Contig 010519:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019I21Sequence600010519 (11)emb|CDP16685.1|3e-50unnamed protein product [Coffea canephora]628001870 (9)ref|XP_009596046.1|5e-74PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis]
JMFF041D07Sequence658010519 (11)emb|CDP16685.1|2e-66unnamed protein product [Coffea canephora]476001870 (9)ref|XP_006357190.1|1e-37PREDICTED: chloride channel protein CLC-b-like [Solanum tuberosum]
JMFF045J08Sequence667010519 (11)emb|CDP16685.1|1e-52unnamed protein product [Coffea canephora]
JMFF050I04Sequence590010519 (11)ref|XP_011097296.1|2e-34PREDICTED: chloride channel protein CLC-b-like [Sesamum indicum]566001870 (9)ref|XP_009761471.1|5e-46PREDICTED: chloride channel protein CLC-b-like [Nicotiana sylvestris]
JMFS012A07Sequence618010519 (11)emb|CDP16685.1|2e-61unnamed protein product [Coffea canephora]
JMFS086G03Sequence644010519 (11)emb|CDP16685.1|4e-42unnamed protein product [Coffea canephora]
JMFS091B02Sequence626010519 (11)emb|CDP16685.1|6e-53unnamed protein product [Coffea canephora]
JMFS145H05Sequence631010519 (11)emb|CDP16685.1|1e-35unnamed protein product [Coffea canephora]
JMFS147F05Sequence632010519 (11)emb|CDP16685.1|1e-58unnamed protein product [Coffea canephora]
JMSF020G03Sequence713010519 (11)emb|CDP16685.1|5e-76unnamed protein product [Coffea canephora]768001870 (9)gb|AAD29679.1|AF133209_13e-119CLC-Nt2 protein [Nicotiana tabacum]
JMSF052B13Sequence693010519 (11)emb|CDP16685.1|2e-86unnamed protein product [Coffea canephora]824001870 (9)gb|AAD29679.1|AF133209_12e-120CLC-Nt2 protein [Nicotiana tabacum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+                                                         CTGATACAGCTCCA
                      ____________________________________________________________
consensus                                                           CTGATACAGCTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           ATGCTTCCAATGATCTTGACAATCAGTGTTGTGGCACCAAACATATTGGGAGTGTCTATT
JMSF020G03+                                               CCAAACATATTGGGAGTGTCTATT
                      ____________________________________________________________
consensus             ATGCTTCCAATGATCTTGACAATCAGTGTTGTGGCACCAAACATATTGGGAGTGTCTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           CCATTGAGATATGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAAAAAAG
JMFS012A07+                                           GGGGCCTGCGGCGGTAGGTGCAANAAAG
JMFF041D07+                      TGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAANAAAG
JMFF045J08+              TTGAGATATGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAAAAAGA
JMFS147F05+                                                         TAGGTGCAAAAAAG
JMSF020G03+           CCATTGAGATATGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAAAAAAG
                      ____________________________________________________________
consensus             CCATTGAGATATGCTTTGATTTCAGGTATTCCGGGGCCTGCGGCGGTAGGTGCAAAAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFS012A07+           ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFF041D07+           ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFF045J08+           CCACACAGAAACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFS091B02+                 AG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFS147F05+           ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFF019I21+                                       AGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMSF020G03+           ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
JMFF050I04+                                                     CCCAACAAAATATGCAAA
                      ____________________________________________________________
consensus             ACACACAG-AACAGAAGCACTCATTGTGAGAAGAAAATTGGTCCCAACAAAATATGCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFS012A07+           ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFF041D07+           ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFF045J08+           ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFS091B02+           ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFS147F05+           ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFS086G03+                      ACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFF019I21+           ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMSF020G03+           ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
JMFF050I04+           ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
                      ____________________________________________________________
consensus             ACCCATAAGGTACCTGTTGTTGTCGATGTAGTTGAGCACTGCAAGAAGTTTGTAGCCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFS012A07+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFF041D07+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFF045J08+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFS091B02+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFS147F05+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFS086G03+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFF019I21+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMSF020G03+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
JMFF050I04+           AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
                      ____________________________________________________________
consensus             AATGTTTTCGATTGCGAGATTTATGAGGGTGGCTATTAATCCAGTTAGAAGCCCAATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFS012A07+           GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFF041D07+           GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFF045J08+           GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFS091B02+           GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFS147F05+           GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFS086G03+           GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFF019I21+           GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMSF020G03+           GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
JMFF050I04+           GAACGCCAGTGTCCA-TTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
