Contig 010545:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005P11Sequence465010545 (18)dbj|BAD91202.1|9e-60mitochondrial F1-ATPase gamma subunit [Ipomoea nil]768010545 (18)dbj|BAD91202.1|3e-113mitochondrial F1-ATPase gamma subunit [Ipomoea nil]
JMFF010I21Sequence537010545 (18)dbj|BAD91202.1|3e-90mitochondrial F1-ATPase gamma subunit [Ipomoea nil]601010545 (18)dbj|BAD91202.1|4e-50mitochondrial F1-ATPase gamma subunit [Ipomoea nil]
JMFF036N02Sequence576010545 (18)dbj|BAD91202.1|1e-88mitochondrial F1-ATPase gamma subunit [Ipomoea nil]713010545 (18)dbj|BAD91202.1|7e-95mitochondrial F1-ATPase gamma subunit [Ipomoea nil]
JMFF040B09Sequence179010545 (18)ref|XP_006440754.1|2e-31hypothetical protein CICLE_v100211691mg, partial [Citrus clementina] ref|XP_0064
JMFN019L24Sequence605010545 (18)sp|P26360.2|ATPG3_IPOBA9e-123RecName: Full=ATP synthase subunit gamma, mitochondrial; AltName: Full=F-ATPase
JMFN020P19Sequence656010545 (18)dbj|BAF75379.1|1e-149gamma-subunit of the mitochondrial F1F0 ATP synthase [Ipomoea tricolor]
JMFS029C01Sequence620010545 (18)dbj|BAD91202.1|4e-112mitochondrial F1-ATPase gamma subunit [Ipomoea nil]
JMSF002C13Sequence333010545 (18)dbj|BAD91202.1|2e-26mitochondrial F1-ATPase gamma subunit [Ipomoea nil]715010545 (18)dbj|BAD91202.1|2e-96mitochondrial F1-ATPase gamma subunit [Ipomoea nil]
JMSF008K06Sequence414010545 (18)dbj|BAD91202.1|5e-47mitochondrial F1-ATPase gamma subunit [Ipomoea nil]784010545 (18)dbj|BAD91202.1|2e-108mitochondrial F1-ATPase gamma subunit [Ipomoea nil]
JMSF037P12Sequence670010545 (18)dbj|BAD91202.1|4e-124mitochondrial F1-ATPase gamma subunit [Ipomoea nil]669010545 (18)dbj|BAD91202.1|7e-63mitochondrial F1-ATPase gamma subunit [Ipomoea nil]
JMSF041J15Sequence806010545 (18)dbj|BAD91202.1|1e-159mitochondrial F1-ATPase gamma subunit [Ipomoea nil]559010545 (18)dbj|BAD91202.1|8e-60mitochondrial F1-ATPase gamma subunit [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF010I21- GGAGATCAGT
                      ____________________________________________________________
consensus GGAGATCAGT
 
. : . : . : . : . : . :
rJMFF010I21- ACCGGTTCACAAATGGATTATACGTTATCTTGGGGCAAAAAGAAAAGAAAAAAAATTCTT
rJMSF041J15- TGGGGNAAAAAGAAAAGAAAAAAAATTCTT
rJMSF002C13- TATCTTGGGGCAAAAAGAAAAGAAAAAAAATTCTT
rJMFF036N02- TATCTTGGGGCAAAAAGAAAAGAAAAAAAATTCTT
rJMSF037P12- TATCTTGGGGCAAAAAGAAAAGAAAAAAAATTCTT
rJMFF005P11- AATGGATTATACGTTATCTTGGGGCAAAAAGAAAAGAAAAAAAATTCTT
rJMSF008K06- TGGATTATACGTTATCTTGGGGCAAAAAGAAAAGAAAAAAAATTCTT
                      ____________________________________________________________
consensus ACCGGTTCACAAATGGATTATACGTTATCTTGGGGCAAAAAGAAAAGAAAAAAAATTCTT
 
