Contig 010412:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038O19Sequence136010412 (10)716019146ref|XP_009592301.1|5e-59PREDICTED: serine/threonine-protein kinase CTR1-like [Nicotiana tomentosiformis
JMFS014B06Sequence566010412 (10)ref|XP_006341169.1|5e-16PREDICTED: serine/threonine-protein kinase CTR1-like [Solanum tuberosum]
JMFS095C04Sequence524010412 (10)ref|XP_006341169.1|4e-16PREDICTED: serine/threonine-protein kinase CTR1-like [Solanum tuberosum]
JMFS110F11Sequence624010412 (10)ref|XP_006341169.1|1e-92PREDICTED: serine/threonine-protein kinase CTR1-like [Solanum tuberosum]
JMFS165F03Sequence494010412 (10)ref|XP_006341169.1|3e-16PREDICTED: serine/threonine-protein kinase CTR1-like [Solanum tuberosum]
JMSF013L06Sequence167010412 (10)756005742 (4)gb|KDO36750.1|6e-106hypothetical protein CISIN_1g027225mg [Citrus sinensis]
JMSF030A05Sequence140010412 (10)
JMSF034P12Sequence114010412 (10)664005742 (4)gb|KDO36750.1|2e-55hypothetical protein CISIN_1g027225mg [Citrus sinensis]
JMSF038D22Sequence214010412 (10)897005742 (4)gb|KDO36750.1|7e-115hypothetical protein CISIN_1g027225mg [Citrus sinensis]
JMSF045O07Sequence135010412 (10)753005742 (4)gb|KDO36750.1|6e-75hypothetical protein CISIN_1g027225mg [Citrus sinensis]

Alignment

This contig is upended


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JMFS110F11+                                              AACCAAGTCAGTTTCTCCAGCAGAA
                      ____________________________________________________________
consensus                                                AACCAAGTCAGTTTCTCCAGCAGAA
 
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JMFS110F11+           GCTGCGCCCCCCATGTGATTGCAAACAAGCTTTGCAAGCTGGTCAACAACCTCTTTTGTT
                      ____________________________________________________________
consensus             GCTGCGCCCCCCATGTGATTGCAAACAAGCTTTGCAAGCTGGTCAACAACCTCTTTTGTT
 
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JMFS110F11+           GTGATGCAACTAGGGGACAGATTATGAATGCGATTTTGTAATTCCTTTAAGCTGGGATCA
                      ____________________________________________________________
consensus             GTGATGCAACTAGGGGACAGATTATGAATGCGATTTTGTAATTCCTTTAAGCTGGGATCA
 
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JMFS110F11+           GTACGTCGATCAATCAAAGTCACTTCAACTGAAGGTAGTATGGATGGATCAGCAGCCTTT
                      ____________________________________________________________
consensus             GTACGTCGATCAATCAAAGTCACTTCAACTGAAGGTAGTATGGATGGATCAGCAGCCTTT
 
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JMFS110F11+           AATGATTCAAGTGATGGAATACGCCCACTTTCTTGCAGATCAGAGCAAACAATCCACACA
                      ____________________________________________________________
consensus             AATGATTCAAGTGATGGAATACGCCCACTTTCTTGCAGATCAGAGCAAACAATCCACACA
 
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JMFS110F11+           TATGGATCCATCCCATGAATCAAGTAAAAGCCATCAGGAATTTTGTCAAAGTATGATAAG
                      ____________________________________________________________
consensus             TATGGATCCATCCCATGAATCAAGTAAAAGCCATCAGGAATTTTGTCAAAGTATGATAAG
 
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JMFS110F11+           CATCCATTTACCCAGAATCTATGCGACATGGCCTCTGCTGAGACAGTTAAAGCTGAAGAC
                      ____________________________________________________________
consensus             CATCCATTTACCCAGAATCTATGCGACATGGCCTCTGCTGAGACAGTTAAAGCTGAAGAC
 
