Contig 010339:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022N11Sequence349010339 (10)ref|XP_008362409.1|87.4PREDICTED: uncharacterized protein LOC103426097 [Malus domestica]807010339 (10)ref|XP_009760893.1|203PREDICTED: uncharacterized protein LOC104213155 [Nicotiana sylvestris]
JMFF042N09Sequence618010339 (10)emb|CDP15933.1|8e-76unnamed protein product [Coffea canephora]610010339 (10)ref|XP_004251802.1|165PREDICTED: uncharacterized protein LOC101257837 [Solanum lycopersicum]
JMFF050N19Sequence602010339 (10)ref|XP_004251802.1|202PREDICTED: uncharacterized protein LOC101257837 [Solanum lycopersicum]560010339 (10)ref|XP_004251802.1|134PREDICTED: uncharacterized protein LOC101257837 [Solanum lycopersicum]
JMSF006P09Sequence166010339 (10)214009194 (4)ref|XP_002887304.1|6e-06hypothetical protein ARALYDRAFT_476174 [Arabidopsis lyrata subsp. lyrata] gb|EF
JMSF016O17Sequence240010339 (10)ref|XP_010099390.1|2e-20hypothetical protein L484_004817 [Morus notabilis] gb|EXB78115.1| hypothetical p737010339 (10)ref|XP_006350028.1|224PREDICTED: uncharacterized protein LOC102599925 [Solanum tuberosum]
JMSF051J16Sequence508010339 (10)ref|XP_008342797.1|175PREDICTED: uncharacterized protein LOC103405562 [Malus domestica]787004482 (26)gb|ABA81874.1|1e-118unknown [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF050N19-                           GGAGCAATGAAAATGGATAATCTTGCAATGAATTACATCAACA
rJMFF042N09-                           GGAGCAATGAAAATGGATAATCTTGCAATGAATTACATCAACA
rJMFF022N11-                                                      ATGAATTACATCAACA
                      ____________________________________________________________
consensus                              GGAGCAATGAAAATGGATAATCTTGCAATGAATTACATCAACA
 
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rJMFF050N19-          TACAACTTTATGGTCTGAATATTTCAT-GTTTCTAATTATGTTCTTCACCTATACATTTT
rJMFF042N09-          TACAACTTTATGGTCTGAATATTTCAT-GTTTCTAATTATGTTCTTCACCTATACATTTT
rJMSF016O17-            CAACTTTATGGNCTGAATATTTCATGGTTTCTAATTATGTTCTTCACCTATACATTTT
rJMFF022N11-          TACAACTTTATGGTCTGAATATTTCAT-GTTTCTAATTATGTTCTTCACCTATACATTTT
                      ____________________________________________________________
consensus             TACAACTTTATGGTCTGAATATTTCAT-GTTTCTAATTATGTTCTTCACCTATACATTTT
 
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rJMFF050N19-          GATAAATAAACAATGTAGCTATACATTTCGATAAATAAACATTGTAGCATTCTCAGATCC
rJMFF042N09-          GATAAATAAACAATGTAGCTATACATTTCGATAAATAAACATTGTAGCATTCTCAGATCC
rJMSF016O17-          GATAAATAAACAATGTAGCTATACATTTCGATAAATAAACATTGTAGCATTCTCAGATCC
rJMFF022N11-          GATAAATAAACAATGTAGCTATACATTTCGATAAATAAACATTGTAGCATTCTCAGATCC
                      ____________________________________________________________
consensus             GATAAATAAACAATGTAGCTATACATTTCGATAAATAAACATTGTAGCATTCTCAGATCC
 
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rJMFF050N19-          CCCAAACTCGACGATTTCTTTGAGGAGACAATAGAGATGTCAACTCAGATTCCCCATTTT
rJMFF042N09-          CCCAAACTCGACGATTTCTTTGAGGAGACAATAGAGATGTCAACTCAGATTCCCCATTTT
rJMSF016O17-          CCCAAACTCGACGATTTCTTTGAGGAGACAATAGAGATGTCAACTCAGATTCCCCATTTT
rJMFF022N11-          CCCAAACTCGACGATTTCTTTGAGGAGACAATAGAGATGTCAACTCAGATTCCCCATTTT
                      ____________________________________________________________
consensus             CCCAAACTCGACGATTTCTTTGAGGAGACAATAGAGATGTCAACTCAGATTCCCCATTTT
 
