| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS090H03 | Sequence | 608 | 010530 (4) | ref|XP_009789214.1| | 8e-59 | PREDICTED: uncharacterized protein LOC104236874 isoform X1 [Nicotiana sylvestri | |||||
| JMFS161H06 | Sequence | 463 | 010530 (4) | ref|XP_009789215.1| | 1e-12 | PREDICTED: uncharacterized protein LOC104236874 isoform X2 [Nicotiana sylvestri | |||||
| JMSF029J23 | Sequence | 676 | 002301 (4) | ref|XP_009789214.1| | 8e-22 | PREDICTED: uncharacterized protein LOC104236874 isoform X1 [Nicotiana sylvestri | 743 | 010530 (4) | ref|XP_009605982.1| | 270 | PREDICTED: uncharacterized protein LOC104100459 [Nicotiana tomentosiformis] |
| JMSF035B11 | Sequence | 700 | 002301 (4) | ref|XP_009605982.1| | 144 | PREDICTED: uncharacterized protein LOC104100459 [Nicotiana tomentosiformis] | 749 | 010530 (4) | ref|XP_006353869.1| | 2e-83 | PREDICTED: uncharacterized protein LOC102602745 isoform X2 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS090H03- TCATCTTCAGATGGAGAC
____________________________________________________________
consensus TCATCTTCAGATGGAGAC
. : . : . : . : . : . :
JMFS090H03- CAAAGTCCCCTCTTCTTCTCTCCTGACAGGGTATACAAGACTGTTCCAGCCAGATAAACC
____________________________________________________________
consensus CAAAGTCCCCTCTTCTTCTCTCCTGACAGGGTATACAAGACTGTTCCAGCCAGATAAACC
. : . : . : . : . : . :
JMFS090H03- TGTGACAAAAGCTCAAGCTGCTATTGCCCTTGCAACTGGTGAGGCTTCTGACATTGTTGG
____________________________________________________________
consensus TGTGACAAAAGCTCAAGCTGCTATTGCCCTTGCAACTGGTGAGGCTTCTGACATTGTTGG
. : . : . : . : . : . :
JMFS090H03- TGAGGAGCTTGCACGTATCGAGGCTAAATCTATGGCTGAAAAAGCTGTCACTGCACATAA
____________________________________________________________
consensus TGAGGAGCTTGCACGTATCGAGGCTAAATCTATGGCTGAAAAAGCTGTCACTGCACATAA
. : . : . : . : . : . :
JMFS090H03- TGCTCTAATCGCTGAAGTGGAGAAAGATGTCAATGCAAGTTATGAAAAGGAACTCTCATT
____________________________________________________________
consensus TGCTCTAATCGCTGAAGTGGAGAAAGATGTCAATGCAAGTTATGAAAAGGAACTCTCATT
. : . : . : . : . : . :
JMFS090H03- GGAAAGAGAAAAGATTGATGCAGTGGAGAAATTGGCTGAGGAGGCAAGGTGAGAATTGGA
____________________________________________________________
consensus GGAAAGAGAAAAGATTGATGCAGTGGAGAAATTGGCTGAGGAGGCAAGGTGAGAATTGGA
. : . : . : . : . : . :
JMFS090H03- GAGGTTAACAGCTGAACGGGAGAAGAGAACCTTGCCTTACTGAAGGAGCGTGCTGCTGTT
____________________________________________________________
consensus GAGGTTAACAGCTGAACGGGAGAAGAGAACCTTGCCTTACTGAAGGAGCGTGCTGCTGTT
. : . : . : . : . : . :
JMFS090H03- GATTCAGAAATGGAAGTTCTTTCGAGGTTAAGGCGTGAGGTAGAGGAGCAGCTACAGACC