. : . : . : . : . : . :
rJMFF010I21- AACTGCGTTACAGAACTCTGGCAAATACGAGAGATGGTAAACTGGGTTTCGCAAAGCTAT
rJMSF041J15- AACTGCGTTACAGAACTCTGGCAAATACGAGAGATGGTAAACTGGGTTTCGCAAAGCTAT
rJMSF002C13- AACTGCGTTACAGAACTCTGGCAAATACGAGAGATGGTAAACTGGGTTTCGCAAAGCTAT
rJMFF036N02- AACTGCGTTACAGAACTCTGGCAAATACGAGAGATGGTAAACTGGGTTTCGCAAAGCTAT
rJMSF037P12- AACTGCGTTACAGAACTCTGGCAAATACGAGAGATGGTAAACTGGGTTTCGCAAAGCTAT
rJMFF005P11- AACTGCGTTACAGAACTCTGGCAAATACGAGAGATGGTAAACTGGGTTTCGCAAAGCTAT
rJMSF008K06- AACTGCGTTACAGAACTCTGGCAAATACGAGAGATGGTAAACTGGGTTTCGCAAAGCTAT
                      ____________________________________________________________
consensus AACTGCGTTACAGAACTCTGGCAAATACGAGAGATGGTAAACTGGGTTTCGCAAAGCTAT
 
. : . : . : . : . : . :
rJMFF010I21- TTTTCAACCAGAACCAAATTTTCCCGAAATTATCCAGGAGATTATTAACGACCAACCAAA
rJMSF041J15- TTTTCAACCAGAACCAAATTTTCCCGAAATTATCCAGGAGATTATTAACGACCAACCAAA
rJMSF002C13- TTTTCAACCAGAACCAAATTTTCCCGAAATTATCCAGGAGATTATTAACGACCAACCAAA
rJMFF036N02- TTTTCAACCAGAACCAAATTTTCCCGAAATTATCCAGGAGATTATTAACGACCAACCAAA
rJMSF037P12- TTTTCAACCAGAACCAAATTTTCCCGAAATTATCCAGGAGATTATTAACGACCAACCAAA
rJMFF005P11- TTTTCAACCAGAACCAAATTTTCCCGAAATTATCCAGGAGATTATTAACGACCAACCAAA
rJMSF008K06- TTTTCAACCAGAACCAAATTTTCCCGAAATTATCCAGGAGATTATTAACGACCAACCAAA
                      ____________________________________________________________
consensus TTTTCAACCAGAACCAAATTTTCCCGAAATTATCCAGGAGATTATTAACGACCAACCAAA
 
. : . : . : . : . : . :
rJMFF010I21- AATCTCAGTATGTTGTAGGAGAACCAAGTGCAATAACAGCCTTCATAGAGTTTTATTTCA
rJMSF041J15- AATCTCAGTATGTTGTAGGAGAACCAAGTGCAATAACAGCCTTCATAGAGTTTTATTTCA
rJMSF002C13- AATCTCAGTATGTTGTAGGAGAACCAAGTGCAATAACAGCCTTCATAGAGTTTTATTTCA
rJMFF036N02- AATCTCAGTATGTTGTAGGAGAACCAAGTGCAATAACAGCCTTCATAGAGTTTTATTTCA
rJMSF037P12- AATCTCAGTATGTTGTAGGAGAACCAAGTGCAATAACAGCCTTCATAGAGTTTTATTTCA
rJMFF005P11- AATCTCAGTATGTTGTAGGAGAACCAAGTGCAATAACAGCCTTCATAGAGTTTTATTTCA
rJMSF008K06- AATCTCAGTATGTTGTAGGAGAACCAAGTGCAATAACAGCCTTCATAGAGTTTTATTTCA
                      ____________________________________________________________
consensus AATCTCAGTATGTTGTAGGAGAACCAAGTGCAATAACAGCCTTCATAGAGTTTTATTTCA
 
. : . : . : . : . : . :
rJMFF040B09- ATGCTGATGCTCCT
rJMFF010I21- TCACCATCAGAAATTATGAAGTAGCAGAGGTTTAATCAGCCCTCCAATGCTGATGCTCCT
rJMSF041J15- TCACCATCAGAAATTATGAAGTAGCAGAGGTTTAATCAGCCCTCCAATGCTGATGCTCCT
rJMSF002C13- TCACCATCAGAAATTATGAAGTAGCAGAGGTTTAATCAGCCCTCCAATGCTGATGCTCCT
rJMFF036N02- TCACCATCAGAAATTATGAAGTAGCAGAGGTTTAATCAGCCCTCCAATGCTGATGCTCCT
rJMSF037P12- TCACCATCAGAAATTATGAAGTAGCAGAGGTTTAATCAGCCCTCCAATGCTGATGCTCCT
rJMFF005P11- TCACCATCAGAAATTATGAAGTAGCAGAGGTTTAATCAGCCCTCCAATGCTGATGCTCCT
rJMSF008K06- TCACCATCAGAAATTATGAAGTAGCAGAGGTTTAATCAGCCCTCCAATGCTGATGCTCCT
                      ____________________________________________________________
consensus TCACCATCAGAAATTATGAAGTAGCAGAGGTTTAATCAGCCCTCCAATGCTGATGCTCCT
 
