Contig 010465:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010J09Sequence549010337 (8)ref|XP_009619069.1|6e-93PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]722010465 (3)ref|XP_004243182.1|4e-80PREDICTED: vam6/Vps39-like protein [Solanum lycopersicum]
JMFS064C09Sequence482010465 (3)ref|XP_004243182.1|1e-42PREDICTED: vam6/Vps39-like protein [Solanum lycopersicum]
JMSF023C06Sequence664010337 (8)ref|XP_009619069.1|4e-118PREDICTED: vam6/Vps39-like protein [Nicotiana tomentosiformis]711010465 (3)ref|XP_004243182.1|4e-79PREDICTED: vam6/Vps39-like protein [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023C06+ AAACCGCTTTAAGAAAATTGCAGAAA
rJMFF010J09+ ACTCAGGGGAAACCGCTTTAAGAAAATTGCAGAAA
                      ____________________________________________________________
consensus ACTCAGGGGAAACCGCTTTAAGAAAATTGCAGAAA
 
. : . : . : . : . : . :
rJMSF023C06+ TTGAAGGTGCTGAGGACACTCGAATCAGTCCAAGTGGCACAGATAGTAATAAGAGTGACG
rJMFF010J09+ TTGAAGGTGCTGAGGACACTCGAATCAGTCCAAGTGGCACAGATAGTAATAAGAGTGACG
                      ____________________________________________________________
consensus TTGAAGGTGCTGAGGACACTCGAATCAGTCCAAGTGGCACAGATAGTAATAAGAGTGACG
 
. : . : . : . : . : . :
rJMSF023C06+ GTGATGTAGACGATATTGGTGAGGAAGGAGTTTCTACTATTATGCTTGATCAGGTCCTTG
rJMFF010J09+ GTGATGTAGACGATATTGGTGAGGAAGGAGTTTCTACTATTATGCTTGATCAGGTCCTTG
                      ____________________________________________________________
consensus GTGATGTAGACGATATTGGTGAGGAAGGAGTTTCTACTATTATGCTTGATCAGGTCCTTG
 
. : . : . : . : . : . :
rJMSF023C06+ ATCTGTTGGGACGAAGGTGGGACCGAATCAATGGAGCTCAGGCCTTGAAAATCTTACCAC
rJMFF010J09+ ATCTGTTGGGACGAAGGTGGGACCGAATCAATGGAGCTCAGGCCTTGAAAATCTTACCAC
                      ____________________________________________________________
consensus ATCTGTTGGGACGAAGGTGGGACCGAATCAATGGAGCTCAGGCCTTGAAAATCTTACCAC
 
. : . : . : . : . : . :
rJMSF023C06+ GGGAGACCAAATTGGAGAACTTGCTTCCGTTTCTTGGACCTCTTCTGAGAAAATCAAGTG
rJMFF010J09+ GGGAGACCAAATTGGAGAACTTGCTTCCGTTTCTTGGACCTCTTCTGAGAAAATCAAGTG
JMFS064C09- TG
                      ____________________________________________________________
consensus GGGAGACCAAATTGGAGAACTTGCTTCCGTTTCTTGGACCTCTTCTGAGAAAATCAAGTG
 
. : . : . : . : . : . :
rJMSF023C06+ AAGCACACCGAAACTTTTCAGTGATCAGGAGTTTGAGGGAGAGTGAAAACCTACAGGTGA
rJMFF010J09+ AAGCACACCGAAACTTTTCAGTGATCAGGAGTTTGAGGGAGAGTGAAAACCTACAGGTGA
JMFS064C09- AAGCACACCGAAACTTTTCAGTGATCAGGAGTTTGAGGGAGAGTGAAAACCTACAGGTGA
                      ____________________________________________________________
consensus AAGCACACCGAAACTTTTCAGTGATCAGGAGTTTGAGGGAGAGTGAAAACCTACAGGTGA
 
. : . : . : . : . : . :
rJMSF023C06+ AAGATGAGCTCTATACCCAGAGGAAAGCAGTGGTGAAGATCAACGGTGATAGCATGTGCT
rJMFF010J09+ AAGATGAGCTCTATACCCAGAGGAAAGCAGTGGTGAAGATCAACGGTGATAGCATGTGCT
JMFS064C09- AAGATGAGCTCTATACCCAGAGGAAAGCAGTGGTGAAGATCAACGGTGATAGCATGTGCT
                      ____________________________________________________________
consensus AAGATGAGCTCTATACCCAGAGGAAAGCAGTGGTGAAGATCAACGGTGATAGCATGTGCT
 
