| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007N22 | Sequence | 554 | 010410 (10) | ref|XP_004159873.1| | 2e-33 | PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subu | |||||
| JMFS010H07 | Sequence | 553 | 010410 (10) | ref|XP_004159873.1| | 5e-31 | PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subu | |||||
| JMFS015C02 | Sequence | 516 | 010410 (10) | ref|XP_004159873.1| | 4e-38 | PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subu | |||||
| JMFS018G02 | Sequence | 621 | 010410 (10) | ref|XP_009778631.1| | 2e-35 | PREDICTED: eukaryotic translation initiation factor 3 subunit C-like, partial [ | |||||
| JMFS052C05 | Sequence | 521 | 010410 (10) | gb|KGN57601.1| | 5e-15 | hypothetical protein Csa_3G223320 [Cucumis sativus] | |||||
| JMFS064A07 | Sequence | 640 | 010410 (10) | ref|XP_004159873.1| | 3e-34 | PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subu | |||||
| JMFS073A08 | Sequence | 627 | 010410 (10) | ref|XP_004159873.1| | 2e-34 | PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subu | |||||
| JMFS102D10 | Sequence | 561 | 010410 (10) | ref|XP_004159873.1| | 4e-32 | PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subu | |||||
| JMFS126H09 | Sequence | 626 | 010410 (10) | ref|XP_004159873.1| | 2e-34 | PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subu | |||||
| JMFS159A06 | Sequence | 519 | 010410 (10) | ref|XP_004159873.1| | 3e-31 | PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subu | |||||
This contig is upended
. : . : . : . : . : . :
JMFS018G02+ TATCCCAAGTGATTTGACTGGGATCCTTA
____________________________________________________________
consensus TATCCCAAGTGATTTGACTGGGATCCTTA
. : . : . : . : . : . :
JMFS018G02+ AACTGTTTATCCATAAGCTTGTCTTTCTTGCTCAGCATTTTCTCCCACCCTGTACCAGCT
____________________________________________________________
consensus AACTGTTTATCCATAAGCTTGTCTTTCTTGCTCAGCATTTTCTCCCACCCTGTACCAGCT
. : . : . : . : . : . :
JMFS018G02+ TCAGTTGACTCATCATGACCTTCATCCTCATCCTCTTCCTCAGACTCTGCTTTTGTTGGG
____________________________________________________________
consensus TCAGTTGACTCATCATGACCTTCATCCTCATCCTCTTCCTCAGACTCTGCTTTTGTTGGG
. : . : . : . : . : . :
JMFS018G02+ TCCTCTTCAAAGTCATCCTCCTCATCCTCATCTTCCTCATCTGAATCATCTTCACCCCCT
JMFS052C05+ TCCTCATNTGAATCATCTTCACCCCCT
____________________________________________________________
consensus TCCTCTTCAAAGTCATCCTCCTCATCCTCATCTTCCTCATCTGAATCATCTTCACCCCCT
. : . : . : . : . : . :
JMFS018G02+ TCATCCTCACTCTTTGGCGGATTCTTCCTATATGCATCAATAAGCTCCTCATATTGCTTG
JMFS052C05+ TCATCTTCACTCTTGGCGGGATTCTTCCTATATGCATCAATAAGCTCCTCATATGGCTTG
JMFS064A07+ G
____________________________________________________________
consensus TCATCTTCACTCTTTGGGGGATTCTTCCTATATGCATCAATAAGCTCCTCATATTGCTTG
. : . : . : . : . : . :
JMFS018G02+ TTATTTTTCTTTAACTTCTGTTTCATTGAATTCATGGCTTTGGCATTACTACTACTCATT
JMFS052C05+ -TATTTTTCTTTAACTTCTGTTTCATTGAATTCATGGCTTTGGCATTACTACTACTCATT
JMFS064A07+ -TATTTTTCTTTAACTTCTGTTTCATTGAATTCATGGCTTTGGCATTACTACTACTCATT
JMFS126H09+ TGTTTCATTGAATTCATGGCTTTGGCATTACTACTACTCATT
JMFS073A08+ CTGTTTCATTGAATTCATGGCTTTGGCATTACTACTACTCATT
____________________________________________________________
consensus -TATTTTTCTTTAACTTCTGTTTCATTGAATTCATGGCTTTGGCATTACTACTACTCATT
. : . : . : . : . : . :
JMFS018G02+ TTCTTCTTAGCTTCCTTATTCGCAAAGGCCTCACTAAGAAAATTCTCCAACATCACTAAA
JMFS052C05+ TTCTTCTTAGCTTCCTTATTCGCAAAGGCCTCACTAAGAAAATTCTCCAACATCACTAAA
JMFS015C02+ AGCTTCCTTATTCGCAAAGGCCTCACTAAGAAAATTCTCCAACATCACTAAA
JMFS064A07+ TTCTTCTTAGCTTCCTTATTCGCAAAGGCCTCACTAAGAAAATTCTCCAACATCACTAAA
JMFS126H09+ TTCTTCTTAGCTTCCTTATTCGCAAAGGCCTCACTAAGAAAATTCTCCAACATCACTAAA
JMFS102D10+ TCGCAAAGGCCTCACTAAGAAAATTCTCCAACATCACTAAA