. : . : . : . : . : . :
rJMFF040B09- GATATGATCTCTGTCAGTTCTGTGGTGATANATGCTTGACGGGTTCTGTTGTAAGTGAGG
rJMFF010I21- GATATGATCTCTGTCAGTTCTGTGGTGATAGATGCTTGACGGGTTCTGTTGTAAGTGAGG
rJMSF041J15- GATATGATCTCTGTCAGTTCTGTGGTGATAGATGCTTGACGGGTTCTGTTGTAAGTGAGG
rJMSF002C13- GATATGATCTCTGTCAGTTCTGTGGTGATAGATGCTTGACGGGTTCTGTTGTAAGTGAGG
rJMFF036N02- GATATGATCTCTGTCAGTTCTGTGGTGATAGATGCTTGACGGGTTCTGTTGTAAGTGAGG
rJMSF037P12- GATATGATCTCTGTCAGTTCTGTGGTGATAGATGCTTGACGGGTTCTGTTGTAAGTGAGG
rJMFF005P11- GATATGATCTCTGTCAGTTCTGTGGTGATAGATGCTTGACGGGTTCTGTTGTAAGTGAGG
rJMSF008K06- GATATGATCTCTGTCAGTTCTGTGGTGATAGATGCTTGACGGGTTCTGTTGTAAGTGAGG
                      ____________________________________________________________
consensus GATATGATCTCTGTCAGTTCTGTGGTGATAGATGCTTGACGGGTTCTGTTGTAAGTGAGG
 
. : . : . : . : . : . :
rJMFF040B09- GTGAGGCGATCAAGCATTTCACCAGCATTCCTGCTGGAGCTGTCCATGGCAGACATCCTT
rJMFF010I21- GTGAGGCGATCAAGCATTTCACCAGCATTCCTGCTGGAGCTGTCCATGGCAGACATCCTT
rJMSF041J15- GTGAGGCGATCAAGCATTTCACCAGCATTCCTGCTGGAGCTGTCCATGGCAGACATCCTT
rJMSF002C13- GTGAGGCGATCAAGCATTTCACCAGCATTCCTGCTGGAGCTGTCCATGGCAGACATCCTT
rJMFF036N02- GTGAGGCGATCAAGCATTTCACCAGCATTCCTGCTGGAGCTGTCCATGGCAGACATCCTT
rJMSF037P12- GTGAGGCGATCAAGCATTTCACCAGCATTCCTGCTGGAGCTGTCCATGGCAGACATCCTT
rJMFF005P11- GTGAGGCGATCAAGCATTTCACCAGCATTCCTGCTGGAGCTGTCCATGGCAGACATCCTT
rJMSF008K06- GTGAGGCGATCAAGCATTTCACCAGCATTCCTGCTGGAGCTGTCCATGGCAGACATCCTT
JMFN020P19+ GTGAGCCGATCAAGCATTTCACCAGCATTTCTGCTGGAACTGTCCATGGCAGACATTCTG
                      ____________________________________________________________
consensus GTGAGGCGATCAAGCATTTCACCAGCATTCCTGCTGGAGCTGTCCATGGCAGACATCCTT
 
. : . : . : . : . : . :
rJMFF040B09- GCCCCTTGCTCACTGCAAGCATTCTCTAGAACAGCATTGAACATT
rJMFF010I21- GCCCCTTGCTCACTGCAAGCATTCTCTAGAACAGCATTGAACATTACACATGAAAATTGG
rJMSF041J15- GCCCCTTGCTCACTGCAAGCATTCTCTAGAACAGCATTGAACATTACACATGAAAATTGG
rJMSF002C13- GCCCCTTGCTCACTGCAAGCATTCTCTAGAACAGCATTGAACATTACACATGAAAATTGG
rJMFF036N02- GCCCCTTGCTCACTGCAAGCATTCTCTAGAACAGCATTGAACATTACACATGAAAATTGG
rJMSF037P12- GCCCCTTGCTCACTGCAAGCATTCTCTAGAACAGCATTGAACATTACACATGAAAATTGG
rJMFF005P11- GCCCCTTGCTCACTGCAAGCATTCTCTAGAACAGCATTGAACATTACACATGAAAATTGG
rJMSF008K06- GCCCCTTGCTCACTGCAAGCATTCTCTAGAACAGCATTGAACATTACACATGAAAATTGG
JMFN020P19+ CTCCCTTGCTCACTACAAGCATTCTCTAGTACAGAATTGAACATAATACATGAAAATTGG
                      ____________________________________________________________
consensus GCCCCTTGCTCACTGCAAGCATTCTCTAGAACAGCATTGAACATTACACATGAAAATTGG
 