. : . : . : . : . : . :
rJMSF023C06+ CTCTTTGCAACAAGAAGATAGGGACGAGTGTTTTTGCTGTGTATCCAAATGGCAAGACAA
rJMFF010J09+ CTCTTTGCAACAAGAAGATAGGGACGAGTGTTTTTGCTGTGTATCCAAATGGCAAGACAA
JMFS064C09- CTCTTTGCAACAAGAAGATAGGGACGAGTGTTTTTGCTGTGTATCCAAATGGCAAGACAA
                      ____________________________________________________________
consensus CTCTTTGCAACAAGAAGATAGGGACGAGTGTTTTTGCTGTGTATCCAAATGGCAAGACAA
 
. : . : . : . : . : . :
rJMSF023C06+ TTGTACACTTCGTTTGCTTTAAAGATTCGCAGAGCATGAAAGCTGTTACAAGGGGCTCTC
rJMFF010J09+ TTGTACACTTCGTTTGCTTTAAAGATTCGCAGAGCATGAAAGCTGTTACAAGGGGCTCTC
JMFS064C09- TTGTACACTTCGTTTGCTTTAAAGATTCGCAGAGCATGAAAGCTGTTACAAGGGGCTCTC
                      ____________________________________________________________
consensus TTGTACACTTCGTTTGCTTTAAAGATTCGCAGAGCATGAAAGCTGTTACAAGGGGCTCTC
 
. : . : . : . : . : . :
rJMSF023C06+ AGTCGCGCAAGAGATGAGTGCAAAATAGCAAACCTTGTACGCTTTGTCTGGTTTAGAGAT
rJMFF010J09+ AGTCGCGCAAGAGATGAGTGCAAAATAGCAAACCTTGTACGCTTTGTCTGGTTTAGAGAT
JMFS064C09- AGTCGCGCAAGAGATGAGTGCAAAATAGCAAACCTTGTACGCTTTGTCTGGTTTAGAGAT
                      ____________________________________________________________
consensus AGTCGCGCAAGAGATGAGTGCAAAATAGCAAACCTTGTACGCTTTGTCTGGTTTAGAGAT
 
. : . : . : . : . : . :
rJMSF023C06+ TTGCAGAACATGAAAGATGTTACAAGGGACACTCTCAGTCGTCGCGCCAGAGAGGAGCGC
rJMFF010J09+ TTGCAGAACATGAAAGATGTTACAAGGGACACTCTCAGTCGTCGCGCCAGAGAGGAGCGC
JMFS064C09- TTGCAGAACATGAAAGATGTTACAAGGGACACTCTCAGTCGTCGCGCCAGAGAGGAGCGC
                      ____________________________________________________________
consensus TTGCAGAACATGAAAGATGTTACAAGGGACACTCTCAGTCGTCGCGCCAGAGAGGAGCGC
 
. : . : . : . : . : . :
rJMSF023C06+ AAAATAGCAACCTTGTTCTCATGTATTACAGTTGCCATAAGTTTTGTGCAATTTAATGTG
rJMFF010J09+ AAAATAGCAACCTTGTTCTCATGTATTACAGTTGCCATAAGTTTTGTGCAATTTAATGTG
JMFS064C09- AAAATAGCAACCTTGTTCTCATGTATTACAGTTGCCATAAGTTTTGTGCAATTTAATGTG
                      ____________________________________________________________
consensus AAAATAGCAACCTTGTTCTCATGTATTACAGTTGCCATAAGTTTTGTGCAATTTAATGTG
 
. : . : . : . : . : . :
rJMSF023C06+ TGGTGTCAGGTGTGTTGTAAGAT
rJMFF010J09+ TGGTGTCAGGTGTGTTGTAAGAT
JMFS064C09- TGGTGTCAGGTGTGTTGTAAGATTATCTGAAAATGCGATTTTAAATTATTTGCGGTTTTG
                      ____________________________________________________________
consensus TGGTGTCAGGTGTGTTGTAAGATTATCTGAAAATGCGATTTTAAATTATTTGCGGTTTTG