Contig 010480:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050F11+                                    ATCAGCAACAACATTTGACCTAGGTGGAGCATTAC
                      ____________________________________________________________
consensus                                      ATCAGCAACAACATTTGACCTAGGTGGAGCATTAC
 
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JMSF050F11+           TAGGTGGTCTTTTCTCAGCTACAGATGTTTGTTTCTTCTGAGACGACGAGGTTTGGGTGG
                      ____________________________________________________________
consensus             TAGGTGGTCTTTTCTCAGCTACAGATGTTTGTTTCTTCTGAGACGACGAGGTTTGGGTGG
 
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JMSF050F11+           TTGGGGGCGACGATTTGGACTTGTTTACGGGATTATGTGACTTAACAGACTTCTGAAACA
                      ____________________________________________________________
consensus             TTGGGGGCGACGATTTGGACTTGTTTACGGGATTATGTGACTTAACAGACTTCTGAAACA
 
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JMSF050F11+           CTACGGGTGAGGGACAACACCAGAACCCCTCTGGGGTAACAGCAATTGGAACATTCTTAA
                      ____________________________________________________________
consensus             CTACGGGTGAGGGACAACACCAGAACCCCTCTGGGGTAACAGCAATTGGAACATTCTTAA
 
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JMSF050F11+           CCTTGGTTTGACCCTGCTCTACCTTGGTAAGTCTAATTTCAGCCATATTCAACACACAAC
                      ____________________________________________________________
consensus             CCTTGGTTTGACCCTGCTCTACCTTGGTAAGTCTAATTTCAGCCATATTCAACACACAAC
 
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JMSF050F11+           AGAAAACTTCAAAGGATAATTAATTCAAGAAATGGCATTTTCTGTAGAAACAAGAAAGTG
                      ____________________________________________________________
consensus             AGAAAACTTCAAAGGATAATTAATTCAAGAAATGGCATTTTCTGTAGAAACAAGAAAGTG
 
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JMSF050F11+           GACCCAAAAAGCTAACAACATTCAAATCCACAACCTACAAAGGTCTCATCTTTTTCAGTA
                      ____________________________________________________________
consensus             GACCCAAAAAGCTAACAACATTCAAATCCACAACCTACAAAGGTCTCATCTTTTTCAGTA
 
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JMSF050F11+           TGATGAACACAAACCCTAGAATTCAGGAGCTTTATCAACCTATGCAAACATTCTATGGCT
                      ____________________________________________________________
consensus             TGATGAACACAAACCCTAGAATTCAGGAGCTTTATCAACCTATGCAAACATTCTATGGCT
 
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JMSF050F11+           TAATTGTACCTCAGGAGAGAACAGACATTCCAAGAATTCAAAACAAAACCTTAA-TTTCT
JMSF004A03+                      CAGGAGAGAACAGACATTCCAAGAATTCAAAACAAAACCTTAATTTTCT
JMSF012F01+                                                                    TCT
                      ____________________________________________________________
consensus             TAATTGTACCTCAGGAGAGAACAGACATTCCAAGAATTCAAAACAAAACCTTAATTTTCT
 
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JMSF050F11+           GCACTATATTCTTCAAACAAACGAAAATAAAGAAAAAAACAAATAAGCACAGAGAAGCAG
JMSF004A03+           GCACTATATTCTTCAAACAAACGAAAATAAAGAAAAAAACAAATAAGCACAGAGAAGCAG
JMSF012F01+           GCACTATATTCTTCAAACAAACGAAAATAAAGAAAAAAACAAATAAGCACAGAGAAGCAG
JMFS098F10+                                                             AGAGAAGCAG
                      ____________________________________________________________
consensus             GCACTATATTCTTCAAACAAACGAAAATAAAGAAAAAAACAAATAAGCACAGAGAAGCAG
 
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JMSF050F11+           AAAGGGCAAATTTCAATTCTTGAACCTGCAGAGACCTTGTTTCAGTTAGGGCTAACAAAT
JMSF004A03+           AAAGGGCAAATTTCAATTCTTGAACCTGCAGAGACCTTGTTTCAGTTAGGGCTAACAAAT
JMSF012F01+           AAAGGGCAAATTTCAATTCTTGAACCTGCAGAGACCTTGTTTCAGTTAGGGCTAACAAAT
JMFS098F10+           AAAGGGCAAATTTCAATTCTTGAACCTGCAGAGACCTTGTTTCAGTTAGGGCTAACAAAT
                      ____________________________________________________________
consensus             AAAGGGCAAATTTCAATTCTTGAACCTGCAGAGACCTTGTTTCAGTTAGGGCTAACAAAT
 