. : . : . : . : . : . :
rJMFF010I21- AATTCAGTGAGATTCTGAAGTACTTCTGACTTTGACTCAGCACCTTCAATTTCATAAGGA
rJMSF041J15- AATTCAGTGAGATTCTGAAGTACTTCTGACTTTGACTCAGCACCTTCAATTTCATAA-GA
rJMSF002C13- AATTCAGTGAGATTCTGAAGTACTTCTGACTTTGACTCAGCACCTTCAATTTCATAA-GA
rJMFF036N02- AATTCAGTGAGATTCTGAAGTACTTCTGACTTTGACTCAGCACCTTCAATTTCATAA-GA
rJMSF037P12- AATTCAGTGAGATTCTGAAGTACTTCTGACTTTGACTCAGCACCTTCAATTTCATAA-GA
rJMFF005P11- AATTCAGTGAGATTCTGAAGTACTTCTGACTTTGACTCAGCACCTTCAATTTCATAA-GA
rJMSF008K06- AATTCAGTGAGATTCTGAAGTACTTCTGACTTTGACTCAGCACCTTCAATTTCATAA-GA
JMFN020P19+ AATTCAGAGAGATTCTGAAGGATTTCTGATTTTGACTCAGCACCTTCAATTTCATAA-GA
JMSF041J15+ ATTTCATAA-GA
                      ____________________________________________________________
consensus AATTCAGTGAGATTCTGAAGTACTTCTGACTTTGACTCAGCACCTTCAATTTCATAA-GA
 
. : . : . : . : . : . :
rJMFF010I21- ATCCAAATCGCCGAGCTTTCCCC
rJMSF041J15- ATCCAAATCGCCGAGCTTTCCCCCAGATTCAGA
rJMSF002C13- ATCCAAATCGCCGAGCTTTCCCCCAGATTCAGATTCTCTCTCCACAGCCTCAGGTGATAA
rJMFF036N02- ATCCAAATCGCCGAGCTTTCCCCCAGATTCAGATTCTCTCTCCACAGCCTCAGGTGATAA
rJMSF037P12- ATCCAAATCGCCGAGCTTTCCCCCAGATTCAGATTCTCTCTCCACAGCCT
rJMFF005P11- ATCCAAATCGCCGAGCTTTCCCCCAGATTCAGATTCTCTCTCCACAGCCTCAGGTGATAA
rJMSF008K06- ATCCAAATCGCCGAGCTTTCCCCCAGATTCAGATTCTCTCTCCACAGCCTCAGGTGATAA
JMFN020P19+ ATCCAAATCCCCAAGCTTCCCTCCAGATTCAGATTCTTTCTCCACAACCTCTGGGGATAA
JMSF041J15+ ATCCAAATCGCCGAGCTTTCCCCCAGATTCAGATTCTCTCTCCACAGCCTCAGGTGATAA
                      ____________________________________________________________
consensus ATCCAAATCGCCGAGCTTTCCCCCAGATTCAGATTCTCTCTCCACAGCCTCAGGTGATAA
 
. : . : . : . : . : . :
rJMSF002C13- TACAGTAGACATGGTTGGCACAAATGAGACAACTGACTGGAACTTGTTGAAAACAATTCT
rJMFF036N02- TACAGTAGACATGGTTGGCACAAATGAGACAACTGACTGGAACTTGTTGAAAACAATTCT
rJMFF005P11- TACAGTAGACATGGTTGGCACAAATGAGACAACTGACTGGAACTTGTTGAAAACAATTCT
rJMSF008K06- TACAGTAGACATGGTTGGCACAAATGAGACAACTGACTGGAACTTGTTGAAAACAATTCT
JMFN020P19+ TACAGTAGCCATTGTTGGCACAAATGAGACAACAGAGTGAAACTTGTTGAAAACAATTCT
JMFN019L24+ AACTTGTTGAAAACAATTCT
JMSF041J15+ TACAGTAGACATGGTTGGCACAAATGAGACAACTGACTGGAACTTGTTGAAAACAATTCT
                      ____________________________________________________________
consensus TACAGTAGACATGGTTGGCACAAATGAGACAACTGACTGGAACTTGTTGAAAACAATTCT
 
