Contig 010476:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS019F04Sequence564010476 (2)ref|XP_006357639.1|1e-14PREDICTED: phytochrome C-like isoform X1 [Solanum tuberosum]
JMFS088H08Sequence636010476 (2)ref|XP_006357639.1|3e-15PREDICTED: phytochrome C-like isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS019F04+ GAATAATCAAACTGTTCCTCAGACTCCTC
JMFS088H08+ AGAGGTAGAATAATCAAACTGTTCCTCAGACTCCTC
                      ____________________________________________________________
consensus AGAGGTAGAATAATCAAACTGTTCCTCAGACTCCTC
 
. : . : . : . : . : . :
JMFS019F04+ AAACTCCACATGGAGCTTAGCATCAATAGATGTCTGAGCAACAACGCGAGCATCATGCCT
JMFS088H08+ AAACTCCACATGGAGCTTAGCATCAATAGATGTCTGAGCAACAACGCGAGCATCATGCCT
                      ____________________________________________________________
consensus AAACTCCACATGGAGCTTAGCATCAATAGATGTCTGAGCAACAACGCGAGCATCATGCCT
 
. : . : . : . : . : . :
JMFS019F04+ CGACCGAGCAGAGCTGCTCATGGAGCAGTTTGTCCTGATTGTACCCGATCTAGATGACAT
JMFS088H08+ CGACCGAGCAGAGCTGCTCATGGAGCAGTTTGTCCTGATTGTACCCGATCTAGATGACAT
                      ____________________________________________________________
consensus CGACCGAGCAGAGCTGCTCATGGAGCAGTTTGTCCTGATTGTACCCGATCTAGATGACAT
 
. : . : . : . : . : . :
JMFS019F04+ TTTCCAAGACTCTTTCCCTTTGATTTCTTGAACTTGTGTTTTTTCACTCCAATTAATTCC
JMFS088H08+ TTTCCAAGACTCTTTCCCTTTGATTTCTTGAACTTGTGTTTTTTCACTCCAATTAATTCC
                      ____________________________________________________________
consensus TTTCCAAGACTCTTTCCCTTTGATTTCTTGAACTTGTGTTTTTTCACTCCAATTAATTCC
 
. : . : . : . : . : . :
JMFS019F04+ TCAGTTGATCCCAGCCCATATAGCAGGAACATCAATTTGTAGATATTCCAAACAAAAGCA
JMFS088H08+ TCAGTTGATCCCAGCCCATATAGCAGGAACATCAATTTGTAGATATTCCAAACAAAAGCA
                      ____________________________________________________________
consensus TCAGTTGATCCCAGCCCATATAGCAGGAACATCAATTTGTAGATATTCCAAACAAAAGCA
 
. : . : . : . : . : . :
JMFS019F04+ AAGCCCTTCTGGATTAGGAACCATGAAAGCTGGCAGAGATTCCACTTTTTACTCAATAGC
JMFS088H08+ AAGCCCTTCTGGATTAGGAACCATGAAAGCTGGCAGAGATTCCACTTTTTACTCAATAGC
                      ____________________________________________________________
consensus AAGCCCTTCTGGATTAGGAACCATGAAAGCTGGCAGAGATTCCACTTTTTACTCAATAGC
 
. : . : . : . : . : . :
JMFS019F04+ CCGCCAAAGTGGAGAGAACCGTCGGTGAAAATCGATTCCCCAACACAATTCTTCAATTCA
JMFS088H08+ CCGCCAAAGTGGAGAGAACCGTCGGTGAAAATCGATTCCCCAACACAATTCTTCAATTCA
                      ____________________________________________________________
consensus CCGCCAAAGTGGAGAGAACCGTCGGTGAAAATCGATTCCCCAACACAATTCTTCAATTCA
 
. : . : . : . : . : . :
JMFS019F04+ ACTTGGTTAATTTCCTCCACAAATCATTTGTAACCCCTCAAACTCCAGAAATTCGAACTA
JMFS088H08+ ACTTGGTTAATTTCCTCCACAAATCATTTGTAACCCCTCAAACTCCAGAAATTCGAACTA
                      ____________________________________________________________
consensus ACTTGGTTAATTTCCTCCACAAATCATTTGTAACCCCTCAAACTCCAGAAATTCGAACTA
 
. : . : . : . : . : . :
JMFS019F04+ GTTTAACC
JMFS088H08+ GTTTAACCTAAGTCGAATTTTATCTTTATCCTTAAATTAATCCCACAAGACAGACGAAAG
                      ____________________________________________________________
consensus GTTTAACCTAAGTCGAATTTTATCTTTATCCTTAAATTAATCCCACAAGACAGACGAAAG
 
. : . : . : . : . : . :
JMFS088H08+ AACTACTGCTACGGATAGATTGCATACAGGATACAGCTCAAGGAGAGAGCGGCGCGTGGT
                      ____________________________________________________________
consensus AACTACTGCTACGGATAGATTGCATACAGGATACAGCTCAAGGAGAGAGCGGCGCGTGGT
 
. : . : . : . : . : . :
JMFS088H08+ GAACTAACCGCTGAATTTACTACGTTGTCGGAGTGGGAGGCTATCAGTTTCGGACTTTCA
                      ____________________________________________________________
consensus GAACTAACCGCTGAATTTACTACGTTGTCGGAGTGGGAGGCTATCAGTTTCGGACTTTCA