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JMFS110F11+           CTTGATGCCGGCTCATCTGGCACGGGATCCAAAAAGTTGGGATCCTCTGCACAGGTAGCT
                      ____________________________________________________________
consensus             CTTGATGCCGGCTCATCTGGCACGGGATCCAAAAAGTTGGGATCCTCTGCACAGGTAGCT
 
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JMFS110F11+           TCTGAGGAAAGCCGTAACGCCAGCGCGAGCTGCATCTGATAACTCTCTTCAGTTTGCTGC
                      ____________________________________________________________
consensus             TCTGAGGAAAGCCGTAACGCCAGCGCGAGCTGCATCTGATAACTCTCTTCAGTTTGCTGC
 
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JMFS110F11+           GCCCAACTCTTGGACGAAGATGAGCCACCACCGCCTACGGAGGAGACTTCCGCCGCTTTT
JMFS095C04+                                                   AGGAGACTTCCGCCGCTTTT
JMFS165F03+                                                   AGGAGACTTCCGCCGCTTTT
JMFS014B06+                                                   AGGAGACTTCCGCCGCTTTT
                      ____________________________________________________________
consensus             GCCCAACTCTTGGACGAAGATGAGCCACCACCGCCTACGGAGGAGACTTCCGCCGCTTTT
 
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JMFS110F11+           AGCCCACCAATACCGTCATTCAATTGCCCATAAGATGCATCGGGATTCGATAGCGACGG 
JMFS095C04+           AGCCCACCAATACCGTCATTCAATTGCCCATAAGATGCATCGGGATTCGATAGCGACGGT
JMFS165F03+           AGCCCACCAATACCGTCATTCAATTGCCCATAAGATGCATCGGGATTCGATAGCGACGGT
JMFS014B06+           AGCCCACCAATACCGTCATTCAATTGCCCATAAGATGCATCGGGATTCGATAGCGACGGT
                      ____________________________________________________________
consensus             AGCCCACCAATACCGTCATTCAATTGCCCATAAGATGCATCGGGATTCGATAGCGACGGT
 
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JMFS095C04+           ATGCAGTATTCCCCGGAGATGGAGCTCTCCCCGAAACTACTCCCGCTAGACTGCCTTTGC
JMFS165F03+           ATGCAGTATTCCCCGGAGATGGAGCTCTCCCCGAAACTACTCCCGCTAGACTGCCTCTGC
JMFS014B06+           ATGCAGTATTCCCCGGAGATGGAGCTCTCCCCGAAACTACTCCCGCTAGACTGCCTCTGC
                      ____________________________________________________________
consensus             ATGCAGTATTCCCCGGAGATGGAGCTCTCCCCGAAACTACTCCCGCTAGACTGCCTCTGC
 
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JMFS095C04+           AGAGCGATGGAAACCGGGTACCCGGAAGCCCCGATCCGACTCTGAGCTTGATTCATCCGA
JMFS165F03+           AGAGCGATGGAAACCGGGTACCCGGAAGCCCCGATCCGACTCTGAGCTTGATTCATCCGA
JMFS014B06+           AGAGCGATGGAAACCGGGTACCCGGAAGCCCCGATCCGACTCTGAGCTTGATTCATCCGA
                      ____________________________________________________________
consensus             AGAGCGATGGAAACCGGGTACCCGGAAGCCCCGATCCGACTCTGAGCTTGATTCATCCGA
 
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JMFS095C04+           TTATCAATCAAGTCAGAATCGGATCCTTTCCCCTTACTCTTCTCCCCAGACAGAGACTCG
JMFS165F03+           TTATCAATCAAGTCAGAATCGGATCCTTTCCCCTTACTCTTCTCCCCAGACAGAGACTCG
JMFS014B06+           TTATCAATCAAGTCAGAATCGGATCCTTTCCCCTTACTCTTCTCCCCAGACAGAGACTCG
                      ____________________________________________________________
consensus             TTATCAATCAAGTCAGAATCGGATCCTTTCCCCTTACTCTTCTCCCCAGACAGAGACTCG
 
