Contig 010529:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS161C06Sequence430010529 (3)dbj|BAQ15379.1|4e-79flavin-binding kelch repeat F-box protein [Ipomoea nil]
JMFS161F12Sequence463010529 (3)dbj|BAQ15379.1|3e-91flavin-binding kelch repeat F-box protein [Ipomoea nil]
JMSF004O19Sequence255010529 (3)dbj|BAQ15379.1|2e-30flavin-binding kelch repeat F-box protein [Ipomoea nil]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS161F12+              TCTTAACTTGTTCACTAATGGGGTACCGTCCTTCCTAAAGTTGAGAAGCTCACCTTG
JMFS161C06+                                                             GCTCACCTTG
                      ____________________________________________________________
consensus                TCTTAACTTGTTCACTAATGGGGTACCGTCCTTCCTAAAGTTGAGAAGCTCACCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS161F12+           GAACTCCACACCTTGTTCAATACATCTTCTGATCTCAGAAACAACAACAGGATCTACCAG
JMFS161C06+           GAACTCCACACCTTGTTCAATACATCTTCTGATCTCAGAAACAACAACAGGATCTACCAG
                      ____________________________________________________________
consensus             GAACTCCACACCTTGTTCAATACATCTTCTGATCTCAGAAACAACAACAGGATCTACCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS161F12+           AGGATGCCGTCTTTGAGCCCGGGGATCTCTATATTGTAAAAACCGACAATTGCGGCCGAG
JMFS161C06+           AGGATGCCGTCTTTGAGCCCGGGGATCTCTATATTGTAAAAACCGACAATTGCGGCCGAG
                      ____________________________________________________________
consensus             AGGATGCCGTCTTTGAGCCCGGGGATCTCTATATTGTAAAAACCGACAATTGCGGCCGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS161F12+           GATTTCGTCAGCGCGATAGCCGGTGGAGATTTCGAAGACGGTGTTGACGTAGATGATGGG
JMSF004O19+                                                      TTGACGTAGATGATGGG
JMFS161C06+           GATTTCGTCAGCGCGATAGCCGGTGGAGATTTCGAAGACGGTGTTGACGTAGATGATGGG
                      ____________________________________________________________
consensus             GATTTCGTCAGCGCGATAGCCGGTGGAGATTTCGAAGACGGTGTTGACGTAGATGATGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS161F12+           TAGGTCGGGATCCAAGGCGTCGGAGACGACGATCGAAGACGGCGTGGCAAGCATCGGGTA
JMSF004O19+           TAGGTCGGGATCCANGGCGTCGGAGACGACGATCGAAGACGGCGTGGCAAGCATCGGGTA
JMFS161C06+           TAGGTCGGGATCCAAGGCGTCGGAGACGACGATCGAAGACGGCGTGGCAAGCATCGGGTA
                      ____________________________________________________________
consensus             TAGGTCGGGATCCAAGGCGTCGGAGACGACGATCGAAGACGGCGTGGCAAGCATCGGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS161F12+           TAAGAAAAACCCACCACCATGCTCTCTCAGTTTCTGCCTATCTTCTTTTTCCCCTTCCGC
JMSF004O19+           TAAGAAAAACCCACCACCATGCTCTCTCAGTTTCTGCCTATNTTCTTTTTCCCCNTCCGC
JMFS161C06+           TAAGAAAAACCCACCACCATGCTCTCTCAGTTTCTGCCTATCTTCTTTTTCCCCTTCCGC
                      ____________________________________________________________
consensus             TAAGAAAAACCCACCACCATGCTCTCTCAGTTTCTGCCTATCTTCTTTTTCCCCTTCCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS161F12+           TTCGTCTTCTACCATCCTGTCATTCCCAGCGAATTTCAGCCTCTTCCCTCGGTTCCAAAG
JMSF004O19+           TTCGTNTTNTACCATCCTGTCATTCCCAGNGAATTTCAGCCTCTTCCCTCGGTTCCAAAG
JMFS161C06+           TTCGTCTTCTACCATCCTGTCATTCCCAGCGAATTTCAGCCTCTTCCCTCGGTTCCAAAG
                      ____________________________________________________________
consensus             TTCGTCTTCTACCATCCTGTCATTCCCAGCGAATTTCAGCCTCTTCCCTCGGTTCCAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS161F12+           CTCCTCCTCTTCTTCGCTTTCTTCCATCTCTCTCTCTCTCTCTCTC              
JMSF004O19+           CTCCTCCTCTTCTTCGCTTTCTTCCATCTCTCTCTCTCTCTCTCTCTC            
JMFS161C06+           CTCCTCCTCTTCTTCGCTTTCTTCCATCTCTCTCTCTCTCTCTCTCTCCCTCGTGCCGAA
                      ____________________________________________________________
consensus             CTCCTCCTCTTCTTCGCTTTCTTCCATCTCTCTCTCTCTCTCTCTCTCCCTCGTGCCGAA