. : . : . : . : . : . :
rJMSF002C13- TAGAGCATCAAACTCTACATTTTTAAGGATGTCATCAGCAACCACTGAGACCTGAGTA
rJMFF036N02- CAGAGCATCAAACTCTACATTTTTAAGGATGTCATCAGCAACCACTGAGACC
rJMFF005P11- TAGAGCATCAAACTCTACATTTTTAAGGATGTCATCAGCAACCACTGAGACCTGAGTATA
rJMSF008K06- TAGAGCATCAAACTCTACATTTTTAAGGATGTCATCAGCAACCACTGAGACCTGAGTATA
JMFN020P19+ CAGAGCATCAAATTCAACATTTTTCAAGATGTCATCCGCGAGCACAGACACCTGTGTATA
JMSF037P12+ GAGCATCAAACTNTACATTTTTAAGGATGTCATCAGCAACCACTGAGACCTGAGTATA
JMFS029C01+ GAGTATA
JMFN019L24+ CAGAGCATCAAATTCAACATTTTTCAAGATGTCATCCGCGAGCACAGACACCTGTGTATA
JMSF041J15+ TAGAGCATCAAACTCTACATTTTTAAGGATGTCATCAGCAACCACTGAGACCTGAGTATA
                      ____________________________________________________________
consensus TAGAGCATCAAACTCTACATTTTTAAGGATGTCATCAGCAACCACTGAGACCTGAGTATA
 
. : . : . : . : . : . :
rJMFF005P11- GTTGAGAGGATTCTTCTGCAACTCAGTTATAATCAATTCAATGTCTTTCTTTGAATCTCG
rJMSF008K06- GTTGAGAGGATCCTTCTGCAACTCAGTTATAATCAATNCAATGTC-TTCTTTGAATCTCG
JMFN020P19+ GTTGAGTGGATTCTTCTGCAACTCAGTCATGATCAATTCAATGTCGTTCTTTGAATCTCG
JMSF037P12+ GTTGAGAGGATTCTTCTGCAACTCAGTTATAATCAATTCAATGTCTTTCTTTGAATCTCG
JMFS029C01+ GTTGAGAGGATTCTTCTGCAACTCAGTTATAATCAATTCAATGTCTTTCTTTGAATCTCG
JMFN019L24+ GTTGAGTGGATTCTTCTGCAACTCAGTCATGATCAATTCAATGTCGTTCTTTGAATCTCG
JMSF041J15+ GTTGAGAGGATTCTTCTGCAACTCAGTTATAATCAATTCAATGTCTTTCTTTGAATCTCG
                      ____________________________________________________________
consensus GTTGAGAGGATTCTTCTGCAACTCAGTTATAATCAATTCAATGTCTTTCTTTGAATCTCG
 
. : . : . : . : . : . :
rJMSF008K06- CACCATCTGTGC
JMFN020P19+ AACCAGCTGAGCCTTTGCCTTTTCTCCAAGAATAACATACTTGTTCTCCTTTTCAGGACC
JMSF037P12+ CACCATCTGTGCCTTTGCCTTCTCTCCCAGAATTACATATTTGTTTTCCTTCTCAGGACC
JMFS029C01+ CACCATCTGTGCCTTTGCCTTCTCTCCCAGAATTACATATTTGTTTTCCTTCTCAGGACC
JMFF010I21+ CCTTCTCTCCCAGAATTACATATTTGTTTTCCTTCTCAGGACC
JMFN019L24+ AACCAGCTGAGCCTTTGCCTTTTCTCCAAGAATAACATACTTGTTCTCCTTTTCAGGACC
JMSF041J15+ CACCATCTGTGCCTTTGCCTTCTCTCCCAGAATTACATATTTGTTTTCCTTCTCAGGACC
JMFF036N02+ CTCCCAGAATTACATATTTGTTTTCCTTCTCAGGACC
                      ____________________________________________________________
consensus CACCATCTGTGCCTTTGCCTTCTCTCCCAGAATTACATATTTGTTTTCCTTCTCAGGACC
 
