Contig 010477:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034P13Sequence512007695 (18)ref|XP_009761607.1|1e-76PREDICTED: heat shock 70 kDa protein 15-like, partial [Nicotiana sylvestris]476010477 (4)ref|XP_009765555.1|2e-17PREDICTED: heat shock 70 kDa protein 15-like [Nicotiana sylvestris]
JMFS091C02Sequence254010477 (4)
JMSF021K01Sequence727007695 (18)ref|XP_007024113.1|3e-121Heat shock protein 91 isoform 2 [Theobroma cacao] gb|EOY26735.1| Heat shock prot732010477 (4)ref|XP_009765555.1|1e-40PREDICTED: heat shock 70 kDa protein 15-like [Nicotiana sylvestris]
JMSF040O05Sequence621007695 (18)ref|XP_009761607.1|1e-100PREDICTED: heat shock 70 kDa protein 15-like, partial [Nicotiana sylvestris]143010477 (4)

Alignment

This contig is upended


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rJMSF021K01+                                    GTCTANTGCATCAATAGTTACAGAGAGGCTGCAA
                      ____________________________________________________________
consensus                                       GTCTANTGCATCAATAGTTACAGAGAGGCTGCAA
 
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rJMSF021K01+          TGTCAAATGAAGCAAAGTTTGAGCATATTGAATTAGCAGACAAGCAGAAGGTCATGAATG
                      ____________________________________________________________
consensus             TGTCAAATGAAGCAAAGTTTGAGCATATTGAATTAGCAGACAAGCAGAAGGTCATGAATG
 
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rJMFF034P13+                      CTGAGGCTTGGTTGAGAGAGAAAAAGCAGCAGCAGGATGCGCTTCCAA
rJMSF021K01+          AGTGTGTTGAAGCTGAGGCTTGGTTGAGAGAGAAAAAGCAGCAGCAGGATGCGCTTCCAA
                      ____________________________________________________________
consensus             AGTGTGTTGAAGCTGAGGCTTGGTTGAGAGAGAAAAAGCAGCAGCAGGATGCGCTTCCAA
 
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rJMFF034P13+          AGTATGCCACACCTGTTCTTTTGTCTGCTGATATAAGAAAGAAGGCTGAAGCTGTTGATA
rJMSF021K01+          AGTATGCCACACCTGTTCTTTTGTCTGCTGATATAAGAAAGAAGGCTGAAGCTGTTGATA
                      ____________________________________________________________
consensus             AGTATGCCACACCTGTTCTTTTGTCTGCTGATATAAGAAAGAAGGCTGAAGCTGTTGATA
 
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rJMFF034P13+          GGATTTGCAGGCCTATAATGACGAAACCCAAGCCAGCCAAGC---CTACTACTACTGAAC
rJMSF021K01+          GGATTTGCAGGCCTATAATGACGAAACCCAAGCCAGCCAAGCCTACTACTACTACTGAAC
                      ____________________________________________________________
consensus             GGATTTGCAGGCCTATAATGACGAAACCCAAGCCAGCCAAGCCTACTACTACTACTGAAC
 
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rJMFF034P13+          CATCATCACCACAAACTTCCCAAAGCAGTGAGAAACATTCTCAAGGTGGAGAGGGCCCGA
rJMSF021K01+          CATCATCACCACAAACTTCCCAAAGCAGTGAGAAACATTCTCAAGGTGGAGAGGGCCCGA
                      ____________________________________________________________
consensus             CATCATCACCACAAACTTCCCAAAGCAGTGAGAAACATTCTCAAGGTGGAGAGGGCCCGA
 
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rJMFF034P13+          ACCCCAATGAAAATAGCAATGCGGGCGAGGGCGGATTCGAAGCAACTTCTGCCACTGAGC
rJMSF021K01+          ACCCCAATGAAAATAGCAATGCGGGCGAGGGCGGATTCGAAGCAACTTCTGCCACTGAGC
                      ____________________________________________________________
consensus             ACCCCAATGAAAATAGCAATGCGGGCGAGGGCGGATTCGAAGCAACTTCTGCCACTGAGC
 