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JMSF050F11+           CTAGCCCT                                                    
JMSF004A03+           CTAGCCCTGAGGGGGTCCTAAATATGCATAAAAGGGGAAACTTTAAATACCCAAGAAAAA
JMSF012F01+           CTAGCCCTGAGGGGGTCCTAAATATGCATAAAAGGGGAAACTTTAAATACCCAAGAAAAA
JMFS098F10+           CTAGCCCTGAGGGGGTCCTAAATATGCATAAAAGGGGAAACTTTAAATACCCAAGAAAAA
                      ____________________________________________________________
consensus             CTAGCCCTGAGGGGGTCCTAAATATGCATAAAAGGGGAAACTTTAAATACCCAAGAAAAA
 
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JMSF004A03+           GAATTTGCAGAAAGTGCAGAAACAGCAAACTAGCAAACACACACACACTCACCAACAACC
JMSF012F01+           GAATTTGCAGAAAGTGCAGAAACAGCAAACTAGCAAACACACACACACTCACCAACAACC
JMFS098F10+           GAATTTGCAGAAAGTGCAGAAACAGCAAACTAGCAAACACACACACACTCACCAACAACC
                      ____________________________________________________________
consensus             GAATTTGCAGAAAGTGCAGAAACAGCAAACTAGCAAACACACACACACTCACCAACAACC
 
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JMSF004A03+           AACAATGGCTATCTCTGATAAT                                      
JMSF012F01+           AACAATGGCTATCTCTGATAAT                                      
JMFS098F10+           AACAATGGCTATCTCTGATAATTCTCTGAAAACCCTTCAAAGCTCATAAATTTATGAGCC
                      ____________________________________________________________
consensus             AACAATGGCTATCTCTGATAATTCTCTGAAAACCCTTCAAAGCTCATAAATTTATGAGCC
 
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JMFS098F10+           TCTAAGAATGATTGAAGAGAGCTTTGATGTCAAGCATCAAGGGAACCACCAAAGAGAGAT
                      ____________________________________________________________
consensus             TCTAAGAATGATTGAAGAGAGCTTTGATGTCAAGCATCAAGGGAACCACCAAAGAGAGAT
 
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JMFS098F10+           TTAACAGACTGGAATGATGGGGTTTTTCTTATACCCTGTGGGAATTTTTATTTTTTTTGG
                      ____________________________________________________________
consensus             TTAACAGACTGGAATGATGGGGTTTTTCTTATACCCTGTGGGAATTTTTATTTTTTTTGG
 
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JMFS098F10+           TTTAAAAATCAAAAAATGGAACTGGGGGAATATTATAAATCAAGAAAACACATGACCCAA
                      ____________________________________________________________
consensus             TTTAAAAATCAAAAAATGGAACTGGGGGAATATTATAAATCAAGAAAACACATGACCCAA
 
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JMFS098F10+           AGTGAGAGTGATTGCTTATGGGCTGTACTTGCAACTTTACACTGTGTGTGTGGCCTCCTC
                      ____________________________________________________________
consensus             AGTGAGAGTGATTGCTTATGGGCTGTACTTGCAACTTTACACTGTGTGTGTGGCCTCCTC
 
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JMFS098F10+           CTCTTCCTCCGATAATGTTTTTGTGAGATTCTTATGATTTTGTTGGGGAGACTTTCACTG
                      ____________________________________________________________
consensus             CTCTTCCTCCGATAATGTTTTTGTGAGATTCTTATGATTTTGTTGGGGAGACTTTCACTG
 
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JMFS098F10+           TTCTTCCTGAAACCTCTCTATCTCATATACAGACAGAACAAACTACCTAAACATGTTAAG
                      ____________________________________________________________
consensus             TTCTTCCTGAAACCTCTCTATCTCATATACAGACAGAACAAACTACCTAAACATGTTAAG