTACAACAAAATTCAAGAAATGCATGCCGTTGGAACAG
 
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JMSF016M15+           GACCAAATTTCGATTCAGTAGACTGCAGAGTGTGGGAGTTGGGTTCACGGTTTGGGCGCC
JMSF002I12+           GACCAAATTTCGATTCAGTAGACTGCAGAGTGTGGGAGTTGGGTTCACGGTTTGGGCGCC
                      ____________________________________________________________
consensus             GACCAAATTTCGATTCAGTAGACTGCAGAGTGTGGGAGTTGGGTTCACGGTTTGGGCGCC