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rJMFF050N19-          GCAGAATCCTAAAACTTCTGCCTTCCATTGACCATCGAGTTCATTGGATGTGTCCCAAAC
rJMFF042N09-          GCAGAATCCTAAAACTTCTGCCTTCCATTGACCATCGAGTTCATTGGATGTGTCCCAAAC
rJMSF016O17-          GCAGAATCCTAAAACTTCTGCCTTCCATTGACCATCGAGTTCATTGGATGTGTCCCAAAC
rJMFF022N11-          GCAGAATCCTAAAACTTCTGCCTTCCATTGACCATCGAGTTCATTGGATGTGTCCCAAAC
                      ____________________________________________________________
consensus             GCAGAATCCTAAAACTTCTGCCTTCCATTGACCATCGAGTTCATTGGATGTGTCCCAAAC
 
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rJMFF050N19-          CGTGCGGAATAGTTATACTTCAGTCTTGGGTCCAGTAACCGTCAACGCTTCCTCAATGGC
rJMFF042N09-          CGTGCGGAATAGTTATACTTCAGTCTTGGGTCCAGTAACCGTCAACGCTTCCTCAATGGC
rJMSF016O17-          CGTGCGGAATAGTTATACTTCAGTCTTGGGTCCAGTAACCGTCAACGCTTCCTCAATGGC
rJMFF022N11-          CGTGCGGAATAGTTATACTTCAGTCTTGGGTCCAGTAACCGTCAACGCTTCCTCAATGGC
                      ____________________________________________________________
consensus             CGTGCGGAATAGTTATACTTCAGTCTTGGGTCCAGTAACCGTCAACGCTTCCTCAATGGC
 
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rJMFF050N19-          TTGGACAAAAGTCGCAATCTTGTATGTGAAAAACCCAACGAGCATTGGTATCAATTCAAG
rJMFF042N09-          TTGGACAAAAGTCGCAATCTTGTATGTGAAAAACCCAACGAGCATTGGTATCAATTCAAG
rJMSF016O17-          TTGGACAAAAGTCGCAATCTTGTATGTGCAAAACCCAACGAGCATTGGTATCAATTCAAG
rJMFF022N11-          TTGGACAAAAGTCGCAATCTTGTATGTGAAAAACCCAACGAGCATTGGTATCAATTCAAG
                      ____________________________________________________________
consensus             TTGGACAAAAGTCGCAATCTTGTATGTGAAAAACCCAACGAGCATTGGTATCAATTCAAG
 
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rJMFF050N19-          GTGCATTAGTCCATATTCGGGCACTACAATCCCGTTCCATCGGTTATAGAGCATGACCAG
rJMFF042N09-          GTGCATTAGTCCATATTCGGGCACTACAATCCCGTTCCATCGGTTATAGAGCATGACCAG
rJMSF016O17-          GTGCATTAGTCCATATTCGGGCACTACAATCCCGTTCCATCGGTTATAGAGCATGACCAG
rJMFF022N11-          GTGCATTAGTCCATATTCGGGCACTACAATCCCGTTCCATCGGTTATAGAGCATGACCAG
                      ____________________________________________________________
consensus             GTGCATTAGTCCATATTCGGGCACTACAATCCCGTTCCATCGGTTATAGAGCATGACCAG
 