. : . : . : . : . : . :
JMFN020P19+ AGAATTCAACTTGTGAATATTCCTGCTTGTCTTGACAGCTGTAGAATTAATTCCACCACA
JMSF037P12+ AGAATTCAACTTGTTAATATTCCGGCTTGTCTTGACAGATGTAGAATTAATTCCACCACA
JMFS029C01+ AGAATTCAACTTGTTAATATTCCGGCTTGTCTTGACAGATGTAGAATTAATTCCACCACA
JMFF010I21+ AGAATTCAACTTGTTAATATTCCGGCTTGTCTTGACAGATGTAGAATTAATTCCACCACA
JMFN019L24+ AGAATTCAACTTGTGAATATTCCTGCTTGTCTTGACAGCTGTAGAATTAATTCCACCACA
JMSF041J15+ AGAATTCAACTTGTTAATATTCCGGCTTGTCTTGACAGATGTAGAATTAATTCCACCACA
JMFF036N02+ AGAATTCAACTTGTTAATATTCCGGCTTGTCTTGACAGATGTAGAATTAATTCCACCACA
                      ____________________________________________________________
consensus AGAATTCAACTTGTTAATATTCCGGCTTGTCTTGACAGATGTAGAATTAATTCCACCACA
 
. : . : . : . : . : . :
JMFN020P19+ AAGACCTTTGTCTGAAGAAATAGTCACAATGACATTCTTCTTCACATCGACACTTGGAGT
JMSF037P12+ AAGACCTTTGTCTGAAGAAATAGTAATGATGACATTCTTCTTTACATCAACACTTGGAGT
JMFS029C01+ AAGACCTTTGTCTGAAGAAATAGTAATGATGACATTCTTCTTTACATCAACACTTGGAGT
JMFF010I21+ AAGACCTTTGTCTGAAGAAATAGTAATGATGACATTCTTCTTTACATCAACACTTGGAGT
JMFN019L24+ AAGACCTTTGTCTGAAGAAATAGTCACAATGACATTCTTCTTCACATCGACACTTGGAGT
JMSF041J15+ AAGACCTTTGTCTGAAGAAATAGTAATGATGACATTCTTCTTTACATCAACACTTGGAGT
JMFF005P11+ AAGAAATAGTAATGATGACATTCTTCTTTACATCAACACTTGGAGT
JMFF036N02+ AAGACCTTTGTCTGAAGAAATAGTAATGATGACATTCTTCTTTACATCAACACTTGGAGT
                      ____________________________________________________________
consensus AAGACCTTTGTCTGAAGAAATAGTAATGATGACATTCTTCTTTACATCAACACTTGGAGT
 
. : . : . : . : . : . :
JMFN020P19+ GTCACCAAGGAGAGCAGTGAACGGCTGCCAGAGACCACGTGAATT
JMSF037P12+ GTCACCAAGGAGAGCAGTGAATGGCTGCCAGAGGCCACGTGAATTTTCAGTTCTAGTCTG
JMFS029C01+ GTCACCAAGGAGAGCAGTGAATGGCTGCCAGAGGCCACGTGAATTTTCAGTTCTAGTCTG
JMFF010I21+ GTCACCAAGGAGAGCAGTGAATGGCTGCCAGAGGCCACGTGAATTTTCAGTTCTAGTCTG
JMFN019L24+ GTCACCAAGGAGAGCAGTGAACGGCTGCCAGAGACCACGTGAATTTTCAGCTCTAGTTTG
JMSF041J15+ GTCACCAAGGAGAGCAGTGAACGGCTGCCAGAGGCCACGTGAATTTTCAGTTCTAGTCTG
JMFF005P11+ GTCACCAAGGAGAGCAGTGAATGGCTGCCAGAGGCCACGTGAATTTTCAGTTCTAGTCTG
JMFF036N02+ GTCACCAAGGAGAGCAGTGAATGGCTGCCAGAGGCCACGTGAATTTTCAGTTCTAGTCTG
JMSF008K06+ AAGGAGAGCAGTGAATGGCTGCCAGAGGCCACGTGAATTTTCAGTTCTAGTCTG
                      ____________________________________________________________
consensus GTCACCAAGGAGAGCAGTGAATGGCTGCCAGAGGCCACGTGAATTTTCAGTTCTAGTCTG
 