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rJMFF034P13+          CAATGGAAACAGACAAGTCAGAATCGGAGTCTGCTCCTCCAAGTGGTGTTTAGGTTCAGT
rJMSF021K01+          CAATGGAAACAGACAAGTCAGAATCGGAGTCTGCTCCTCCAAGTGGTGTTTAGGTTCAGT
                      ____________________________________________________________
consensus             CAATGGAAACAGACAAGTCAGAATCGGAGTCTGCTCCTCCAAGTGGTGTTTAGGTTCAGT
 
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rJMFF034P13+          GGCCGGCTGCTTTGTTGTCTCTGATGCATTTTGCGATGATTCGGTTACTACTTGTACTCC
rJMSF021K01+          GGCCGGCTGCTTTGTTGTCTCTGATGCATTTTGCGATGATTCGGTTACTACTTGTACTCC
                      ____________________________________________________________
consensus             GGCCGGCTGCTTTGTTGTCTCTGATGCATTTTGCGATGATTCGGTTACTACTTGTACTCC
 
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rJMFF034P13+          TTCCCATTCGGTCCTGAACATTTTGATGAATCTATAGTTGGCGGTGGCCATATTATATAT
rJMSF040O05+                 TCGGTCCTGAACATTCTGANGAATCTATAGTTGNCGGTGNCCATATTANATAT
rJMSF021K01+          TTCCCATTCGGTCCTGAACATTTTGATGAATCTATAGTTGGCGGTGGCCATATTATATAT
JMFS091C02-                                                          CCATATTATATAT
                      ____________________________________________________________
consensus             TTCCCATTCGGTCCTGAACATTTTGATGAATCTATAGTTGGCGGTGGCCATATTATATAT
 
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rJMFF034P13+          TCACT                                                       
rJMSF040O05+          TCACNNGCAGAGTCTATCTNTCAANTTTGGATCATTATGTAAAAGGATTGGGAGCGTCCG
rJMSF021K01+          TCACTTGCAGAGTTTATATTTTAATTTTGGATTATTATGTAAAAGGATTGGGAGTGTCTG
JMFS091C02-           TCACTTGCAGAGTTTATATTTTAATTTTGGATTATTATGTAAAAGGATTGGGAGTGTCTG
                      ____________________________________________________________
consensus             TCACTTGCAGAGTTTATATTTTAATTTTGGATTATTATGTAAAAGGATTGGGAGTGTCTG
 
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rJMSF040O05+          ATTAACTGTTNATCATCATTAGGGTGG                                 
rJMSF021K01+          ATTAACTGTTTATCATCATTAGGGTGGTGGCTCATTAGACTAGAATCCTGTTCTTCCAAG
JMFS091C02-           ATTAACTGTTTATCATCATTAGGGTGGTGGCTCATTAGACTAGAATCCTGTTCTTCCAAG
                      ____________________________________________________________
consensus             ATTAACTGTTTATCATCATTAGGGTGGTGGCTCATTAGACTAGAATCCTGTTCTTCCAAG
 
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rJMSF021K01+          GGATTTGCAAGTTTGGGTTCTACTATTGTTTTTTCCAT                      
JMFS091C02-           GGATTTGCAAGTTTGGGTTCTACTATTGTTTTTTCCATGTTTCCCGTCACAGGGAAAAAG
                      ____________________________________________________________
consensus             GGATTTGCAAGTTTGGGTTCTACTATTGTTTTTTCCATGTTTCCCGTCACAGGGAAAAAG
 
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JMFS091C02-           ATGAATTTCAAAATGTTTACGATTTCTCACGAATCTCAATCTGTTTTTTAAAGATCCATT
                      ____________________________________________________________
consensus             ATGAATTTCAAAATGTTTACGATTTCTCACGAATCTCAATCTGTTTTTTAAAGATCCATT