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JMFS095C04+           TGATACGGCGCCCCAGCTGCAGCCCCCGCAATCTTGGGCAAAAGATGAGGCGGCGGCTGG
JMFS165F03+           TGATACGGCGCCCCAGCTGCAGCCCCCGCAATCTTGGGCAAAAGATGAGGCGGCGGCTGG
JMFS014B06+           TGATACGGCGCCCCAGCTGCAGCCCCCGCAATCTTGGGCAAAAGATGAGGCGGCGGCTGG
                      ____________________________________________________________
consensus             TGATACGGCGCCCCAGCTGCAGCCCCCGCAATCTTGGGCAAAAGATGAGGCGGCGGCTGG
 
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JMFS095C04+           TGGAAGTTATCATCCGGAATCTGATTCAACAAAGTATAATTCGATCGCCTACCCGGCATT
JMFS165F03+           TGGAAGTTATCGTCCGGAATCTGATTCAACAAAGTATAATTCGATCGCCTACCCGGCATT
JMFS014B06+           TGGAAGTTATCGTCCGGAATCTGATTCAACAAAGTATAATTCGATCGCCTACCCGGCATT
                      ____________________________________________________________
consensus             TGGAAGTTATCGTCCGGAATCTGATTCAACAAAGTATAATTCGATCGCCTACCCGGCATT
 
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JMSF034P12+                    AAAAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
JMFS095C04+           TCCATCGAAAAAAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
JMFS165F03+           TCCATCG--AAAAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
JMSF038D22+                      AAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
JMSF045O07+                     AAAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
JMSF013L06+                     AAAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
JMSF030A05+                     AAAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
JMFF038O19+                     AAAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
JMFS014B06+           TCCATCGAAAAAAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
                      ____________________________________________________________
consensus             TCCATCGAAAAAAAAAAAAAAAGTAAACCACTGAAATCCGAAATCAAAAAACCCTAGAAA
 
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JMSF034P12+           CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTC                  
JMFS095C04+           CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTCATCACCTCCTCTCACTGT
JMFS165F03+           CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTCATCACCTCCTCTCA    
JMSF038D22+           CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTCATCACCTCCTCTCACTGT
JMSF045O07+           CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTCATCACCTCCTCTCACTGT
JMSF013L06+           CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTCATCACCTCCTCTCACTGT
JMSF030A05+           CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTCATCACCTCCTCTCACTGT
JMFF038O19+           CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTCATCACCTCCTCTCACTGT
JMFS014B06+           CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTCATCACCTCCTCTCACTGT
                      ____________________________________________________________
consensus             CCCTAGCAATCACCATCTCAGTATCACTGATCCTCATCAGTCATCACCTCCTCTCACTGT
 
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JMFS095C04+           CCAGCTCTTATGGCGTTCA                                         
JMSF038D22+           CCAGCTCTTATGGCGTTCACACTTGTCGGAGAGAGGAAAGAAATTACTAT          
JMSF045O07+           CCAGCTCTTATGGCGTTCAC                                        
JMSF013L06+           CCAGCTCTTATGGCGTTCACACTTGTCGGAGAGAGGAAAGAAATTACTAT          
JMSF030A05+           CCAGCTCTTATGGCGTTCAC                                        
JMFF038O19+           CCAGCTCTTATGGCGTTCAC                                        
JMFS014B06+           CCAGCTCTTATGGCGTTCACACTTGTCGGAGAGAGGAAAGAAATTACTATGACGTTTTCA
                      ____________________________________________________________
consensus             CCAGCTCTTATGGCGTTCACACTTGTCGGAGAGAGGAAAGAAATTACTATGACGTTTTCA