. : . : . : . : . : . :
JMSF037P12+ AATAGCTCGAAGCTTAGAAGCTGCAACCATCTTCATTGCCTTTGTGATTTTTTGAATGTT
JMFS029C01+ AATAGCTCGAAGCTTAGAAGCTGCAACCATCTTCATTGCCTTTGTGATTTTTTGAATGTT
JMFF010I21+ AATAGCTCGAAGCTTAGAAGCTGCAACCATCTTCATTGCCTTTGTGATTTTTTGAATGTT
JMFN019L24+ AATTGCTCGGAGCTTGGAAGCTGCAACCATCTTCATGGCCTTAGTAATTTTTTGAATGTT
JMSF041J15+ AATAGCTCGAAGCTTAGAAGCTGCAACCATCTTCATTGCCTTTGTGATTTTTTGAATGTT
JMFF005P11+ AATAGCTCGAAGCTTAGAAGCTGCAACCATCTTCATTGCCTTTGTGATTTTTTGAATGTT
JMFF036N02+ AATAGCTCGAAGCTTAGAAGCTGCAACCATCTTCATTGCCTTTGTGATTTTTTGAATGTT
JMSF008K06+ AATAGCTCGAAGCTTAGAAGCTGCAACCATCTTCATTGCCTTTGTGATTTTTTGAATGTT
JMSF002C13+ CATCTTCATTGCCTTTGTGATTTTTTGAATGTT
                      ____________________________________________________________
consensus AATAGCTCGAAGCTTAGAAGCTGCAACCATCTTCATTGCCTTTGTGATTTTTTGAATGTT
 
. : . : . : . : . : . :
JMSF037P12+ TTTAACACTCTTCATCCGATTCCTCACAACTTGAGTAGAAATAAAACGGACTCCAGATGA
JMFS029C01+ TTTAACACTCTTCATCCGATTCCTCACAACTTGAGTAGAAATAAAACGGACTCCAGATGA
JMFF010I21+ TTTAACACTCTTCATCCGATTCCTCACAACTTGAGTAGAAATAAAACGGACTCCAGATGA
JMFN019L24+ TCTAACACTCTTCATGCGGTTTCTCACAACTTGAGTTGAAATATAGCGAACTCCTGATGA
JMSF041J15+ TTTAACACTCTTCATCCGATTCCTCACAACTTGAGTAGAAATAAAACGGACTCCAGATGA
JMFF005P11+ TTTAACACTCTTCATCCGATTCCTCACAACTTGAGTAGAAATAAAACGGACTCCAGATGA
JMFF036N02+ TTTAACACTCTTCATCCGATTCCTCACAACTTGAGTAGAAATAAAACGGACTCCAGATGA
JMSF008K06+ TTTAACACTCTTCATCCGATTCCTCACAACTTGAGTAGAAATAAAACGGACTCCAGATGA
JMSF002C13+ TTTAACACTCTTCATCCGATTCCTCACAACTTGAGTAGAAATAAAACGGACTCCAGATGA
                      ____________________________________________________________
consensus TTTAACACTCTTCATCCGATTCCTCACAACTTGAGTAGAAATAAAACGGACTCCAGATGA
 
. : . : . : . : . : . :
JMSF037P12+ GCCTATCTCCTCCGAAGGAGAGACAAGAGAGGAGCGGAGCGCATTGAGAGGGGTGGGAGA
JMFS029C01+ GCCTATCTCCTCCGAAGGAGAGACAAGAGAGGAGCGGAGCGCATTGAGAGGGGTGGGAGA
JMFF010I21+ GCCTATCTCCTCCGAAGGAGAGACAAGAGAGGAGCGGAGCGCATTGAGAGGGGTGGGAGA
JMFN019L24+ TCCTATCTCCTCGGAAGGAGA
JMSF041J15+ GCCTATCTCCTCCGAAGGAGAGACAAGAGAGGAGCGGAGCGCATTGAGAGGGGTGGGAGA
JMFF005P11+ GCCTATCTCCTCCGAAGGAGAGACAAGAGAGGAGCGGAGCGCATTGAGAGGGGTGGGAGA
JMFF036N02+ GCCTATCTCCTCCGAAGGAGAGACAAGAGAGGAGCGGAGCGCATTGAGAGGGGTGGGAGA
JMSF008K06+ GCCTATCTCCTCCGAAGGAGAGACAAGAGAGGAGCGGAGCGCATTGAGAGGGGTGGGAGA
JMSF002C13+ GCCTATCTCCTCCGAAGGAGAGACAAGAGAGGAGCGGAGCGCATTGAGAGGGGTGGGAGA
                      ____________________________________________________________
consensus GCCTATCTCCTCCGAAGGAGAGACAAGAGAGGAGCGGAGCGCATTGAGAGGGGTGGGAGA
 