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rJMFF050N19-          AACAACAGGAACCAATAGTCTCGGCTGCCCAACAGCTCCTTTTATAAGCGCTCTAGGTCC
rJMFF042N09-          AACAACAGGAACCAATAGTCTCGGCTGCCCAACAGCTCCTTTTATAAGCGCTCTAGGTCC
rJMSF016O17-          AACAACAGGAACCAATAGTCTCGGCTGCCCAACAGCTCCTTTTATAAGCGCTCTAGGTCC
rJMFF022N11-          AACAACAGGAACCAATAGTCTCGGCTGCCCAACAGCTCCTTTTATAAGCGCTCTAGGTCC
                      ____________________________________________________________
consensus             AACAACAGGAACCAATAGTCTCGGCTGCCCAACAGCTCCTTTTATAAGCGCTCTAGGTCC
 
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rJMFF050N19-          TTCTGTTTGTATGGAATCCACACTGTTTCCCAGCATGC                      
rJMFF042N09-          TTCTGTTTGTATGGAATCCACACTGTTTCCAAGCATGCGCATATACGCCAAAGAACCAAG
rJMSF016O17-          TTCTGTTTGTATGGAATCCACACTGTTTCCAAGCATGCGCATATACGCCAAAGAACCAAG
rJMFF022N11-          TTCTGTTTGTATGGAATCCACACTGTTTCCAAGCATGCGCATATACGCCAAAGAACCAAG
                      ____________________________________________________________
consensus             TTCTGTTTGTATGGAATCCACACTGTTTCCAAGCATGCGCATATACGCCAAAGAACCAAG
 
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rJMFF042N09-          CAGCCCAGCACCATAGCTCGCTGCAATT                                
rJMSF016O17-          CAGCCCAGCACCATAGCTCGCTGCAATTTCAGGAGAATAAGAAACATATGCTGATATCAG
rJMFF022N11-          CAGCCCAGCACCATAGCTCGCTGCAATTTCAGGAGAATAAGAAACATATGCTGATATCAG
                      ____________________________________________________________
consensus             CAGCCCAGCACCATAGCTCGCTGCAATTTCAGGAGAATAAGAAACATATGCTGATATCAG
 
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rJMSF016O17-          ACCAAAACCGCCAATGCCTAAGGTGAGCAGCTGCATTTTTTCTTTCAACTTAAGATACTG
rJMFF022N11-          ACCAAAACCGCCAATGCCTAAGGTGAGCAGCTGCATTTTTTCTTTCAACTTAAGATACTG
                      ____________________________________________________________
consensus             ACCAAAACCGCCAATGCCTAAGGTGAGCAGCTGCATTTTTTCTTTCAACTTAAGATACTG
 
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rJMSF016O17-          CTCAGCAGACTGGGCCGCC-AATACTTTGGGGTCCCCTTTTGATCGCCTCACCTCTCTGA
rJMFF022N11-          CTCAGCAGACTGGGCCGCCAAATACTTTGGGGTCCCCTTTTGATCGCCTCACCTCTCTGA
JMFF042N09+                                                                     GA
                      ____________________________________________________________
consensus             CTCAGCAGACTGGGCCGCCAAATACTTTGGGGTCCCCTTTTGATCGCCTCACCTCTCTGA
 
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rJMSF016O17-          ACATCACATCACTGCCACCC                                        
rJMFF022N11-          ACATCACATCACTGCCACCCGTGGCTGCCTTGGTAGCTTTCTCCCACTTCTCTTGCTCGC
JMFF042N09+           ACATCACATCACTGCCACCCGTGGCTGCCTT-GTAGCTTTCTCCCACTTCTCTTGCTCGC
                      ____________________________________________________________
consensus             ACATCACATCACTGCCACCCGTGGCTGCCTTGGTAGCTTTCTCCCACTTCTCTTGCTCGC
 
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rJMFF022N11-          GCTTT                                                       
JMFF042N09+           GCTTTGTTGGAGCCGGTCTCCATTTCCGAGACGTGCCTTTGCTAGTTCGAGTTTCCTCAG
JMFF050N19+                   GGAGCCGGTCTCCATTTCCGAGACGTGCCTTGNCTAGTTCGAGTTTCCTCAG
                      ____________________________________________________________
consensus             GCTTTGTTGGAGCCGGTCTCCATTTCCGAGACGTGCCTTTGCTAGTTCGAGTTTCCTCAG
 