JMFS073A08+ TTCTTCTTAGCTTCCTTATTCGCAAAGGCCTCACTAAGAAAATTCTCCAACATCACTAAA
JMFS159A06+ TCCAACATCACTAAA
JMFF007N22+ TAAGAAAATTCTCCAACATCACTAAA
JMFS010H07+ TCCAACATCACTAAA
____________________________________________________________
consensus TTCTTCTTAGCTTCCTTATTCGCAAAGGCCTCACTAAGAAAATTCTCCAACATCACTAAA
. : . : . : . : . : . :
JMFS018G02+ GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
JMFS052C05+ GCCTTTACGTAGAGATCAGGGATNTTCTGGGCATCTATTGTACGCATTACCTTCTNTAAC
JMFS015C02+ GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
JMFS064A07+ GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
JMFS126H09+ GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
JMFS102D10+ GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
JMFS073A08+ GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
JMFS159A06+ GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
JMFF007N22+ GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
JMFS010H07+ GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
____________________________________________________________
consensus GCCTTTACGTAGAGATCAGGTATCTTCTCTGCATCTATTGTACGCATTACCTTCTCTAAC
. : . : . : . : . : . :
JMFS018G02+ TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
JMFS052C05+ GGGNTAATGATCTGGTCAAAACTCTCNNGCAAGNNGACCCAGGCATTTATNTTCATGGCA
JMFS015C02+ TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
JMFS064A07+ TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
JMFS126H09+ TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
JMFS102D10+ TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
JMFS073A08+ TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
JMFS159A06+ TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
JMFF007N22+ TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
JMFS010H07+ TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
____________________________________________________________
consensus TGCTTATTGATCTTGTCAAAACTCTCTTGCAAGCTGACCCAGTCATTTATCTTCATGGCA
. : . : . : . : . : . :
JMFS018G02+ TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
JMFS052C05+ TTTTTCATTTGATCATCATGTGGAAGACATCTCTTCANACCGCTTGTCAGAACGTTTGAC
JMFS015C02+ TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
JMFS064A07+ TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
JMFS126H09+ TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
JMFS102D10+ TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
JMFS073A08+ TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
JMFS159A06+ TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
JMFF007N22+ TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
JMFS010H07+ TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
____________________________________________________________
consensus TTCTTCATTTGATCAACA-GTGGAAGACATCTCTTCATACCGCTTGTCAGAACGTTTGAC
. : . : . : . : . : . :
JMFS018G02+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAA
JMFS052C05+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
JMFS015C02+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
JMFS064A07+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
JMFS126H09+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
JMFS102D10+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
JMFS073A08+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
JMFS159A06+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
JMFF007N22+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
JMFS010H07+ GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
____________________________________________________________
consensus GACACGTCGATGCACATTTGAGTCATCACTATCAGACTCGGAATCAGATACAAGATACTT
. : . : . : . : . : . :
JMFS052C05+ GCTCTTATTTGCAGCATCAATTGAATCTACAGGTCTCTCAACCTCAATATCACTCTCCTC
