Contig 010356:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031F17Sequence557010356 (3)ref|XP_002523859.1|3e-62short chain alcohol dehydrogenase, putative [Ricinus communis] gb|EEF38585.1| sh750010356 (3)ref|XP_002523859.1|3e-20short chain alcohol dehydrogenase, putative [Ricinus communis] gb|EEF38585.1| sh
JMFN009F15Sequence633010356 (3)ref|XP_011022234.1|9e-69PREDICTED: secoisolariciresinol dehydrogenase-like [Populus euphratica]

Alignment

This contig is upended


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rJMFF031F17- TTGAGAGTAAATAAAAGTGGGGTTAAGCTC
                      ____________________________________________________________
consensus TTGAGAGTAAATAAAAGTGGGGTTAAGCTC
 
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rJMFF031F17- TTTAAGTCTCAATACACACTAGTCTCAGTCCACAACCATCTAAGAAAAAGACATGCCTAC
                      ____________________________________________________________
consensus TTTAAGTCTCAATACACACTAGTCTCAGTCCACAACCATCTAAGAAAAAGACATGCCTAC
 
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rJMFF031F17- AACAGATGAAGTGGGGGGGTTTTCATGGCGAAGGGGAGGCAGAATCGGACATAACAGATC
                      ____________________________________________________________
consensus AACAGATGAAGTGGGGGGGTTTTCATGGCGAAGGGGAGGCAGAATCGGACATAACAGATC
 
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rJMFF031F17- TGGAATGAGATCTTGAAGATGGACTTGCACTCCTAGAATGGCTTCTAGAAGAGCAACTAT
                      ____________________________________________________________
consensus TGGAATGAGATCTTGAAGATGGACTTGCACTCCTAGAATGGCTTCTAGAAGAGCAACTAT
 
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rJMFF031F17- CATAACCACTTCTCCTAGAACTCTTCCTGGGACTCGGAGAAATGCTGCGATAGGAGCCTC
                      ____________________________________________________________
consensus CATAACCACTTCTCCTAGAACTCTTCCTGGGACTCGGAGAAATGCTGCGATAGGAGCCTC
 
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rJMFF031F17- TCAAGTCCTTTGATGGGGGGAGACGCTTCTCGAGTAGCTTCTTCTGCGGCGCCTTGGAGA
                      ____________________________________________________________
consensus TCAAGTCCTTTGATGGGGGGAGACGCTTCTCGAGTAGCTTCTTCTGCGGCGCCTTGGAGA
 
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rJMFF031F17- TACGCTGGGTGAGTAACTTCTCCTGTACCTTCGATACCTGGGTGGTGAGATACTCCGGGA
                      ____________________________________________________________
consensus TACGCTGGGTGAGTAACTTCTCCTGTACCTTCGATACCTGGGTGGTGAGATACTCCGGGA
 
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rJMFF031F17- GATTGAGCGATACCGTTGGCTTCTTCGGTAATAATAATCTCTATCATCAGGGGAGCGGTA
                      ____________________________________________________________
consensus GATTGAGCGATACCGTTGGCTTCTTCGGTAATAATAATCTCTATCATCAGGGGAGCGGTA
 
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rJMFF031F17- ACTGCTCCTCCTATAGTAGTAGCCATCATCAGGAGAACGGTACCTAGAGTAGTAAGGAGA
                      ____________________________________________________________
consensus ACTGCTCCTCCTATAGTAGTAGCCATCATCAGGAGAACGGTACCTAGAGTAGTAAGGAGA
 
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rJMFF031F17- GTTGGATGGGGAGTACACCTTCTCCAATTCCTCCTCACCGGAGAAGTTATAGAAACCACA
                      ____________________________________________________________
consensus GTTGGATGGGGAGTACACCTTCTCCAATTCCTCCTCACCGGAGAAGTTATAGAAACCACA
 
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rJMFF031F17- GGCCAACGGCGTCGCCACCAGGTGCGGCGACACGCAGTTGACTCGAATCCCGTACCGCCC
JMFF031F17+ CGTCGCCACCAGGTGCGGCGACACGCAGTTGACTCGAATCCCGTACCGCCC
JMFN009F15+ CGACACGCAGTTGACTCGAATCCCGTACCGCCC
                      ____________________________________________________________
consensus GGCCAACGGCGTCGCCACCAGGTGCGGCGACACGCAGTTGACTCGAATCCCGTACCGCCC
 