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JMFF042N09+           CTTTTTCTTCTAGGAAAGGTCTCGAAGGTGCTGCAAGTTCCTTGCTCAAATCAACTTCCA
JMSF051J16+             TTTTCTTNTAGGAAAGGCCTCGAAGGTGCTGCAAGTTCCTTGCTCAAATCAACNTCCA
JMFF050N19+           C-TTTTCTTCTAGGAAAGGTCTCGAAGGTGCTGCAAGTTCCTTGCTCAAATCAACTTCCA
                      ____________________________________________________________
consensus             CTTTTTCTTCTAGGAAAGGTCTCGAAGGTGCTGCAAGTTCCTTGCTCAAATCAACTTCCA
 
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JMFF042N09+           TGCTGTCAAGGCTCATGACCCGGTTTATACTTAGAAATCCAGATTCCTCTTCCTTTGGAG
JMSF051J16+           TGCTGTCAAGGCTCATGACCCGGTTTATACTTAGAAATCCAGATTCCTCTTCCTTTGGAG
JMFF050N19+           TGCTGTCAAGGCTCATGACCCGGTTTATACTTAGAAATCCAGATTCCTCTTCCTTTGGAG
                      ____________________________________________________________
consensus             TGCTGTCAAGGCTCATGACCCGGTTTATACTTAGAAATCCAGATTCCTCTTCCTTTGGAG
 
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JMFF042N09+           GAGCAGAGGGGGGATTAGAAGCAGTTTGAGCAGGGTCCTGAATGAGCTTCTTCATACGGT
JMSF051J16+           GAGCAGAGGGGGGATTAGAAGCAGTNTGAGCAGGGTCNTGAATGAGCTTCTTCATACGGT
JMFF050N19+           GAGCAGAGGGGGGATTAGAAGCAGTTTGAGCAGGGTCCTGAATGAGCTTCTTCATACGGT
                      ____________________________________________________________
consensus             GAGCAGAGGGGGGATTAGAAGCAGTTTGAGCAGGGTCCTGAATGAGCTTCTTCATACGGT
 
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JMFF042N09+           CCATGAATTCTTTGTTCCATATAAAATCATCGGAGGTGAGAGGGTCCTCATCGCCGCCCC
JMSF051J16+           CCANGAANTCTTTGTTCCATATAAAATCATCGGAGGTGAGAGGGTCCTCATCGCCGCCCC
JMFF022N11+                   TCTTTGTTCCATATAAAATCATCGGAGGTGAGAGGGTCCTCATCNCCGCCCC
JMFF050N19+           CCATGAATTCTTTGTTCCATATAAAATCATCGGAGGTGAGAGGGTCCTCATCGCCGCCCC
                      ____________________________________________________________
consensus             CCATGAATTCTTTGTTCCATATAAAATCATCGGAGGTGAGAGGGTCCTCATCGCCGCCCC
 
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JMFF042N09+           AGTACTTGCGGAGCTTGGTGGTGGTGGGTGGGCCGCCGTACTCCCCCGGTGCCACCCCGG
JMSF051J16+           AGTACTTGCGGAGCTTGGTGGTGGTGGGTGGGCCGCCGTACTCCCCCGGTGCCACCCCGG
JMFF022N11+           AGTACTTGCGGAGNTTGGTGGTGGTGGGTGGGCCGCCGTACTCCCCCGGTGCCACCCCGG
JMSF016O17+                  GCGGAGCTTGGTGGTGGTGGGTGGGCCGCCGTACTCCCCCGGTGCCACCCCGG
JMFF050N19+           AGTACTTGCGGAGCTTGGTGGTGGTGGGTGGGCCGCCGTACTCCCCCGGTGCCACCCCGG
                      ____________________________________________________________
consensus             AGTACTTGCGGAGCTTGGTGGTGGTGGGTGGGCCGCCGTACTCCCCCGGTGCCACCCCGG
 