JMFS015C02+ GCTCTTATTTGCAGCATCAATTGAATCTACAGGTTCTTCAACCTCAATATCACTCTCCTC
JMFS064A07+ GCTCTTATTTGCAGCATCAATTGAATCTACAGGTTCTTCAACCTCAATATCACTCTCCTC
JMFS126H09+ GCTCTTATTTGCAGCATCAATTGAATCTACAGGTTCTTCAACCTCAATATCACTCTCCTC
JMFS102D10+ GCTCTTATTTGCAGCATCAATTGAATCTACAGGTTCTTCAACCTCAATATCACTCTCCTC
JMFS073A08+ GCTCTTATTTGCAGCATCAATTGAATCTACAGGTTCTTCAACCTCAATATCACTCTCCTC
JMFS159A06+ GCTCTTATTTGCAGCATCAATTGAATCTACAGGTTCTTCAACCTCAATATCACTCTCCTC
JMFF007N22+ GCTCTTATTTGCAGCATCAATTGAATCTACAGGTTCTTCAACCTCAATATCACTCTCCTC
JMFS010H07+ GCTCTTATTTGCAGCATCAATTGAATCTACAGGTTCTTCAACCTCAATATCACTCTCCTC
____________________________________________________________
consensus GCTCTTATTTGCAGCATCAATTGAATCTACAGGTTCTTCAACCTCAATATCACTCTCCTC
. : . : . : . : . : . :
JMFS052C05+ CTCTTCACTTTCACT
JMFS015C02+ CTCTTCACTTTCACTGTCACCCCCCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATT
JMFS064A07+ CTCTTCACTTTCACTGTCACCCCCCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATT
JMFS126H09+ CTCTTCACTTTCACTGTCACCCCCCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATT
JMFS102D10+ CTCTTCACTTTCACTGTCACCCCCCTGAGTCCAACACCCCCATGCCATGTCTCAAAGATT
JMFS073A08+ CTCTTCACTTTCACTGTCACCCCCCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATT
JMFS159A06+ CTCTTCACTTTCACTGTCACCCCCCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATT
JMFF007N22+ CTCTTCACTTTCACTGTCACCCCCCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATT
JMFS010H07+ CTCTTCACTTTCACTGTCACCCCCCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATT
____________________________________________________________
consensus CTCTTCACTTTCACTGTCACCCCCCTGAGTCCAAAATCGGGATGCCATGTCTCAAAGATT
. : . : . : . : . : . :
JMFS015C02+ TGTTAAGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAG
JMFS064A07+ TGTTAAGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAG
JMFS126H09+ TGTTAAGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAG
JMFS102D10+ TGTTAAGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAG
JMFS073A08+ TGTTAAGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAG
JMFS159A06+ TGTTAAGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAG
JMFF007N22+ TGTTAAGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAG
JMFS010H07+ TGTTAAGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAG
____________________________________________________________
consensus TGTTAAGAGAATAATAAACTGGGGAGAACGTCCGTTGAAGGAGTGGATTCTTCAACCGAG
. : . : . : . : . : . :
JMFS015C02+ GACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGA
JMFS064A07+ GACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGA
JMFS126H09+ GACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGA
JMFS102D10+ GACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGA
JMFS073A08+ GACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGA
JMFS159A06+ GACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGA
JMFF007N22+ GACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGA
JMFS010H07+ GACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGA
____________________________________________________________
consensus GACGGAGATCCCGACGAGCTTGACGTCGACCTCTGCCGGAAGTCGAGAAAAGGGAGCGGA
. : . : . : . : . : . :
JMFS064A07+ CGCCGGAGTCGGAGAG
JMFS126H09+ CGCCGGAGTCGGAGAG-TGTAGGAAACTGTG-AGAGGGAGCGGCAGA
JMFS102D10+ CGCCGGAGTCGGAGAGCTGTAGGAAACTGTG-AGAGGGAGCG
JMFS073A08+ CGCCGGAGTCGGAGAG-TGTAGGAAACTGTG-AGAGGGAGCGGCAGA
JMFS159A06+ CGCCGGAGTCGGAGAG-TGTAGGAAA
JMFF007N22+ CGCCGGAGTCGGAGAG-TGTAGGAAACTGTG-AGAGGGAGCGGCAGACCTT
JMFS010H07+ CGCCGGAGTCGGAGAG-TGTAGGAAACTGTGNAGAGGGAGCGGCAGACCTTGACGTTTCT
____________________________________________________________
consensus CGCCGGAGTCGGAGAG-TGTAGGAAACTGTG-AGAGGGAGCGGCAGACCTTGACGTTTCT