____________________________________________________________
consensus GATTCAGAAATGGAAGTTCTTTCGAGGTTAAGGCGTGAGGTAGAGGAGCAGCTACAGACC
. : . : . : . : . : . :
JMFS090H03- CTTATGAGTGTGAAGTTGGAGATTTCTTATGACAAAGAAAGGCTCAACAAGCTTCAGAAA
rJMSF029J23+ CAAGCTTCGGAAA
rJMSF035B11+ CAAGCTTCGGAAA
____________________________________________________________
consensus CTTATGAGTGTGAAGTTGGAGATTTCTTATGACAAAGAAAGGCTCAACAAGCTTCGGAAA
. : . : . : . : . : . :
JMFS090H03- GATGCTGAACTTGAAAATCAAGAGATAGCAAGGTTACAATATGAACTAGAGGTTGAGAGA
rJMSF029J23+ GATGCTGAACTTGAAAATCAAGAGATAGCAAGGTTACAATATGAACTAGAGGTTGAGAGA
rJMSF035B11+ GATGCTGAACTTGAAAATCNAGAGATAGCAAGGTTACAATATGAACTAGAGGTTGAGAGA
____________________________________________________________
consensus GATGCTGAACTTGAAAATCAAGAGATAGCAAGGTTACAATATGAACTAGAGGTTGAGAGA
. : . : . : . : . : . :
JMFS090H03- AAAGCACTGTCCATGGCTAGGGCTTGGGCTGAAGATGAGGTTAAAAGAGC
rJMSF029J23+ AAAGCACTGTCCATGGCTAGGGCTTGGGCTGAAGATGAGGCTAAAAGAGCTAGAGAGCAA
rJMSF035B11+ AAAGCACTGTCCATGGCTAGGGCTTGGGCTGAAGATGAGGCTAAAAGAGCTAGAGAGCAA
____________________________________________________________
consensus AAAGCACTGTCCATGGCTAGGGCTTGGGCTGAAGATGAGGCTAAAAGAGCTAGAGAGCAA
. : . : . : . : . : . :
rJMSF029J23+ GCAAAGGCCCTGGAGGAGGCAAGAGAACGCTGGGAGAAGCATGGTATCAAGGTTGTTGTT
rJMSF035B11+ GCAAAGGCCCTGGAGGAGGCAAGAGAACGCTGGGAGAAGCATGGTATCAAGGTTGTTGTT
____________________________________________________________
consensus GCAAAGGCCCTGGAGGAGGCAAGAGAACGCTGGGAGAAGCATGGTATCAAGGTTGTTGTT
. : . : . : . : . : . :
rJMSF029J23+ GATAATGACCTACAGGAAGAAGCAAATACTGGTGTCACATGGCTAAGTGCTGGAAAGCAG
rJMSF035B11+ GATAATGACCTACAGGAAGAAGCAAATACTGGTGTCACATGGCTAAGTGCTGGAAAGCAG
____________________________________________________________
consensus GATAATGACCTACAGGAAGAAGCAAATACTGGTGTCACATGGCTAAGTGCTGGAAAGCAG
. : . : . : . : . : . :
rJMSF029J23+ TTGTCAGTTGAAGGAAGCATATCTAGGGCAGAGAATTTGGTGGACAGATTGAGGGGAATG
rJMSF035B11+ TTGTCAGTTGAAGGAAGCATATCTAGGGCAGAGAATTTGGTGGACAGATTGAGGGGAATG
____________________________________________________________
consensus TTGTCAGTTGAAGGAAGCATATCTAGGGCAGAGAATTTGGTGGACAGATTGAGGGGAATG
. : . : . : . : . : . :
rJMSF029J23+ GCTGATGCTGTAAGAGGAAAATCAAAAGATACAATTCACAAAATAATGGAGAAGATACTT
rJMSF035B11+ GCTGATGCTGTAAGAGGAAAATCAAAAGATACAATTCACAAAATAATGGAGAAGATACTT
____________________________________________________________
consensus GCTGATGCTGTAAGAGGAAAATCAAAAGATACAATTCACAAAATAATGGAGAAGATACTT
. : . : . : . : . : . :
rJMSF029J23+ TTGTATATTTCCGTACTAAGGGAGTGGGCACAGAGAGGACGAAGGCGGGCAATAGTGTTA
rJMSF035B11+ TTGTATATTTCCGTACTAAGGGAGTGGGCACAGAGAGGACGAAGGCGGGCAATAGTGTTA