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JMFF042N09+           TGGACCATTTCATTGGCTTCTTCTTTGGCAGTACAATTTTGGTCGGCCTTGGCTGCGACG
JMSF051J16+           TGGACCATNTCATTGGCTTCTTCTTTGGCAGTACAATTTTGGTCGGCCTTGGNTGCGACG
JMFF022N11+           TGGACCANNTCANTGGCTTCTTCTTTGGCAGTACAATTTTGGTCGGCCNTGGNTGCGACG
JMSF006P09+                                TCTTTGGCAGTACAATTTTGGTCGGCCTNGGNTGCGACG
JMSF016O17+           TGGACCATTTCATTGGCTTCTTCTTTGGCAGTACAATTTTGGTCGGCCTTGGCTGCGACG
JMFF050N19+           TGGACCATTTCATTGGCTTCTTCTTTGGCAGTACAATTTTGGTCGGCCTTGGCTGCGACG
                      ____________________________________________________________
consensus             TGGACCATTTCATTGGCTTCTTCTTTGGCAGTACAATTTTGGTCGGCCTTGGCTGCGACG
 
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JMFF042N09+           GTGCCTCGCCTGAGTCTTGAGATATGGGCGTAGACGCGGCGGCGGTCACCGTCAGGTAGC
JMSF051J16+           GTGCCTCGCNTGAGTCTTGAGATATGGGCGTAGACGCGGNGGCGGTCACCGTCAGGTAGC
JMFF022N11+           GTGCCTCGCNNGAGTCTTGAGATATGGGCGTAGACGCGGCGGCGGTCACCGTCAGGTAGC
JMSF006P09+           GTGCCTCGCCTGAGTCTTGAGATATGGGCGTAGACGCGGCGGCGGTCACCGTCAGGTAGC
JMSF016O17+           GTGCCTCGCCTGAGTCTTGAGATATGGGCGTAGACGCGGCGGCGGTCACCGTCAGGTAGC
JMFF050N19+           GTGCCTCGCCTGAGTCTTGAGATATGGGCGTAGACGCGGCGGCGGTCACCGTCAGGTAGC
                      ____________________________________________________________
consensus             GTGCCTCGCCTGAGTCTTGAGATATGGGCGTAGACGCGGCGGCGGTCACCGTCAGGTAGC
 
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JMFF042N09+           AGTTCAATACCACCATTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTCTCTCT   
JMSF051J16+           ANTTCAATACCACCATTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTG
JMFF022N11+           AGTTCAATACCNCCANTCTCTCTCTCTCTA--TCTCTCTCTCTCTCTCTCTCTCTCTCTG
JMSF006P09+           AGTTCAATACCACCATTCTCTCTCTCTCTA--TCTCTCTCTCTCTCTCTCTCTCTCTCTG
JMSF016O17+           AGTTCAATACCACCATTCTCTCTCTCTCTA--TCTCTCTCTCTCTCTCTCTCTCTCTCTG
JMFF050N19+           AGTTCAATACCACCATTCTCTCTCTCTCTA--TCTCTCTCTCTCTCTCTCTCTCTCTCTG
                      ____________________________________________________________
consensus             AGTTCAATACCACCATTCTCTCTCTCTCTA--TCTCTCTCTCTCTCTCTCTCTCTCTCTG
 
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JMSF051J16+           TTATTTGCGTGGAGAGAAATGGAGATGAC                               
JMFF022N11+           TTATTTGCGTGGAGAGAAATGGAGATGACGGAAAATATCCTGGTGGGTTCTCAGTAC   
JMSF006P09+           TTATTTGC                                                    
JMSF016O17+           TTATTTGC                                                    
JMFF050N19+           TTATTTGCGTGGAGAGAAATGGAGATGACGGAAAATATCCTGGTGGGTTCTCAGTACCGG
                      ____________________________________________________________
consensus             TTATTTGCGTGGAGAGAAATGGAGATGACGGAAAATATCCTGGTGGGTTCTCAGTACCGG