                      ____________________________________________________________
consensus             GAACGCCAGTGTCCATTTTAGGAAAACATATTGCAAAACATGAGATTTTGATCTACTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS012A07+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFF041D07+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFF045J08+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS091B02+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS147F05+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS086G03+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFF019I21+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMSF020G03+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFF050I04+           CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
JMFS145H05+                                            CTCGTAATCCAGACTCTCTATGGGAGA
                      ____________________________________________________________
consensus             CCAGTCGTGTTTGAACAGATCATTCTCATTGATCTCGTAATCCAGACTCTCTATGGGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS012A07+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFF041D07+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFF045J08+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS091B02+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS147F05+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS086G03+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFF019I21+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMSF020G03+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFF050I04+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
JMFS145H05+           AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
                      ____________________________________________________________
consensus             AACCTTAGCTCCAATCATGGCTACCGGAGTGGAGGAAAGTGTGCGGTTTCTCTTGAGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS012A07+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFF041D07+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFF045J08+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS091B02+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS147F05+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS086G03+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFF019I21+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMSF020G03+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFF050I04+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
JMFS145H05+           AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
                      ____________________________________________________________
consensus             AGGTCGATGCAGCGAGTTGCTCTCTGGGTCGTCATCTGCCTGCCCCTCCATCTCGTTAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS012A07+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFF041D07+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFF045J08+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS091B02+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS147F05+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS086G03+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFF019I21+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMSF020G03+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFF050I04+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
JMFS145H05+           GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
                      ____________________________________________________________
consensus             GCTTCCTGCTCCTGCAAATTCCATGCTCATACAGAAGCCAAGCTAGCTAGCTAGCTAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS012A07+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFF041D07+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFF045J08+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS091B02+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS147F05+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS086G03+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFF019I21+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMSF020G03+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFF050I04+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
JMFS145H05+           TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
                      ____________________________________________________________
consensus             TCGATTAGCTTGATATGATCGAGTGTTAAGGGTCCACATCCATGTGTTGGGAATGGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B13+           AGAATCAATATATGTAG                                           
JMFS012A07+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAA         
JMFF041D07+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFF045J08+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFS091B02+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGGAAACATAAATCT
JMFS147F05+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFS086G03+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFF019I21+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMSF020G03+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFF050I04+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
JMFS145H05+           AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
                      ____________________________________________________________
consensus             AGAATCAATATATGTAGACAAGTAATTGGAAGAATAGAATGCTGGGGAAAACATAAATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041D07+           CGCCCAGAAT                                                  
JMFF045J08+           CGCCCAGAAT                                                  
JMFS091B02+           CGCCCAGAATAAAAAAA                                           
JMFS147F05+           CGCCCAGAATAAAAAAAAT                                         
JMFS086G03+           CGCCCAGAATAAAAAAA                                           
JMFF019I21+           CGCCCAGAATAAAAAAAATAAAAAATGC                                
JMSF020G03+           CGCCCAGAATAAAAAAAATAAAAAATGC                                
JMFF050I04+           CGCCCAGAATAAAAAAAATAAAAAATGC                                
JMFS145H05+           CGCCCAGAATAAAAAAAATAAAAAATGCAGGCAGGCAGGGATGATAACTTCTGGGAAATA
                      ____________________________________________________________
consensus             CGCCCAGAATAAAAAAAATAAAAAATGCAGGCAGGCAGGGATGATAACTTCTGGGAAATA