JMFS161H06+ AAGGGAGTGGGCACAGAGAGGACGAAGGCGGGCAATAGTGTTA
____________________________________________________________
consensus TTGTATATTTCCGTACTAAGGGAGTGGGCACAGAGAGGACGAAGGCGGGCAATAGTGTTA
. : . : . : . : . : . :
rJMSF029J23+ AAAGATACTGCCACATCAAAGATCAGTAACTCTTTTGAGTCTGTGAAGCACAGCTCTGCT
rJMSF035B11+ AAAGATACTGCCACATCAAAGATCAGTAACTCTTTTGAGTCTGTGAAGCACAGCTCTGCT
JMFS161H06+ AAAGATACTGCCACATCAAAGATCAGTAACTCTTTTGAGTCTGTGAAGCACAGCTCTGCT
____________________________________________________________
consensus AAAGATACTGCCACATCAAAGATCAGTAACTCTTTTGAGTCTGTGAAGCACAGCTCTGCT
. : . : . : . : . : . :
rJMSF029J23+ GAACTTGGGTCAGCTGTCGGAGAGAGAGTTAAGCGATTTGCTGTTGATAGCAGGGAAGGA
rJMSF035B11+ GAACTTGGGTCAGCTGTCGGAGAGAGAGTTAAGCGATTTGCTGTTGATAGCAGGGAAGGA
JMFS161H06+ GAACTTGGGTCAGCTGTCGGAGAGAGAGTTAAGCGATTTGCTGTTGATAGCAGGGAAGGA
____________________________________________________________
consensus GAACTTGGGTCAGCTGTCGGAGAGAGAGTTAAGCGATTTGCTGTTGATAGCAGGGAAGGA
. : . : . : . : . : . :
rJMSF029J23+ CTTGAGAAAATTTCTCAGAAATTCAGAACATAAGTCGCCATGCATCCTTGCAAACATCTC
rJMSF035B11+ CTTGAGAAAATTTCTCAGAAATTCAGAACATAAGTCGCCATGCATCCTTGCAAACATCTC
JMFS161H06+ CTTGAGAAAATTTCTCAGAAATTCAGAACATAAGTCGCCATGCATCCTTGCAAACATCTC
____________________________________________________________
consensus CTTGAGAAAATTTCTCAGAAATTCAGAACATAAGTCGCCATGCATCCTTGCAAACATCTC
. : . : . : . : . : . :
rJMSF029J23+ TTTTGTACTTTGGTTGGTGAGGAGCTGTAATTCCTCCCCGGCAATTTCCTTTGTACTCTT
rJMSF035B11+ TTTTGTACTTTGGTTGGTGAGGAGCTGTAATTCCTCCCCGGCAATTTCCTTTGTACTCTT
JMFS161H06+ TTTTGTACTTTGGTTGGTGAGGAGCTGTAATTCCTCCCCGGCAATTTCCTTTGTACTCTT
____________________________________________________________
consensus TTTTGTACTTTGGTTGGTGAGGAGCTGTAATTCCTCCCCGGCAATTTCCTTTGTACTCTT
. : . : . : . : . : . :
rJMSF029J23+ GCAGTCTTGCTAATAAGAATATTCTTGCAGAGCTCTCATAATAAGCGAATTT
rJMSF035B11+ GCAGTCTTGCTAATAAGAATATTCTTGCAGAGCTCTCATAATAAGCGAATTT
JMFS161H06+ GCAGTCTTGCTAATAAGAATATTCTTGCAGAGCTCTCATAATAAGCGAATTTAGAATTTG
____________________________________________________________
consensus GCAGTCTTGCTAATAAGAATATTCTTGCAGAGCTCTCATAATAAGCGAATTTAGAATTTG
. : . : . : . : . : . :
JMFS161H06+ CAGTGAGGTTTTGGAATGGAAAGATTGCAGTGATATTTAGAACTGGAAGATTATTATTTC
____________________________________________________________
consensus CAGTGAGGTTTTGGAATGGAAAGATTGCAGTGATATTTAGAACTGGAAGATTATTATTTC
. : . : . : . : . : . :
JMFS161H06+ CGCTACTTGTTGATTGTGCTCXXXXXXXXXXXXXXXXXXXXXXXCTCAAGACTAGTTCTC
____________________________________________________________
consensus CGCTACTTGTTGATTGTGCTCNNNNNNNNNNNNNNNNNNNNNNNCTCAAGACTAGTTCTC