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rJMFF031F17- AAGGTCCACCGCCGTGCTCCTCGTCAGCCCCACCACTGCGTGCTTCGAGCTCGTGTACGC
JMFF031F17+ AAGGTCCACCGCCGTGCTCCTCGTCAGCCCCACCACTGCGTGCTTCGAGCTCGTGTACGC
JMFN009F15+ AAGGTCCACCGCCGTGCTCCTCGTCAGCCCCACCACTGCGTGCTTCGAGCTCGTGTACGC
                      ____________________________________________________________
consensus AAGGTCCACCGCCGTGCTCCTCGTCAGCCCCACCACTGCGTGCTTCGAGCTCGTGTACGC
 
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rJMFF031F17- GTGCG
JMFF031F17+ GTGCGTGGTGGCGCCGGCGATTACGGATGCCCCACTCGCCGTCGTGATTATGCATCCACG
JMFN009F15+ GTGCGTGGTGGCGCCGGCGATTACGGATGCCCCACTCGCCGTCGTGATTATGCATCCACG
                      ____________________________________________________________
consensus GTGCGTGGTGGCGCCGGCGATTACGGATGCCCCACTCGCCGTCGTGATTATGCATCCACG
 
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JMFF031F17+ CCGGTTCGGGTCTTCGGGATCATCACTCGAGCGGCGTGTTTGGTTCCTAGGAATGCGCCC
JMFN009F15+ CCGGTTCGGGTCTTCGGGATCATCACTCGAGCGGCGTGTTTGGTTCCTAGGAATGCGCCC
                      ____________________________________________________________
consensus CCGGTTCGGGTCTTCGGGATCATCACTCGAGCGGCGTGTTTGGTTCCTAGGAATGCGCCC
 
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JMFF031F17+ ACGAGGTTTGTTCTCACGACCTGCTCGAACTCGGAATTGTCGCTGTCGAGGATGCTG
JMFN009F15+ ACGAGGTTTGTTCTCACGACCTGCTCGAACTCGGAATTGTCGCTGTCGAGGATGCTGGGC
                      ____________________________________________________________
consensus ACGAGGTTTGTTCTCACGACCTGCTCGAACTCGGAATTGTCGCTGTCGAGGATGCTGGGC
 
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JMFN009F15+ TTGTTCAATCCTCCGATGCCGGCGTTATTGTACATCACGTCGAGCTTGCCGAACTTTGAG
                      ____________________________________________________________
consensus TTGTTCAATCCTCCGATGCCGGCGTTATTGTACATCACGTCGAGCTTGCCGAACTTTGAG
 
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JMFN009F15+ ACGGCAGTGTTGACGGCGTTTTCGACGTCAGCTTCCTTCGTCACGTCGCAGTGGACAAAG
                      ____________________________________________________________
consensus ACGGCAGTGTTGACGGCGTTTTCGACGTCAGCTTCCTTCGTCACGTCGCAGTGGACAAAG
 
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JMFN009F15+ GCGGCTGAACCGGACTCCAATTCGCCGCAAACTTTCCGTCTTAAATCGTCCTGAACGTCC
                      ____________________________________________________________
consensus GCGGCTGAACCGGACTCCAATTCGCCGCAAACTTTCCGTCTTAAATCGTCCTGAACGTCC
 
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JMFN009F15+ GCTATCACCACCTTAGCTCCGTGCCGGGAAAACAGTTTTGTCGTAGCTTTTCCGATGCCG
                      ____________________________________________________________
consensus GCTATCACCACCTTAGCTCCGTGCCGGGAAAACAGTTTTGTCGTAGCTTTTCCGATGCCG
 
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JMFN009F15+ CTGGCGGCGCCGGTGATCAGCGCCACCTTACCTTCTAGCCTTCTTACAAAGGTTGATGCC
                      ____________________________________________________________
consensus CTGGCGGCGCCGGTGATCAGCGCCACCTTACCTTCTAGCCTTCTTACAAAGGTTGATGCC
 
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JMFN009F15+ ATTGAGATCTTCCAAGGAATATAATGAACTGTGAAGAGAATTATTGTTGAGAACTTATGA
                      ____________________________________________________________
consensus ATTGAGATCTTCCAAGGAATATAATGAACTGTGAAGAGAATTATTGTTGAGAACTTATGA