. : . : . : . : . : . :
JMSF037P12+ AGTCAACGGAGCGGCGGCCAAACGCCTCCCCTCGCGTCTCAAAGCAGCCATCGCCATCTT
JMFS029C01+ AGTCAACGGAGCGGCGGCCAAACGCCTCCCCTCGCGTCTCAAAGCAGCCATCGCCATCTT
JMFF010I21+ AGTCAACGGAGCGGCGGCCAAACGCCTCCCCTCGCGTCTCAAAGCAGCCATCGCCATCTT
JMSF041J15+ AGTCAACGGAGCGGCGGCCAAACGCCTCCCCTCGCGTCTCAAAGCAGCCATCGCCATCTT
JMFF005P11+ AGTCAACGGAGCGGCGGCCAAACGCCTCCCCTCGCGTCTCAAAGCAGCCATCGCCATCTT
JMFF036N02+ AGTCAACGGAGCGGCGGCCAAACGCCTCCCCTCGCGTCTCAAAGCAGCCATCGCCATCTT
JMSF008K06+ AGTCAACGGAGCGGCGGCCAAACGCCTCCCCTCGCGTCTCAAAGCAGCCATCGCCATCTT
JMSF002C13+ AGTCAACGGAGCGGCGGCCAAACGCCTCCCCTCGCGTCTCAAAGCAGCCATCGCCATCTT
                      ____________________________________________________________
consensus AGTCAACGGAGCGGCGGCCAAACGCCTCCCCTCGCGTCTCAAAGCAGCCATCGCCATCTT
 
. : . : . : . : . : . :
JMSF037P12+ GATCTGATCGCTTCTTCTTCTTCTTCTTGCGGATCGGTGAGAAACTCGCTAGGGTTTGCT
JMFS029C01+ GATCTGATCGCTTCTTCTTCTTCTTCTTGCGGATCGGTGAGAAACTCGCTAGGGTTTGCT
JMFF010I21+ GATCTGATCGCTTCTTCTTCTTCTTCTTGCGGATCGGTGAGAAACTCGCTAGGGTTTGCT
JMSF041J15+ GATCTGATCGCTTCTTCTTCTTCTTCTTGCGGATCGGTGAGAAACTCGCTAGGGTTTGCT
JMFF005P11+ GATCTGATCGCTTCTTCTTCTTCTTCTTGCGGATCGGTGAGAAACTCGCTAGGGTTTGCT
JMFF036N02+ GATCTGATCGCTTCTTCTTCTTCTTCTTGCGGATCGGTGAGAAACTCGCTAGGGTTTGCT
JMSF008K06+ GATCTGATCGCTTCTTCTTCTTCTTCTTGCGGATCGGTGAGAAACTCGCTAGGGTTTGCT
JMSF002C13+ GATCTGATCGCTTCTTCTTCTTCTTCTTGCGGATCGGTGAGAAACTCGCTAGGGTTTGCT
                      ____________________________________________________________
consensus GATCTGATCGCTTCTTCTTCTTCTTCTTGCGGATCGGTGAGAAACTCGCTAGGGTTTGCT
 
. : . : . : . : . : . :
JMSF037P12+ CTTAACGGCTT
JMFS029C01+ CTTAACGGCTTGA
JMFF010I21+ CTTAACGGCTTGAT
JMSF041J15+ CTTAACGGCTTGAT
JMFF005P11+ CTTAACGGCTTGATGGGAGCTGTATACCAGTGTGGTTGCTGGGCATTTAGCGAGAATA
JMFF036N02+ CTTAACGGCTTGATGGGAGCTGTATACCAGTGTGGTTGCTGGGCATTTAGCGAGAATA
JMSF008K06+ CTTAACGGCTTGATGGGAGCTGTATACCAGTGTGGTTGCTGGGCATTTAGCGAGAATA
JMSF002C13+ CTTAACGGCTTGATGGGAGCTGTATACCAGTGTGGTTGCTGGGCATTTAGCGAGAATACC
                      ____________________________________________________________
consensus CTTAACGGCTTGATGGGAGCTGTATACCAGTGTGGTTGCTGGGCATTTAGCGAGAATACC